RNA–Protein interactions for RNA: ENST00000554491.5

ATXN3-227, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,064 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-227ENST00000554491 DMRT3Q9NQL9 472 aa4.42□□□□□ -1.7
ATXN3-227ENST00000554491 IL17RBQ9NRM6 502 aa4.42□□□□□ -1.7
ATXN3-227ENST00000554491 TMEM74BQ9NUR3 256 aa4.42□□□□□ -1.7
ATXN3-227ENST00000554491 FBXO34Q9NWN3 711 aa4.42□□□□□ -1.7
ATXN3-227ENST00000554491 NMRK1Q9NWW6 199 aa4.42□□□□□ -1.7
ATXN3-227ENST00000554491 OR6C2Q9NZP2 312 aa4.42□□□□□ -1.7
ATXN3-227ENST00000554491 TMOD2Q9NZR1 351 aa4.42□□□□□ -1.7
ATXN3-227ENST00000554491 UVRAGQ9P2Y5 699 aa4.42□□□□□ -1.7
ATXN3-227ENST00000554491 FBXO40Q9UH90 709 aa4.42□□□□□ -1.7
ATXN3-227ENST00000554491 ENOPH1Q9UHY7 261 aa4.42□□□□□ -1.7
ATXN3-227ENST00000554491 CPSF3Q9UKF6 684 aaKnown RBP4.42□□□□□ -1.7
ATXN3-227ENST00000554491 ANGPTL2Q9UKU9 493 aa4.42□□□□□ -1.7
ATXN3-227ENST00000554491 VPS4AQ9UN37 437 aa4.42□□□□□ -1.7
ATXN3-227ENST00000554491 SLC12A4Q9UP95 1085 aa4.42□□□□□ -1.7
ATXN3-227ENST00000554491 ZNF175Q9Y473 711 aa4.42□□□□□ -1.7
ATXN3-227ENST00000554491 DCHS1Q96JQ0 3298 aa4.42□□□□□ -1.7
ATXN3-227ENST00000554491 MROH7Q68CQ1 1323 aa4.42□□□□□ -1.7
ATXN3-227ENST00000554491 WDR19Q8NEZ3 1342 aa4.42□□□□□ -1.7
ATXN3-227ENST00000554491 ATRXP46100 2492 aa4.41□□□□□ -1.7
ATXN3-227ENST00000554491 A0A1B0GTQ1 180 aa4.41□□□□□ -1.7
ATXN3-227ENST00000554491 LOC390937A0A1W2PQ73 354 aa4.41□□□□□ -1.7
ATXN3-227ENST00000554491 E2F8A0AVK6 867 aa4.41□□□□□ -1.7
ATXN3-227ENST00000554491 ARHGEF35A5YM69 484 aa4.41□□□□□ -1.7
ATXN3-227ENST00000554491 FAM172BPA6NC97 362 aa4.41□□□□□ -1.7
ATXN3-227ENST00000554491 GMNCA6NCL1 334 aa4.41□□□□□ -1.7
ATXN3-227ENST00000554491 EFCAB10A6NFE3 127 aa4.41□□□□□ -1.7
ATXN3-227ENST00000554491 KRTAP29-1A8MX34 341 aaPredicted RBP4.41□□□□□ -1.7
ATXN3-227ENST00000554491 KBTBD13C9JR72 458 aa4.41□□□□□ -1.7
ATXN3-227ENST00000554491 H0YIV9 168 aa4.41□□□□□ -1.7
ATXN3-227ENST00000554491 LAD1O00515 517 aa4.41□□□□□ -1.7
ATXN3-227ENST00000554491 NEMP1O14524 444 aa4.41□□□□□ -1.7
ATXN3-227ENST00000554491 RASGRF2O14827 1237 aa4.41□□□□□ -1.7
ATXN3-227ENST00000554491 PCDH17O14917 1159 aa4.41□□□□□ -1.7
ATXN3-227ENST00000554491 MAGEB3O15480 346 aa4.41□□□□□ -1.7
ATXN3-227ENST00000554491 TRAPPC3O43617 180 aa4.41□□□□□ -1.7
ATXN3-227ENST00000554491 BRINP1O60477 761 aa4.41□□□□□ -1.7
ATXN3-227ENST00000554491 TSPAN3O60637 253 aa4.41□□□□□ -1.7
ATXN3-227ENST00000554491 DKC1O60832 514 aaKnown RBP eCLIP4.41□□□□□ -1.7
ATXN3-227ENST00000554491 RSL1D1O76021 490 aaKnown RBP4.41□□□□□ -1.7
ATXN3-227ENST00000554491 IFNA16P05015 189 aa4.41□□□□□ -1.7
ATXN3-227ENST00000554491 RB1P06400 928 aa4.41□□□□□ -1.7
ATXN3-227ENST00000554491 ANXA6P08133 673 aa4.41□□□□□ -1.7
ATXN3-227ENST00000554491 CLTBP09497 229 aa4.41□□□□□ -1.7
ATXN3-227ENST00000554491 HSMCR30P0CW71 290 aa4.41□□□□□ -1.7
ATXN3-227ENST00000554491 RAP2AP10114 183 aa4.41□□□□□ -1.7
ATXN3-227ENST00000554491 SLC2A3P11169 496 aa4.41□□□□□ -1.7
ATXN3-227ENST00000554491 PIM1P11309 404 aaPredicted RBP4.41□□□□□ -1.7
ATXN3-227ENST00000554491 KRT5P13647 590 aa4.41□□□□□ -1.7
ATXN3-227ENST00000554491 BPIP17213 487 aa4.41□□□□□ -1.7
ATXN3-227ENST00000554491 ITGB6P18564 788 aa4.41□□□□□ -1.7
ATXN3-227ENST00000554491 CCNA2P20248 432 aa4.41□□□□□ -1.7
ATXN3-227ENST00000554491 FPR1P21462 350 aa4.41□□□□□ -1.7
ATXN3-227ENST00000554491 GCSHP23434 173 aa4.41□□□□□ -1.7
ATXN3-227ENST00000554491 ECHS1P30084 290 aa4.41□□□□□ -1.7
ATXN3-227ENST00000554491 SREBF1P36956 1147 aa4.41□□□□□ -1.7
ATXN3-227ENST00000554491 MDH1P40925 334 aaKnown RBP4.41□□□□□ -1.7
ATXN3-227ENST00000554491 HTR2BP41595 481 aa4.41□□□□□ -1.7
ATXN3-227ENST00000554491 ALDH1A3P47895 512 aa4.41□□□□□ -1.7
ATXN3-227ENST00000554491 AP2S1P53680 142 aaPredicted RBP4.41□□□□□ -1.7
ATXN3-227ENST00000554491 AIF1P55008 147 aa4.41□□□□□ -1.7
ATXN3-227ENST00000554491 AP1S2P56377 157 aa4.41□□□□□ -1.7
ATXN3-227ENST00000554491 NLRP11P59045 1033 aaKnown RBP4.41□□□□□ -1.7
ATXN3-227ENST00000554491 FOXO1Q12778 655 aa4.41□□□□□ -1.7
ATXN3-227ENST00000554491 STX3Q13277 289 aa4.41□□□□□ -1.7
ATXN3-227ENST00000554491 SCARB2Q14108 478 aa4.41□□□□□ -1.7
ATXN3-227ENST00000554491 HERC3Q15034 1050 aa4.41□□□□□ -1.7
ATXN3-227ENST00000554491 SLC39A14Q15043 492 aa4.41□□□□□ -1.7
ATXN3-227ENST00000554491 RAB30Q15771 203 aa4.41□□□□□ -1.7
ATXN3-227ENST00000554491 CCL14Q16627 93 aa4.41□□□□□ -1.7
ATXN3-227ENST00000554491 MAPK6Q16659 721 aa4.41□□□□□ -1.7
ATXN3-227ENST00000554491 CYP2A13Q16696 494 aa4.41□□□□□ -1.7
ATXN3-227ENST00000554491 ME3Q16798 604 aa4.41□□□□□ -1.7
ATXN3-227ENST00000554491 HADHQ16836 314 aaKnown RBP4.41□□□□□ -1.7
ATXN3-227ENST00000554491 SMU1Q2TAY7 513 aa4.41□□□□□ -1.7
ATXN3-227ENST00000554491 MDH1BQ5I0G3 518 aa4.41□□□□□ -1.7
ATXN3-227ENST00000554491 EFHC1Q5JVL4 640 aa4.41□□□□□ -1.7
ATXN3-227ENST00000554491 EPHA10Q5JZY3 1008 aa4.41□□□□□ -1.7
ATXN3-227ENST00000554491 C6orf10Q5SRN2 563 aa4.41□□□□□ -1.7
ATXN3-227ENST00000554491 TMEM63BQ5T3F8 832 aa4.41□□□□□ -1.7
ATXN3-227ENST00000554491 RBM20Q5T481 1227 aaKnown RBP4.41□□□□□ -1.7
ATXN3-227ENST00000554491 ZNF425Q6IV72 752 aa4.41□□□□□ -1.7
ATXN3-227ENST00000554491 ALKBH5Q6P6C2 394 aaKnown RBP4.41□□□□□ -1.7
ATXN3-227ENST00000554491 IYDQ6PHW0 289 aa4.41□□□□□ -1.7
ATXN3-227ENST00000554491 SLC39A5Q6ZMH5 540 aa4.41□□□□□ -1.7
ATXN3-227ENST00000554491 RGS9BPQ6ZS82 235 aa4.41□□□□□ -1.7
ATXN3-227ENST00000554491 STXBP4Q6ZWJ1 553 aa4.41□□□□□ -1.7
ATXN3-227ENST00000554491 MARK2Q7KZI7 788 aaKnown RBP4.41□□□□□ -1.7
ATXN3-227ENST00000554491 MIGA2Q7L4E1 593 aa4.41□□□□□ -1.7
ATXN3-227ENST00000554491 G2E3Q7L622 706 aa4.41□□□□□ -1.7
ATXN3-227ENST00000554491 NUP54Q7Z3B4 507 aa4.41□□□□□ -1.7
ATXN3-227ENST00000554491 UBE3BQ7Z3V4 1068 aa4.41□□□□□ -1.7
ATXN3-227ENST00000554491 RNF180Q86T96 592 aa4.41□□□□□ -1.7
ATXN3-227ENST00000554491 KRT73Q86Y46 540 aa4.41□□□□□ -1.7
ATXN3-227ENST00000554491 NRSN1Q8IZ57 195 aa4.41□□□□□ -1.7
ATXN3-227ENST00000554491 TCAIMQ8N3R3 496 aa4.41□□□□□ -1.7
ATXN3-227ENST00000554491 ARL14Q8N4G2 192 aa4.41□□□□□ -1.7
ATXN3-227ENST00000554491 AFAP1L2Q8N4X5 818 aa4.41□□□□□ -1.7
ATXN3-227ENST00000554491 TBC1D19Q8N5T2 526 aa4.41□□□□□ -1.7
ATXN3-227ENST00000554491 DPP10Q8N608 796 aa4.41□□□□□ -1.7
ATXN3-227ENST00000554491 ALLCQ8N6M5 410 aa4.41□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms