RNA–Protein interactions for RNA: ENST00000556809.1

PABPN1-206, Transcript of poly(A) binding protein nuclear 1, humanhuman

TSL 2

Gene PABPN1, Length 969 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-206ENST00000556809 KIFC1Q9BW19 673 aa22.19■■□□□ 1.14
PABPN1-206ENST00000556809 OR2AG1Q9H205 316 aa22.19■■□□□ 1.14
PABPN1-206ENST00000556809 MRM3Q9HC36 420 aaKnown RBP22.19■■□□□ 1.14
PABPN1-206ENST00000556809 ZNHIT2Q9UHR6 403 aa22.19■■□□□ 1.14
PABPN1-206ENST00000556809 CRLS1Q9UJA2 301 aa22.19■■□□□ 1.14
PABPN1-206ENST00000556809 AGAP14A8MT82 685 aa22.18■■□□□ 1.14
PABPN1-206ENST00000556809 GPR89AB7ZAQ6 455 aa22.18■■□□□ 1.14
PABPN1-206ENST00000556809 SMAPO00193 183 aa22.18■■□□□ 1.14
PABPN1-206ENST00000556809 CHUKO15111 745 aa22.18■■□□□ 1.14
PABPN1-206ENST00000556809 VEGFDO43915 354 aa22.18■■□□□ 1.14
PABPN1-206ENST00000556809 CSO75390 466 aaKnown RBP22.18■■□□□ 1.14
PABPN1-206ENST00000556809 GPR89BP0CG08 455 aa22.18■■□□□ 1.14
PABPN1-206ENST00000556809 ACTR1BP42025 376 aa22.18■■□□□ 1.14
PABPN1-206ENST00000556809 PDX1P52945 283 aa22.18■■□□□ 1.14
PABPN1-206ENST00000556809 ACTR1AP61163 376 aa22.18■■□□□ 1.14
PABPN1-206ENST00000556809 CYP4F3Q08477 520 aa22.18■■□□□ 1.14
PABPN1-206ENST00000556809 ISXQ2M1V0 245 aa22.18■■□□□ 1.14
PABPN1-206ENST00000556809 KHDC1Q4VXA5 237 aaKnown RBP22.18■■□□□ 1.14
PABPN1-206ENST00000556809 LDLRAP1Q5SW96 308 aa22.18■■□□□ 1.14
PABPN1-206ENST00000556809 GPRC6AQ5T6X5 926 aa22.18■■□□□ 1.14
PABPN1-206ENST00000556809 HIBCHQ6NVY1 386 aaPredicted RBP22.18■■□□□ 1.14
PABPN1-206ENST00000556809 MPP5Q8N3R9 675 aa22.18■■□□□ 1.14
PABPN1-206ENST00000556809 ARL14Q8N4G2 192 aa22.18■■□□□ 1.14
PABPN1-206ENST00000556809 PATE1Q8WXA2 126 aa22.18■■□□□ 1.14
PABPN1-206ENST00000556809 HDAC10Q969S8 669 aa22.18■■□□□ 1.14
PABPN1-206ENST00000556809 ULK4Q96C45 1275 aa22.18■■□□□ 1.14
PABPN1-206ENST00000556809 FAM96AQ9H5X1 160 aa22.18■■□□□ 1.14
PABPN1-206ENST00000556809 LRIT1Q9P2V4 623 aa22.18■■□□□ 1.14
PABPN1-206ENST00000556809 SOX13Q9UN79 622 aa22.18■■□□□ 1.14
PABPN1-206ENST00000556809 SNX24Q9Y343 169 aa22.18■■□□□ 1.14
PABPN1-206ENST00000556809 DMXL2Q8TDJ6 3036 aa22.18■■□□□ 1.14
PABPN1-206ENST00000556809 CCDC162PA2VCL2 907 aa22.17■■□□□ 1.14
PABPN1-206ENST00000556809 SDR42E2A6NKP2 422 aa22.17■■□□□ 1.14
PABPN1-206ENST00000556809 NDC80O14777 642 aa22.17■■□□□ 1.14
PABPN1-206ENST00000556809 GRID2O43424 1007 aa22.17■■□□□ 1.14
PABPN1-206ENST00000556809 RPL21P46778 160 aaKnown RBP22.17■■□□□ 1.14
PABPN1-206ENST00000556809 ITGA8P53708 1063 aa22.17■■□□□ 1.14
PABPN1-206ENST00000556809 MAZP56270 477 aaKnown RBP22.17■■□□□ 1.14
PABPN1-206ENST00000556809 CCL7P80098 99 aa22.17■■□□□ 1.14
PABPN1-206ENST00000556809 CACNG1Q06432 222 aa22.17■■□□□ 1.14
PABPN1-206ENST00000556809 NR1D2Q14995 579 aa22.17■■□□□ 1.14
PABPN1-206ENST00000556809 GPR33Q49SQ1 333 aa22.17■■□□□ 1.14
PABPN1-206ENST00000556809 ZRANB3Q5FWF4 1079 aa22.17■■□□□ 1.14
PABPN1-206ENST00000556809 CASC4Q6P4E1 433 aa22.17■■□□□ 1.14
PABPN1-206ENST00000556809 RBM44Q6ZP01 1051 aaKnown RBP22.17■■□□□ 1.14
PABPN1-206ENST00000556809 MICALCLQ6ZW33 695 aa22.17■■□□□ 1.14
PABPN1-206ENST00000556809 CHST15Q7LFX5 561 aaPredicted RBP22.17■■□□□ 1.14
PABPN1-206ENST00000556809 ZNF438Q7Z4V0 828 aa22.17■■□□□ 1.14
PABPN1-206ENST00000556809 NXPE2Q96DL1 559 aa22.17■■□□□ 1.14
PABPN1-206ENST00000556809 ZCCHC2Q9C0B9 1178 aaKnown RBP22.17■■□□□ 1.14
PABPN1-206ENST00000556809 TREX1Q9NSU2 369 aa22.17■■□□□ 1.14
PABPN1-206ENST00000556809 SAMD15Q9P1V8 674 aa22.17■■□□□ 1.14
PABPN1-206ENST00000556809 ENTPD2Q9Y5L3 495 aa22.17■■□□□ 1.14
PABPN1-206ENST00000556809 BPTFQ12830 3046 aa22.17■■□□□ 1.14
PABPN1-206ENST00000556809 UNC13CQ8NB66 2214 aa22.16■■□□□ 1.14
PABPN1-206ENST00000556809 CTAGE15A4D2H0 777 aa22.16■■□□□ 1.14
PABPN1-206ENST00000556809 SRRM3A6NNA2 597 aaPredicted RBP22.16■■□□□ 1.14
PABPN1-206ENST00000556809 EML2O95834 649 aa22.16■■□□□ 1.14
PABPN1-206ENST00000556809 CTAGE8P0CG41 777 aa22.16■■□□□ 1.14
PABPN1-206ENST00000556809 NMBRP28336 390 aa22.16■■□□□ 1.14
PABPN1-206ENST00000556809 PRAMEP78395 509 aa22.16■■□□□ 1.14
PABPN1-206ENST00000556809 B4GALNT1Q00973 533 aa22.16■■□□□ 1.14
PABPN1-206ENST00000556809 TMEM115Q12893 351 aaPredicted RBP22.16■■□□□ 1.14
PABPN1-206ENST00000556809 C8orf74Q6P047 294 aa22.16■■□□□ 1.14
PABPN1-206ENST00000556809 AFTPHQ6ULP2 937 aa22.16■■□□□ 1.14
PABPN1-206ENST00000556809 SPRED1Q7Z699 444 aa22.16■■□□□ 1.14
PABPN1-206ENST00000556809 CTAGE6Q86UF2 777 aa22.16■■□□□ 1.14
PABPN1-206ENST00000556809 CTAGE4Q8IX94 777 aa22.16■■□□□ 1.14
PABPN1-206ENST00000556809 NXPE1Q8N323 547 aa22.16■■□□□ 1.14
PABPN1-206ENST00000556809 BBOF1Q8ND07 529 aa22.16■■□□□ 1.14
PABPN1-206ENST00000556809 GRAMD1AQ96CP6 724 aa22.16■■□□□ 1.14
PABPN1-206ENST00000556809 RAB17Q9H0T7 212 aa22.16■■□□□ 1.14
PABPN1-206ENST00000556809 LRRN3Q9H3W5 708 aa22.16■■□□□ 1.14
PABPN1-206ENST00000556809 ANAPC5Q9UJX4 755 aa22.16■■□□□ 1.14
PABPN1-206ENST00000556809 UTP11Q9Y3A2 253 aaKnown RBP22.16■■□□□ 1.14
PABPN1-206ENST00000556809 TRBV5-4A0A0C4DH59 114 aa22.15■■□□□ 1.14
PABPN1-206ENST00000556809 MAGEB16A2A368 324 aa22.15■■□□□ 1.14
PABPN1-206ENST00000556809 A6NCN8 305 aa22.15■■□□□ 1.14
PABPN1-206ENST00000556809 OR51F1A6NGY5 319 aa22.15■■□□□ 1.14
PABPN1-206ENST00000556809 PRR19A6NJB7 356 aa22.15■■□□□ 1.14
PABPN1-206ENST00000556809 TP73O15350 636 aa22.15■■□□□ 1.14
PABPN1-206ENST00000556809 CDK14O94921 469 aa22.15■■□□□ 1.14
PABPN1-206ENST00000556809 GOT2P00505 430 aaKnown RBP22.15■■□□□ 1.14
PABPN1-206ENST00000556809 RPLP0P05388 317 aaKnown RBP22.15■■□□□ 1.14
PABPN1-206ENST00000556809 PRSS56P0CW18 603 aa22.15■■□□□ 1.14
PABPN1-206ENST00000556809 AKT1P31749 480 aa22.15■■□□□ 1.14
PABPN1-206ENST00000556809 CDKN1CP49918 316 aaPredicted RBP22.15■■□□□ 1.14
PABPN1-206ENST00000556809 CLCNKAP51800 687 aa22.15■■□□□ 1.14
PABPN1-206ENST00000556809 GTF2H3Q13889 308 aa22.15■■□□□ 1.14
PABPN1-206ENST00000556809 SPIDRQ14159 915 aa22.15■■□□□ 1.14
PABPN1-206ENST00000556809 DUPD1Q68J44 220 aa22.15■■□□□ 1.14
PABPN1-206ENST00000556809 CCNJLQ8IV13 435 aa22.15■■□□□ 1.14
PABPN1-206ENST00000556809 ZNF547Q8IVP9 402 aa22.15■■□□□ 1.14
PABPN1-206ENST00000556809 AGGF1Q8N302 714 aaeCLIP22.15■■□□□ 1.14
PABPN1-206ENST00000556809 MMGT1Q8N4V1 131 aa22.15■■□□□ 1.14
PABPN1-206ENST00000556809 OR6P1Q8NGX9 317 aa22.15■■□□□ 1.14
PABPN1-206ENST00000556809 MFSD3Q96ES6 412 aa22.15■■□□□ 1.14
PABPN1-206ENST00000556809 SIGLEC10Q96LC7 697 aa22.15■■□□□ 1.14
PABPN1-206ENST00000556809 TTC25Q96NG3 672 aa22.15■■□□□ 1.14
PABPN1-206ENST00000556809 DPH5Q9H2P9 285 aa22.15■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms