RNA–Protein interactions for RNA: ENST00000555506.1

KTN1-222, Transcript of kinectin 1, humanhuman

TSL 1 (best)

Gene KTN1, Length 1,464 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KTN1-222ENST00000555506 WDR20Q8TBZ3 569 aa4.3□□□□□ -1.72
KTN1-222ENST00000555506 MAGEC3Q8TD91 643 aa4.3□□□□□ -1.72
KTN1-222ENST00000555506 SECISBP2LQ93073 1101 aaKnown RBP4.3□□□□□ -1.72
KTN1-222ENST00000555506 SPACA9Q96E40 222 aaPredicted RBP4.3□□□□□ -1.72
KTN1-222ENST00000555506 FCRL4Q96PJ5 515 aa4.3□□□□□ -1.72
KTN1-222ENST00000555506 SMC6Q96SB8 1091 aa4.3□□□□□ -1.72
KTN1-222ENST00000555506 SLC25A33Q9BSK2 321 aa4.3□□□□□ -1.72
KTN1-222ENST00000555506 SLC25A23Q9BV35 468 aa4.3□□□□□ -1.72
KTN1-222ENST00000555506 EBF3Q9H4W6 596 aa4.3□□□□□ -1.72
KTN1-222ENST00000555506 ANKZF1Q9H8Y5 726 aa4.3□□□□□ -1.72
KTN1-222ENST00000555506 NOX4Q9NPH5 578 aa4.3□□□□□ -1.72
KTN1-222ENST00000555506 PFDN4Q9NQP4 134 aa4.3□□□□□ -1.72
KTN1-222ENST00000555506 MCM9Q9NXL9 1143 aa4.3□□□□□ -1.72
KTN1-222ENST00000555506 B3GALT5Q9Y2C3 310 aa4.3□□□□□ -1.72
KTN1-222ENST00000555506 A0A0U1RQJ8 604 aa4.29□□□□□ -1.72
KTN1-222ENST00000555506 TMEM189-UBE2V1I3L0A0 370 aa4.29□□□□□ -1.72
KTN1-222ENST00000555506 J3QR06 171 aa4.29□□□□□ -1.72
KTN1-222ENST00000555506 IKBKBO14920 756 aa4.29□□□□□ -1.72
KTN1-222ENST00000555506 DIAPH2O60879 1101 aa4.29□□□□□ -1.72
KTN1-222ENST00000555506 SERPINI2O75830 405 aa4.29□□□□□ -1.72
KTN1-222ENST00000555506 SRCP12931 536 aa4.29□□□□□ -1.72
KTN1-222ENST00000555506 PFKFB1P16118 471 aa4.29□□□□□ -1.72
KTN1-222ENST00000555506 KCNA5P22460 613 aa4.29□□□□□ -1.72
KTN1-222ENST00000555506 DNASE1P24855 282 aa4.29□□□□□ -1.72
KTN1-222ENST00000555506 CTNNA1P35221 906 aaKnown RBP4.29□□□□□ -1.72
KTN1-222ENST00000555506 GP5P40197 560 aa4.29□□□□□ -1.72
KTN1-222ENST00000555506 RBP5P82980 135 aa4.29□□□□□ -1.72
KTN1-222ENST00000555506 DDR1Q08345 913 aa4.29□□□□□ -1.72
KTN1-222ENST00000555506 BFSP1Q12934 665 aa4.29□□□□□ -1.72
KTN1-222ENST00000555506 UBE2V1Q13404 147 aa4.29□□□□□ -1.72
KTN1-222ENST00000555506 TNIP1Q15025 636 aa4.29□□□□□ -1.72
KTN1-222ENST00000555506 HYAL4Q2M3T9 481 aa4.29□□□□□ -1.72
KTN1-222ENST00000555506 KRTCAP3Q53RY4 240 aa4.29□□□□□ -1.72
KTN1-222ENST00000555506 EFHC1Q5JVL4 640 aa4.29□□□□□ -1.72
KTN1-222ENST00000555506 RGMBQ6NW40 437 aa4.29□□□□□ -1.72
KTN1-222ENST00000555506 DCLRE1AQ6PJP8 1040 aa4.29□□□□□ -1.72
KTN1-222ENST00000555506 ZNF534Q76KX8 674 aa4.29□□□□□ -1.72
KTN1-222ENST00000555506 ATG9AQ7Z3C6 839 aa4.29□□□□□ -1.72
KTN1-222ENST00000555506 PM20D2Q8IYS1 436 aa4.29□□□□□ -1.72
KTN1-222ENST00000555506 PRR26Q8N8Z3 221 aa4.29□□□□□ -1.72
KTN1-222ENST00000555506 ACVR1CQ8NER5 493 aa4.29□□□□□ -1.72
KTN1-222ENST00000555506 OR14A16Q8NHC5 309 aa4.29□□□□□ -1.72
KTN1-222ENST00000555506 HMGCLL1Q8TB92 370 aa4.29□□□□□ -1.72
KTN1-222ENST00000555506 THAP6Q8TBB0 222 aa4.29□□□□□ -1.72
KTN1-222ENST00000555506 TBC1D16Q8TBP0 767 aa4.29□□□□□ -1.72
KTN1-222ENST00000555506 UTP15Q8TED0 518 aaKnown RBP4.29□□□□□ -1.72
KTN1-222ENST00000555506 WASF1Q92558 559 aa4.29□□□□□ -1.72
KTN1-222ENST00000555506 ATP6V1E2Q96A05 226 aa4.29□□□□□ -1.72
KTN1-222ENST00000555506 GBP5Q96PP8 586 aa4.29□□□□□ -1.72
KTN1-222ENST00000555506 CMKLR1Q99788 373 aa4.29□□□□□ -1.72
KTN1-222ENST00000555506 SYT17Q9BSW7 474 aa4.29□□□□□ -1.72
KTN1-222ENST00000555506 NUP85Q9BW27 656 aa4.29□□□□□ -1.72
KTN1-222ENST00000555506 DCLK3Q9C098 648 aa4.29□□□□□ -1.72
KTN1-222ENST00000555506 NOL11Q9H8H0 719 aaKnown RBP4.29□□□□□ -1.72
KTN1-222ENST00000555506 CNOT10Q9H9A5 744 aaKnown RBP4.29□□□□□ -1.72
KTN1-222ENST00000555506 PCDH9Q9HC56 1237 aa4.29□□□□□ -1.72
KTN1-222ENST00000555506 HIF1ANQ9NWT6 349 aa4.29□□□□□ -1.72
KTN1-222ENST00000555506 KLHL20Q9Y2M5 609 aa4.29□□□□□ -1.72
KTN1-222ENST00000555506 ASTN2O75129 1339 aaPredicted RBP4.28□□□□□ -1.72
KTN1-222ENST00000555506 ZBTB43O43298 467 aa4.28□□□□□ -1.72
KTN1-222ENST00000555506 RFPL2O75678 378 aa4.28□□□□□ -1.72
KTN1-222ENST00000555506 SLCO2B1O94956 709 aa4.28□□□□□ -1.72
KTN1-222ENST00000555506 HSP90AB1P08238 724 aaKnown RBP4.28□□□□□ -1.72
KTN1-222ENST00000555506 LINGO3P0C6S8 592 aa4.28□□□□□ -1.72
KTN1-222ENST00000555506 FDPSP14324 419 aaKnown RBP4.28□□□□□ -1.72
KTN1-222ENST00000555506 NR4A2P43354 598 aa4.28□□□□□ -1.72
KTN1-222ENST00000555506 CCR10P46092 362 aa4.28□□□□□ -1.72
KTN1-222ENST00000555506 CLDN20P56880 219 aa4.28□□□□□ -1.72
KTN1-222ENST00000555506 SNRPEP62304 92 aaKnown RBP4.28□□□□□ -1.72
KTN1-222ENST00000555506 DSC1Q08554 894 aa4.28□□□□□ -1.72
KTN1-222ENST00000555506 GAGE2BQ13066 116 aa4.28□□□□□ -1.72
KTN1-222ENST00000555506 MELKQ14680 651 aa4.28□□□□□ -1.72
KTN1-222ENST00000555506 GAGE2EQ4V326 116 aa4.28□□□□□ -1.72
KTN1-222ENST00000555506 TDRD12Q587J7 1177 aaKnown RBP4.28□□□□□ -1.72
KTN1-222ENST00000555506 GAGE2AQ6NT46 116 aa4.28□□□□□ -1.72
KTN1-222ENST00000555506 C8orf82Q6P1X6 216 aaPredicted RBP4.28□□□□□ -1.72
KTN1-222ENST00000555506 ERN2Q76MJ5 926 aaKnown RBP4.28□□□□□ -1.72
KTN1-222ENST00000555506 DNAJB7Q7Z6W7 309 aaPredicted RBP4.28□□□□□ -1.72
KTN1-222ENST00000555506 CENPVQ7Z7K6 275 aaPredicted RBP4.28□□□□□ -1.72
KTN1-222ENST00000555506 TMEM173Q86WV6 379 aaPredicted RBP4.28□□□□□ -1.72
KTN1-222ENST00000555506 METTL23Q86XA0 190 aa4.28□□□□□ -1.72
KTN1-222ENST00000555506 OR8H3Q8N146 312 aa4.28□□□□□ -1.72
KTN1-222ENST00000555506 SLC5A8Q8N695 610 aa4.28□□□□□ -1.72
KTN1-222ENST00000555506 OR5R1Q8NH85 324 aa4.28□□□□□ -1.72
KTN1-222ENST00000555506 MS4A10Q96PG2 267 aa4.28□□□□□ -1.72
KTN1-222ENST00000555506 SPAG5Q96R06 1193 aa4.28□□□□□ -1.72
KTN1-222ENST00000555506 SLC22A12Q96S37 553 aa4.28□□□□□ -1.72
KTN1-222ENST00000555506 GRPEL1Q9HAV7 217 aa4.28□□□□□ -1.72
KTN1-222ENST00000555506 C1RLQ9NZP8 487 aa4.28□□□□□ -1.72
KTN1-222ENST00000555506 RCC2Q9P258 522 aaKnown RBP4.28□□□□□ -1.72
KTN1-222ENST00000555506 GAGE2DQ9UEU5 116 aa4.28□□□□□ -1.72
KTN1-222ENST00000555506 SNX9Q9Y5X1 595 aa4.28□□□□□ -1.72
KTN1-222ENST00000555506 FLT1P17948 1338 aa4.28□□□□□ -1.73
KTN1-222ENST00000555506 LINC01553A4QN01 128 aa4.27□□□□□ -1.73
KTN1-222ENST00000555506 SLC16A5O15375 505 aa4.27□□□□□ -1.73
KTN1-222ENST00000555506 SSX4O60224 188 aa4.27□□□□□ -1.73
KTN1-222ENST00000555506 IGKV2-30P06310 120 aa4.27□□□□□ -1.73
KTN1-222ENST00000555506 IGHV4-30-4P0DP06 118 aa4.27□□□□□ -1.73
KTN1-222ENST00000555506 SSTR2P30874 369 aa4.27□□□□□ -1.73
KTN1-222ENST00000555506 KCNJ4P48050 445 aa4.27□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms