RNA–Protein interactions for RNA: ENST00000556533.5

PSEN1-217, Transcript of presenilin 1, humanhuman

TSL 5

Gene PSEN1, Length 550 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-217ENST00000556533 ZNF514Q96K75 400 aaPredicted RBP16.81■□□□□ 0.28
PSEN1-217ENST00000556533 RUNDC3BQ96NL0 473 aa16.81■□□□□ 0.28
PSEN1-217ENST00000556533 GFM1Q96RP9 751 aaKnown RBP16.81■□□□□ 0.28
PSEN1-217ENST00000556533 KRT12Q99456 494 aa16.81■□□□□ 0.28
PSEN1-217ENST00000556533 RIMKLBQ9ULI2 386 aa16.81■□□□□ 0.28
PSEN1-217ENST00000556533 ARID1BQ8NFD5 2236 aaPredicted RBP16.8■□□□□ 0.28
PSEN1-217ENST00000556533 TRBV5-4A0A0C4DH59 114 aa16.8■□□□□ 0.28
PSEN1-217ENST00000556533 FAM221BA6H8Z2 402 aa16.8■□□□□ 0.28
PSEN1-217ENST00000556533 CCDC188H7C350 402 aa16.8■□□□□ 0.28
PSEN1-217ENST00000556533 PPM1DO15297 605 aa16.8■□□□□ 0.28
PSEN1-217ENST00000556533 CSO75390 466 aaKnown RBP16.8■□□□□ 0.28
PSEN1-217ENST00000556533 F3P13726 295 aa16.8■□□□□ 0.28
PSEN1-217ENST00000556533 SLC2A4P14672 509 aa16.8■□□□□ 0.28
PSEN1-217ENST00000556533 PSMA3P25788 255 aa16.8■□□□□ 0.28
PSEN1-217ENST00000556533 FOXN2P32314 431 aa16.8■□□□□ 0.28
PSEN1-217ENST00000556533 CLCNKAP51800 687 aa16.8■□□□□ 0.28
PSEN1-217ENST00000556533 SPIDRQ14159 915 aa16.8■□□□□ 0.28
PSEN1-217ENST00000556533 NFE2L1Q14494 772 aa16.8■□□□□ 0.28
PSEN1-217ENST00000556533 FASTKD1Q53R41 847 aaKnown RBP16.8■□□□□ 0.28
PSEN1-217ENST00000556533 CDCP2Q5VXM1 449 aa16.8■□□□□ 0.28
PSEN1-217ENST00000556533 FAM83HQ6ZRV2 1179 aaPredicted RBP16.8■□□□□ 0.28
PSEN1-217ENST00000556533 ZNF761Q86XN6 746 aaPredicted RBP16.8■□□□□ 0.28
PSEN1-217ENST00000556533 MPP5Q8N3R9 675 aa16.8■□□□□ 0.28
PSEN1-217ENST00000556533 SFRP1Q8N474 314 aa16.8■□□□□ 0.28
PSEN1-217ENST00000556533 CLDN19Q8N6F1 224 aa16.8■□□□□ 0.28
PSEN1-217ENST00000556533 OTUD6BQ8N6M0 293 aa16.8■□□□□ 0.28
PSEN1-217ENST00000556533 MCUQ8NE86 351 aa16.8■□□□□ 0.28
PSEN1-217ENST00000556533 ZNF592Q92610 1267 aa16.8■□□□□ 0.28
PSEN1-217ENST00000556533 DEPDC7Q96QD5 511 aa16.8■□□□□ 0.28
PSEN1-217ENST00000556533 TTC1Q99614 292 aa16.8■□□□□ 0.28
PSEN1-217ENST00000556533 SLC38A3Q99624 504 aa16.8■□□□□ 0.28
PSEN1-217ENST00000556533 LRRN3Q9H3W5 708 aa16.8■□□□□ 0.28
PSEN1-217ENST00000556533 XAB2Q9HCS7 855 aaKnown RBP16.8■□□□□ 0.28
PSEN1-217ENST00000556533 SCHIP1Q9P0W5 487 aaPredicted RBP16.8■□□□□ 0.28
PSEN1-217ENST00000556533 SAMD15Q9P1V8 674 aa16.8■□□□□ 0.28
PSEN1-217ENST00000556533 ANAPC5Q9UJX4 755 aa16.8■□□□□ 0.28
PSEN1-217ENST00000556533 ATXN7L1Q9ULK2 861 aaPredicted RBP16.8■□□□□ 0.28
PSEN1-217ENST00000556533 PSMD13Q9UNM6 376 aa16.8■□□□□ 0.28
PSEN1-217ENST00000556533 DNMT3AQ9Y6K1 912 aaPredicted RBP16.8■□□□□ 0.28
PSEN1-217ENST00000556533 A6NCN8 305 aa16.79■□□□□ 0.28
PSEN1-217ENST00000556533 MGAT4DA6NG13 374 aa16.79■□□□□ 0.28
PSEN1-217ENST00000556533 SDR42E2A6NKP2 422 aa16.79■□□□□ 0.28
PSEN1-217ENST00000556533 TTI1O43156 1089 aa16.79■□□□□ 0.28
PSEN1-217ENST00000556533 B4GAT1O43505 415 aa16.79■□□□□ 0.28
PSEN1-217ENST00000556533 KCNJ13O60928 360 aa16.79■□□□□ 0.28
PSEN1-217ENST00000556533 POLBP06746 335 aa16.79■□□□□ 0.28
PSEN1-217ENST00000556533 PNLIPP16233 465 aa16.79■□□□□ 0.28
PSEN1-217ENST00000556533 MRPS25P82663 173 aaKnown RBP16.79■□□□□ 0.28
PSEN1-217ENST00000556533 HHEXQ03014 270 aa16.79■□□□□ 0.28
PSEN1-217ENST00000556533 ACVR1Q04771 509 aa16.79■□□□□ 0.28
PSEN1-217ENST00000556533 BCL7AQ4VC05 210 aa16.79■□□□□ 0.28
PSEN1-217ENST00000556533 IZUMO3Q5VZ72 239 aa16.79■□□□□ 0.28
PSEN1-217ENST00000556533 RBM44Q6ZP01 1051 aaKnown RBP16.79■□□□□ 0.28
PSEN1-217ENST00000556533 SYDE1Q6ZW31 735 aaPredicted RBP16.79■□□□□ 0.28
PSEN1-217ENST00000556533 USP53Q70EK8 1073 aa16.79■□□□□ 0.28
PSEN1-217ENST00000556533 SPRED1Q7Z699 444 aa16.79■□□□□ 0.28
PSEN1-217ENST00000556533 SLC9B2Q86UD5 537 aa16.79■□□□□ 0.28
PSEN1-217ENST00000556533 JAMLQ86YT9 394 aa16.79■□□□□ 0.28
PSEN1-217ENST00000556533 TRIM48Q8IWZ4 208 aa16.79■□□□□ 0.28
PSEN1-217ENST00000556533 CFAP206Q8IYR0 622 aa16.79■□□□□ 0.28
PSEN1-217ENST00000556533 DCBLD1Q8N8Z6 715 aa16.79■□□□□ 0.28
PSEN1-217ENST00000556533 NAT8LQ8N9F0 302 aa16.79■□□□□ 0.28
PSEN1-217ENST00000556533 SLCO2A1Q92959 643 aa16.79■□□□□ 0.28
PSEN1-217ENST00000556533 SERPINB12Q96P63 405 aa16.79■□□□□ 0.28
PSEN1-217ENST00000556533 TRIM51Q9BSJ1 452 aa16.79■□□□□ 0.28
PSEN1-217ENST00000556533 KIFC1Q9BW19 673 aa16.79■□□□□ 0.28
PSEN1-217ENST00000556533 TRIM31Q9BZY9 425 aa16.79■□□□□ 0.28
PSEN1-217ENST00000556533 CATSPERZQ9NTU4 200 aa16.79■□□□□ 0.28
PSEN1-217ENST00000556533 KCNK4Q9NYG8 393 aa16.79■□□□□ 0.28
PSEN1-217ENST00000556533 CPNE7Q9UBL6 633 aa16.79■□□□□ 0.28
PSEN1-217ENST00000556533 MAD1L1Q9Y6D9 718 aa16.79■□□□□ 0.28
PSEN1-217ENST00000556533 BPTFQ12830 3046 aa16.78■□□□□ 0.28
PSEN1-217ENST00000556533 KIR2DS5A0A0G2JLQ3 304 aa16.78■□□□□ 0.28
PSEN1-217ENST00000556533 A0A0G2JNG1 304 aa16.78■□□□□ 0.28
PSEN1-217ENST00000556533 A0A1W2PQM1 296 aa16.78■□□□□ 0.28
PSEN1-217ENST00000556533 TRABD2BA6NFA1 517 aa16.78■□□□□ 0.28
PSEN1-217ENST00000556533 OR5K4A6NMS3 321 aa16.78■□□□□ 0.28
PSEN1-217ENST00000556533 C1QTNF9BB2RNN3 333 aa16.78■□□□□ 0.28
PSEN1-217ENST00000556533 KIR2DS3K7RE56 304 aa16.78■□□□□ 0.28
PSEN1-217ENST00000556533 DNALI1O14645 258 aaPredicted RBP16.78■□□□□ 0.28
PSEN1-217ENST00000556533 CD3EAPO15446 510 aaKnown RBP16.78■□□□□ 0.28
PSEN1-217ENST00000556533 ZW10O43264 779 aa16.78■□□□□ 0.28
PSEN1-217ENST00000556533 SGTAO43765 313 aa16.78■□□□□ 0.28
PSEN1-217ENST00000556533 VAPBO95292 243 aa16.78■□□□□ 0.28
PSEN1-217ENST00000556533 C1QTNF9P0C862 333 aa16.78■□□□□ 0.28
PSEN1-217ENST00000556533 MLNP12872 115 aa16.78■□□□□ 0.28
PSEN1-217ENST00000556533 HALP42357 657 aa16.78■□□□□ 0.28
PSEN1-217ENST00000556533 MAPK9P45984 424 aa16.78■□□□□ 0.28
PSEN1-217ENST00000556533 KIR2DS5Q14953 304 aa16.78■□□□□ 0.28
PSEN1-217ENST00000556533 RNASEH2BQ5TBB1 312 aaKnown RBP16.78■□□□□ 0.28
PSEN1-217ENST00000556533 LYPLAL1Q5VWZ2 237 aa16.78■□□□□ 0.28
PSEN1-217ENST00000556533 NKAIN2Q5VXU1 208 aa16.78■□□□□ 0.28
PSEN1-217ENST00000556533 PCGF5Q86SE9 256 aa16.78■□□□□ 0.28
PSEN1-217ENST00000556533 LDB1Q86U70 411 aaPredicted RBP16.78■□□□□ 0.28
PSEN1-217ENST00000556533 OR2L2Q8NH16 312 aa16.78■□□□□ 0.28
PSEN1-217ENST00000556533 WDR48Q8TAF3 677 aa16.78■□□□□ 0.28
PSEN1-217ENST00000556533 CXorf40BQ96DE9 158 aa16.78■□□□□ 0.28
PSEN1-217ENST00000556533 MFSD3Q96ES6 412 aa16.78■□□□□ 0.28
PSEN1-217ENST00000556533 CNTNAP3BQ96NU0 1288 aa16.78■□□□□ 0.28
PSEN1-217ENST00000556533 CCM2Q9BSQ5 444 aa16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms