RNA–Protein interactions for RNA: ENST00000556432.1

ACTN1-219, Transcript of actinin alpha 1, humanhuman

TSL 1 (best)

Gene ACTN1, Length 558 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-219ENST00000556432 PCDH9Q9HC56 1237 aa13.66□□□□□ -0.22
ACTN1-219ENST00000556432 TRIM39Q9HCM9 518 aa13.66□□□□□ -0.22
ACTN1-219ENST00000556432 STAU2Q9NUL3 570 aaKnown RBP eCLIP13.66□□□□□ -0.22
ACTN1-219ENST00000556432 HAUS2Q9NVX0 235 aa13.66□□□□□ -0.22
ACTN1-219ENST00000556432 TAS2R14Q9NYV8 317 aa13.66□□□□□ -0.22
ACTN1-219ENST00000556432 COPG1Q9Y678 874 aaKnown RBP13.66□□□□□ -0.22
ACTN1-219ENST00000556432 SETD2Q9BYW2 2564 aaPredicted RBP13.65□□□□□ -0.22
ACTN1-219ENST00000556432 GPR89AB7ZAQ6 455 aa13.65□□□□□ -0.22
ACTN1-219ENST00000556432 ALPPP05187 535 aa13.65□□□□□ -0.22
ACTN1-219ENST00000556432 GPR89BP0CG08 455 aa13.65□□□□□ -0.22
ACTN1-219ENST00000556432 VCLP18206 1134 aa13.65□□□□□ -0.22
ACTN1-219ENST00000556432 IDSP22304 550 aa13.65□□□□□ -0.22
ACTN1-219ENST00000556432 IL4RP24394 825 aa13.65□□□□□ -0.22
ACTN1-219ENST00000556432 HALP42357 657 aa13.65□□□□□ -0.22
ACTN1-219ENST00000556432 PER3P56645 1201 aa13.65□□□□□ -0.22
ACTN1-219ENST00000556432 GSDMDP57764 484 aa13.65□□□□□ -0.22
ACTN1-219ENST00000556432 TUBB4BP68371 445 aa13.65□□□□□ -0.22
ACTN1-219ENST00000556432 HSD11B2P80365 405 aa13.65□□□□□ -0.22
ACTN1-219ENST00000556432 ATP1A4Q13733 1029 aa13.65□□□□□ -0.22
ACTN1-219ENST00000556432 TUBB2AQ13885 445 aa13.65□□□□□ -0.22
ACTN1-219ENST00000556432 GPR19Q15760 415 aa13.65□□□□□ -0.22
ACTN1-219ENST00000556432 IZUMO3Q5VZ72 239 aa13.65□□□□□ -0.22
ACTN1-219ENST00000556432 ADGRG6Q86SQ4 1221 aa13.65□□□□□ -0.22
ACTN1-219ENST00000556432 ZC3H18Q86VM9 953 aaKnown RBP13.65□□□□□ -0.22
ACTN1-219ENST00000556432 RAVER1Q8IY67 606 aaKnown RBP13.65□□□□□ -0.22
ACTN1-219ENST00000556432 ADAMTS17Q8TE56 1095 aa13.65□□□□□ -0.22
ACTN1-219ENST00000556432 CSPG4P5Q96PW8 444 aa13.65□□□□□ -0.22
ACTN1-219ENST00000556432 RANBP9Q96S59 729 aa13.65□□□□□ -0.22
ACTN1-219ENST00000556432 SMAD5Q99717 465 aaKnown RBP13.65□□□□□ -0.22
ACTN1-219ENST00000556432 TIMM29Q9BSF4 260 aa13.65□□□□□ -0.22
ACTN1-219ENST00000556432 TUBB2BQ9BVA1 445 aa13.65□□□□□ -0.22
ACTN1-219ENST00000556432 RAB33BQ9H082 229 aa13.65□□□□□ -0.22
ACTN1-219ENST00000556432 SOHLH2Q9NX45 425 aa13.65□□□□□ -0.22
ACTN1-219ENST00000556432 TCFL5Q9UL49 500 aa13.65□□□□□ -0.22
ACTN1-219ENST00000556432 ENTPD4Q9Y227 616 aa13.65□□□□□ -0.22
ACTN1-219ENST00000556432 ADGRG1Q9Y653 693 aa13.65□□□□□ -0.22
ACTN1-219ENST00000556432 APCP25054 2843 aa13.65□□□□□ -0.22
ACTN1-219ENST00000556432 ITPR3Q14573 2671 aa13.65□□□□□ -0.22
ACTN1-219ENST00000556432 RGSL1A5PLK6 1076 aa13.64□□□□□ -0.23
ACTN1-219ENST00000556432 TLCD2A6NGC4 264 aa13.64□□□□□ -0.23
ACTN1-219ENST00000556432 MTX2O75431 263 aa13.64□□□□□ -0.23
ACTN1-219ENST00000556432 JCHAINP01591 159 aa13.64□□□□□ -0.23
ACTN1-219ENST00000556432 BRAFP15056 766 aa13.64□□□□□ -0.23
ACTN1-219ENST00000556432 HNRNPH3P31942 346 aaKnown RBP13.64□□□□□ -0.23
ACTN1-219ENST00000556432 GLRBP48167 497 aa13.64□□□□□ -0.23
ACTN1-219ENST00000556432 RPL26P61254 145 aaKnown RBP13.64□□□□□ -0.23
ACTN1-219ENST00000556432 KRT31Q15323 416 aa13.64□□□□□ -0.23
ACTN1-219ENST00000556432 DPYSL2Q16555 572 aa13.64□□□□□ -0.23
ACTN1-219ENST00000556432 TMTC4Q5T4D3 741 aa13.64□□□□□ -0.23
ACTN1-219ENST00000556432 HGSNATQ68CP4 663 aa13.64□□□□□ -0.23
ACTN1-219ENST00000556432 ABRAXAS1Q6UWZ7 409 aa13.64□□□□□ -0.23
ACTN1-219ENST00000556432 POLNQ7Z5Q5 900 aa13.64□□□□□ -0.23
ACTN1-219ENST00000556432 KMT5CQ86Y97 462 aa13.64□□□□□ -0.23
ACTN1-219ENST00000556432 TRAPPC5Q8IUR0 188 aa13.64□□□□□ -0.23
ACTN1-219ENST00000556432 MCEMP1Q8IX19 187 aa13.64□□□□□ -0.23
ACTN1-219ENST00000556432 TEX26Q8N6G2 289 aa13.64□□□□□ -0.23
ACTN1-219ENST00000556432 GLIS1Q8NBF1 620 aa13.64□□□□□ -0.23
ACTN1-219ENST00000556432 CLIP3Q96DZ5 547 aa13.64□□□□□ -0.23
ACTN1-219ENST00000556432 NLNQ9BYT8 704 aa13.64□□□□□ -0.23
ACTN1-219ENST00000556432 RUBCNLQ9H714 662 aa13.64□□□□□ -0.23
ACTN1-219ENST00000556432 KCND1Q9NSA2 647 aa13.64□□□□□ -0.23
ACTN1-219ENST00000556432 DTLQ9NZJ0 730 aa13.64□□□□□ -0.23
ACTN1-219ENST00000556432 RPL26L1Q9UNX3 145 aaKnown RBP13.64□□□□□ -0.23
ACTN1-219ENST00000556432 CROCCQ5TZA2 2017 aa13.63□□□□□ -0.23
ACTN1-219ENST00000556432 TMEM191CA6NGB0 347 aa13.63□□□□□ -0.23
ACTN1-219ENST00000556432 CHUKO15111 745 aa13.63□□□□□ -0.23
ACTN1-219ENST00000556432 LRRTM2O43300 516 aa13.63□□□□□ -0.23
ACTN1-219ENST00000556432 CDK14O94921 469 aa13.63□□□□□ -0.23
ACTN1-219ENST00000556432 PRLP01236 227 aa13.63□□□□□ -0.23
ACTN1-219ENST00000556432 RAB40ALP0C0E4 278 aa13.63□□□□□ -0.23
ACTN1-219ENST00000556432 CCDC172P0C7W6 258 aa13.63□□□□□ -0.23
ACTN1-219ENST00000556432 ATP1A3P13637 1013 aa13.63□□□□□ -0.23
ACTN1-219ENST00000556432 FECHP22830 423 aa13.63□□□□□ -0.23
ACTN1-219ENST00000556432 CES1P23141 567 aa13.63□□□□□ -0.23
ACTN1-219ENST00000556432 OTX2P32243 289 aa13.63□□□□□ -0.23
ACTN1-219ENST00000556432 ZNF165P49910 485 aa13.63□□□□□ -0.23
ACTN1-219ENST00000556432 PRAMEF17Q5VTA0 474 aa13.63□□□□□ -0.23
ACTN1-219ENST00000556432 AGAP9Q5VTM2 703 aa13.63□□□□□ -0.23
ACTN1-219ENST00000556432 PLEKHA7Q6IQ23 1121 aa13.63□□□□□ -0.23
ACTN1-219ENST00000556432 LCN10Q6JVE6 187 aa13.63□□□□□ -0.23
ACTN1-219ENST00000556432 ARMC6Q6NXE6 501 aa13.63□□□□□ -0.23
ACTN1-219ENST00000556432 PPP1R2P3Q6NXS1 205 aa13.63□□□□□ -0.23
ACTN1-219ENST00000556432 RAB43Q86YS6 212 aa13.63□□□□□ -0.23
ACTN1-219ENST00000556432 SLC38A9Q8NBW4 561 aa13.63□□□□□ -0.23
ACTN1-219ENST00000556432 OR8K5Q8NH50 307 aa13.63□□□□□ -0.23
ACTN1-219ENST00000556432 UBE2Q2Q8WVN8 375 aa13.63□□□□□ -0.23
ACTN1-219ENST00000556432 CPT1BQ92523 772 aa13.63□□□□□ -0.23
ACTN1-219ENST00000556432 GLYATL1Q969I3 302 aa13.63□□□□□ -0.23
ACTN1-219ENST00000556432 LYSMD1Q96S90 227 aa13.63□□□□□ -0.23
ACTN1-219ENST00000556432 ZSCAN5AQ9BUG6 496 aa13.63□□□□□ -0.23
ACTN1-219ENST00000556432 FANCEQ9HB96 536 aa13.63□□□□□ -0.23
ACTN1-219ENST00000556432 AGPAT4Q9NRZ5 378 aa13.63□□□□□ -0.23
ACTN1-219ENST00000556432 RBM22Q9NW64 420 aaKnown RBP eCLIP13.63□□□□□ -0.23
ACTN1-219ENST00000556432 SEMA5BQ9P283 1151 aa13.63□□□□□ -0.23
ACTN1-219ENST00000556432 C5AR2Q9P296 337 aa13.63□□□□□ -0.23
ACTN1-219ENST00000556432 POLEQ07864 2286 aa13.63□□□□□ -0.23
ACTN1-219ENST00000556432 PRSS44E7EML9 344 aa13.62□□□□□ -0.23
ACTN1-219ENST00000556432 MEN1O00255 615 aa13.62□□□□□ -0.23
ACTN1-219ENST00000556432 DDX3YO15523 660 aaKnown RBP13.62□□□□□ -0.23
ACTN1-219ENST00000556432 IL1R2P27930 398 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms