RNA–Protein interactions for RNA: ENST00000557713.5

SCFD1-224, Transcript of sec1 family domain containing 1, humanhuman

TSL 4

Gene SCFD1, Length 556 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-224ENST00000557713 ATP13A5Q4VNC0 1218 aa15.66■□□□□ 0.1
SCFD1-224ENST00000557713 TEX44Q53QW1 395 aa15.66■□□□□ 0.1
SCFD1-224ENST00000557713 CACHD1Q5VU97 1274 aa15.66■□□□□ 0.1
SCFD1-224ENST00000557713 B4GALNT4Q76KP1 1039 aa15.66■□□□□ 0.1
SCFD1-224ENST00000557713 RASGRP3Q8IV61 690 aa15.66■□□□□ 0.1
SCFD1-224ENST00000557713 TRAF3IP1Q8TDR0 691 aaPredicted RBP15.66■□□□□ 0.1
SCFD1-224ENST00000557713 ZDHHC12Q96GR4 267 aa15.66■□□□□ 0.1
SCFD1-224ENST00000557713 ELMO2Q96JJ3 720 aa15.66■□□□□ 0.1
SCFD1-224ENST00000557713 MAK16Q9BXY0 300 aaKnown RBP15.66■□□□□ 0.1
SCFD1-224ENST00000557713 BPIFA1Q9NP55 256 aa15.66■□□□□ 0.1
SCFD1-224ENST00000557713 TP53TG5Q9Y2B4 290 aa15.66■□□□□ 0.1
SCFD1-224ENST00000557713 WDR37Q9Y2I8 494 aa15.66■□□□□ 0.1
SCFD1-224ENST00000557713 ZNF106Q9H2Y7 1883 aaKnown RBP15.65■□□□□ 0.1
SCFD1-224ENST00000557713 SYCE3A1L190 88 aa15.65■□□□□ 0.1
SCFD1-224ENST00000557713 PPP1R12AO14974 1030 aaPredicted RBP15.65■□□□□ 0.1
SCFD1-224ENST00000557713 KCNJ13O60928 360 aa15.65■□□□□ 0.1
SCFD1-224ENST00000557713 ZFXP17010 805 aaPredicted RBP15.65■□□□□ 0.1
SCFD1-224ENST00000557713 NELFEP18615 380 aaKnown RBP15.65■□□□□ 0.1
SCFD1-224ENST00000557713 HMGCLP35914 325 aa15.65■□□□□ 0.1
SCFD1-224ENST00000557713 ARHGAP25P42331 645 aa15.65■□□□□ 0.1
SCFD1-224ENST00000557713 KLRB1Q12918 225 aa15.65■□□□□ 0.1
SCFD1-224ENST00000557713 CCDC70Q6NSX1 233 aa15.65■□□□□ 0.1
SCFD1-224ENST00000557713 TCTN3Q6NUS6 607 aa15.65■□□□□ 0.1
SCFD1-224ENST00000557713 FAM92BQ6ZTR7 304 aa15.65■□□□□ 0.1
SCFD1-224ENST00000557713 DTX3LQ8TDB6 740 aa15.65■□□□□ 0.1
SCFD1-224ENST00000557713 CXorf40BQ96DE9 158 aa15.65■□□□□ 0.1
SCFD1-224ENST00000557713 STAMBPL1Q96FJ0 436 aa15.65■□□□□ 0.1
SCFD1-224ENST00000557713 TEKT5Q96M29 485 aa15.65■□□□□ 0.1
SCFD1-224ENST00000557713 TRIM10Q9UDY6 481 aa15.65■□□□□ 0.1
SCFD1-224ENST00000557713 KCND3Q9UK17 655 aa15.65■□□□□ 0.1
SCFD1-224ENST00000557713 PADI1Q9ULC6 663 aa15.65■□□□□ 0.1
SCFD1-224ENST00000557713 PCDHGA6Q9Y5G7 932 aa15.65■□□□□ 0.1
SCFD1-224ENST00000557713 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP15.65■□□□□ 0.1
SCFD1-224ENST00000557713 A0A0A6YYK5 440 aaPredicted RBP15.64■□□□□ 0.09
SCFD1-224ENST00000557713 LOC285095A0A1B0GVY8 99 aa15.64■□□□□ 0.09
SCFD1-224ENST00000557713 PMPCBO75439 489 aa15.64■□□□□ 0.09
SCFD1-224ENST00000557713 KATNA1O75449 491 aa15.64■□□□□ 0.09
SCFD1-224ENST00000557713 CCNYL3P0C7X3 344 aa15.64■□□□□ 0.09
SCFD1-224ENST00000557713 VCLP18206 1134 aa15.64■□□□□ 0.09
SCFD1-224ENST00000557713 PTPN3P26045 913 aa15.64■□□□□ 0.09
SCFD1-224ENST00000557713 LRRC38Q5VT99 294 aa15.64■□□□□ 0.09
SCFD1-224ENST00000557713 IRGCQ6NXR0 463 aa15.64■□□□□ 0.09
SCFD1-224ENST00000557713 TMEM135Q86UB9 458 aa15.64■□□□□ 0.09
SCFD1-224ENST00000557713 PPP1R3BQ86XI6 285 aa15.64■□□□□ 0.09
SCFD1-224ENST00000557713 RFX6Q8HWS3 928 aa15.64■□□□□ 0.09
SCFD1-224ENST00000557713 TTC30BQ8N4P2 665 aa15.64■□□□□ 0.09
SCFD1-224ENST00000557713 BRSK1Q8TDC3 778 aa15.64■□□□□ 0.09
SCFD1-224ENST00000557713 MIB2Q96AX9 1013 aa15.64■□□□□ 0.09
SCFD1-224ENST00000557713 RNF25Q96BH1 459 aaPredicted RBP15.64■□□□□ 0.09
SCFD1-224ENST00000557713 SLC41A2Q96JW4 573 aa15.64■□□□□ 0.09
SCFD1-224ENST00000557713 DNAJC7Q99615 494 aa15.64■□□□□ 0.09
SCFD1-224ENST00000557713 IL26Q9NPH9 171 aa15.64■□□□□ 0.09
SCFD1-224ENST00000557713 UBP1Q9NZI7 540 aa15.64■□□□□ 0.09
SCFD1-224ENST00000557713 LNPEPQ9UIQ6 1025 aa15.64■□□□□ 0.09
SCFD1-224ENST00000557713 POLHQ9Y253 713 aa15.64■□□□□ 0.09
SCFD1-224ENST00000557713 IGHV5-51A0A0C4DH38 117 aa15.63■□□□□ 0.09
SCFD1-224ENST00000557713 SSU72P8A0A1W2PR75 194 aa15.63■□□□□ 0.09
SCFD1-224ENST00000557713 GOLGA6L19H0YKK7 550 aa15.63■□□□□ 0.09
SCFD1-224ENST00000557713 MKRN2OSH3BPM6 223 aa15.63■□□□□ 0.09
SCFD1-224ENST00000557713 CREG1O75629 220 aa15.63■□□□□ 0.09
SCFD1-224ENST00000557713 POP7O75817 140 aaKnown RBP15.63■□□□□ 0.09
SCFD1-224ENST00000557713 TIAF1O95411 115 aa15.63■□□□□ 0.09
SCFD1-224ENST00000557713 MT-ND3P03897 115 aa15.63■□□□□ 0.09
SCFD1-224ENST00000557713 NR1D1P20393 614 aa15.63■□□□□ 0.09
SCFD1-224ENST00000557713 FECHP22830 423 aa15.63■□□□□ 0.09
SCFD1-224ENST00000557713 CD68P34810 354 aaPredicted RBP15.63■□□□□ 0.09
SCFD1-224ENST00000557713 CA5AP35218 305 aa15.63■□□□□ 0.09
SCFD1-224ENST00000557713 CD97P48960 835 aa15.63■□□□□ 0.09
SCFD1-224ENST00000557713 PPP1CAP62136 330 aa15.63■□□□□ 0.09
SCFD1-224ENST00000557713 DYNLT1P63172 113 aa15.63■□□□□ 0.09
SCFD1-224ENST00000557713 DMPKQ09013 629 aa15.63■□□□□ 0.09
SCFD1-224ENST00000557713 DNASE1L3Q13609 305 aa15.63■□□□□ 0.09
SCFD1-224ENST00000557713 GTF2H3Q13889 308 aa15.63■□□□□ 0.09
SCFD1-224ENST00000557713 PRKD1Q15139 912 aaPredicted RBP15.63■□□□□ 0.09
SCFD1-224ENST00000557713 KDELC1Q6UW63 502 aa15.63■□□□□ 0.09
SCFD1-224ENST00000557713 TRAPPC5Q8IUR0 188 aa15.63■□□□□ 0.09
SCFD1-224ENST00000557713 RASGEF1AQ8N9B8 481 aa15.63■□□□□ 0.09
SCFD1-224ENST00000557713 OR8K1Q8NGG5 319 aa15.63■□□□□ 0.09
SCFD1-224ENST00000557713 GDAP1Q8TB36 358 aa15.63■□□□□ 0.09
SCFD1-224ENST00000557713 UBXN4Q92575 508 aa15.63■□□□□ 0.09
SCFD1-224ENST00000557713 FCRL4Q96PJ5 515 aa15.63■□□□□ 0.09
SCFD1-224ENST00000557713 TWSG1Q9GZX9 223 aa15.63■□□□□ 0.09
SCFD1-224ENST00000557713 TRABDQ9H4I3 376 aa15.63■□□□□ 0.09
SCFD1-224ENST00000557713 LHX9Q9NQ69 397 aa15.63■□□□□ 0.09
SCFD1-224ENST00000557713 IL17CQ9P0M4 197 aa15.63■□□□□ 0.09
SCFD1-224ENST00000557713 SAE1Q9UBE0 346 aaPredicted RBP15.63■□□□□ 0.09
SCFD1-224ENST00000557713 PLAAQ9Y263 795 aa15.63■□□□□ 0.09
SCFD1-224ENST00000557713 SPENQ96T58 3664 aaKnown RBP15.63■□□□□ 0.09
SCFD1-224ENST00000557713 PIPSLA2A3N6 862 aa15.62■□□□□ 0.09
SCFD1-224ENST00000557713 CDC14CA4D256 554 aa15.62■□□□□ 0.09
SCFD1-224ENST00000557713 UGT1A9O60656 530 aa15.62■□□□□ 0.09
SCFD1-224ENST00000557713 EPOP01588 193 aa15.62■□□□□ 0.09
SCFD1-224ENST00000557713 KRT1P04264 644 aa15.62■□□□□ 0.09
SCFD1-224ENST00000557713 FOLR1P15328 257 aa15.62■□□□□ 0.09
SCFD1-224ENST00000557713 UGT1A6P19224 532 aa15.62■□□□□ 0.09
SCFD1-224ENST00000557713 UGT1A1P22309 533 aa15.62■□□□□ 0.09
SCFD1-224ENST00000557713 UGT1A4P22310 534 aa15.62■□□□□ 0.09
SCFD1-224ENST00000557713 HALP42357 657 aa15.62■□□□□ 0.09
SCFD1-224ENST00000557713 NR2C2P49116 596 aa15.62■□□□□ 0.09
SCFD1-224ENST00000557713 WASHC5Q12768 1159 aa15.62■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms