RNA–Protein interactions for RNA: ENST00000553340.1

SYNE3-202, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

TSL 1 (best) BASIC

Gene SYNE3, Length 2,615 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-202ENST00000553340 HAS3O00219 553 aa17.37■□□□□ 0.37
SYNE3-202ENST00000553340 CNTN5O94779 1100 aa17.37■□□□□ 0.37
SYNE3-202ENST00000553340 NCF1P14598 390 aaPredicted RBP17.37■□□□□ 0.37
SYNE3-202ENST00000553340 IL7RP16871 459 aa17.37■□□□□ 0.37
SYNE3-202ENST00000553340 BRCC3P46736 316 aa17.37■□□□□ 0.37
SYNE3-202ENST00000553340 MLLT10P55197 1068 aa17.37■□□□□ 0.37
SYNE3-202ENST00000553340 GSTM4Q03013 218 aa17.37■□□□□ 0.37
SYNE3-202ENST00000553340 EPS8Q12929 822 aa17.37■□□□□ 0.37
SYNE3-202ENST00000553340 GRB14Q14449 540 aa17.37■□□□□ 0.37
SYNE3-202ENST00000553340 TYSND1Q2T9J0 566 aa17.37■□□□□ 0.37
SYNE3-202ENST00000553340 TRIM16LQ309B1 348 aa17.37■□□□□ 0.37
SYNE3-202ENST00000553340 ALFQ53S48 1182 aa17.37■□□□□ 0.37
SYNE3-202ENST00000553340 TXNDC11Q6PKC3 985 aa17.37■□□□□ 0.37
SYNE3-202ENST00000553340 OR56A4Q8NGH8 313 aa17.37■□□□□ 0.37
SYNE3-202ENST00000553340 FUBP1Q96AE4 644 aaKnown RBP17.37■□□□□ 0.37
SYNE3-202ENST00000553340 CCDC138Q96M89 665 aa17.37■□□□□ 0.37
SYNE3-202ENST00000553340 PPM1MQ96MI6 270 aa17.37■□□□□ 0.37
SYNE3-202ENST00000553340 MAGEE1Q9HCI5 957 aa17.37■□□□□ 0.37
SYNE3-202ENST00000553340 ZNF225Q9UK10 706 aa17.37■□□□□ 0.37
SYNE3-202ENST00000553340 PCTPQ9UKL6 214 aa17.37■□□□□ 0.37
SYNE3-202ENST00000553340 IKZF3Q9UKT9 509 aa17.37■□□□□ 0.37
SYNE3-202ENST00000553340 A0A1W2PQH9 124 aa17.36■□□□□ 0.37
SYNE3-202ENST00000553340 G3V2T6 193 aa17.36■□□□□ 0.37
SYNE3-202ENST00000553340 CDC7O00311 574 aa17.36■□□□□ 0.37
SYNE3-202ENST00000553340 KPNA4O00629 521 aaPredicted RBP17.36■□□□□ 0.37
SYNE3-202ENST00000553340 TBC1D4O60343 1298 aa17.36■□□□□ 0.37
SYNE3-202ENST00000553340 CYP11A1P05108 521 aa17.36■□□□□ 0.37
SYNE3-202ENST00000553340 NFKBIAP25963 317 aa17.36■□□□□ 0.37
SYNE3-202ENST00000553340 FMO4P31512 558 aa17.36■□□□□ 0.37
SYNE3-202ENST00000553340 ATP6AP1LQ52LC2 224 aa17.36■□□□□ 0.37
SYNE3-202ENST00000553340 HABP4Q5JVS0 413 aaKnown RBP17.36■□□□□ 0.37
SYNE3-202ENST00000553340 TLK2Q86UE8 772 aa17.36■□□□□ 0.37
SYNE3-202ENST00000553340 TMCO5AQ8N6Q1 288 aa17.36■□□□□ 0.37
SYNE3-202ENST00000553340 ZNF555Q8NEP9 628 aa17.36■□□□□ 0.37
SYNE3-202ENST00000553340 ABHD11Q8NFV4 315 aa17.36■□□□□ 0.37
SYNE3-202ENST00000553340 PDE10AQ9Y233 779 aa17.36■□□□□ 0.37
SYNE3-202ENST00000553340 PDHXO00330 501 aa17.36■□□□□ 0.37
SYNE3-202ENST00000553340 TNFRSF10BO14763 440 aa17.36■□□□□ 0.37
SYNE3-202ENST00000553340 ADAM23O75077 832 aa17.36■□□□□ 0.37
SYNE3-202ENST00000553340 AGTR2P50052 363 aa17.36■□□□□ 0.37
SYNE3-202ENST00000553340 MTPNP58546 118 aa17.36■□□□□ 0.37
SYNE3-202ENST00000553340 OCA2Q04671 838 aa17.36■□□□□ 0.37
SYNE3-202ENST00000553340 CYP2A13Q16696 494 aa17.36■□□□□ 0.37
SYNE3-202ENST00000553340 PRAMEF19Q5SWL8 479 aa17.36■□□□□ 0.37
SYNE3-202ENST00000553340 C6orf141Q5SZD1 244 aa17.36■□□□□ 0.37
SYNE3-202ENST00000553340 UGT3A1Q6NUS8 523 aa17.36■□□□□ 0.37
SYNE3-202ENST00000553340 CRTC3Q6UUV7 619 aa17.36■□□□□ 0.37
SYNE3-202ENST00000553340 DLEU7Q6UYE1 221 aa17.36■□□□□ 0.37
SYNE3-202ENST00000553340 SPATA2LQ8IUW3 424 aaPredicted RBP17.36■□□□□ 0.37
SYNE3-202ENST00000553340 FUNDC2Q9BWH2 189 aa17.36■□□□□ 0.37
SYNE3-202ENST00000553340 POLR1EQ9GZS1 481 aaKnown RBP17.36■□□□□ 0.37
SYNE3-202ENST00000553340 FAM118AQ9NWS6 357 aa17.36■□□□□ 0.37
SYNE3-202ENST00000553340 TLR6Q9Y2C9 796 aa17.36■□□□□ 0.37
SYNE3-202ENST00000553340 PCDHGA8Q9Y5G5 932 aa17.36■□□□□ 0.37
SYNE3-202ENST00000553340 NPEPPSL1A6NEC2 478 aa17.35■□□□□ 0.37
SYNE3-202ENST00000553340 BTN3A1O00481 513 aa17.35■□□□□ 0.37
SYNE3-202ENST00000553340 ENPP3O14638 875 aa17.35■□□□□ 0.37
SYNE3-202ENST00000553340 PIRTP0C851 137 aa17.35■□□□□ 0.37
SYNE3-202ENST00000553340 GGT1P19440 569 aa17.35■□□□□ 0.37
SYNE3-202ENST00000553340 JAK1P23458 1154 aa17.35■□□□□ 0.37
SYNE3-202ENST00000553340 GABARAPL2P60520 117 aa17.35■□□□□ 0.37
SYNE3-202ENST00000553340 TSPY1Q01534 308 aa17.35■□□□□ 0.37
SYNE3-202ENST00000553340 GALNT3Q14435 633 aa17.35■□□□□ 0.37
SYNE3-202ENST00000553340 IMPG1Q17R60 797 aa17.35■□□□□ 0.37
SYNE3-202ENST00000553340 SETMARQ53H47 684 aaPredicted RBP17.35■□□□□ 0.37
SYNE3-202ENST00000553340 OVOS1Q6IE37 1185 aa17.35■□□□□ 0.37
SYNE3-202ENST00000553340 GPRIN3Q6ZVF9 776 aa17.35■□□□□ 0.37
SYNE3-202ENST00000553340 ZNF683Q8IZ20 524 aa17.35■□□□□ 0.37
SYNE3-202ENST00000553340 AADATQ8N5Z0 425 aa17.35■□□□□ 0.37
SYNE3-202ENST00000553340 SGCDQ92629 289 aa17.35■□□□□ 0.37
SYNE3-202ENST00000553340 CDKN2AIPNLQ96HQ2 116 aa17.35■□□□□ 0.37
SYNE3-202ENST00000553340 UGT2B28Q9BY64 529 aa17.35■□□□□ 0.37
SYNE3-202ENST00000553340 GALPQ9UBC7 116 aa17.35■□□□□ 0.37
SYNE3-202ENST00000553340 ST3GAL5Q9UNP4 418 aa17.35■□□□□ 0.37
SYNE3-202ENST00000553340 GIT1Q9Y2X7 761 aa17.35■□□□□ 0.37
SYNE3-202ENST00000553340 CLDN25C9JDP6 229 aa17.35■□□□□ 0.37
SYNE3-202ENST00000553340 KLK8O60259 260 aa17.35■□□□□ 0.37
SYNE3-202ENST00000553340 BCAS1O75363 584 aaPredicted RBP17.35■□□□□ 0.37
SYNE3-202ENST00000553340 EPOP01588 193 aa17.35■□□□□ 0.37
SYNE3-202ENST00000553340 PRSS56P0CW18 603 aa17.35■□□□□ 0.37
SYNE3-202ENST00000553340 PBX3P40426 434 aa17.35■□□□□ 0.37
SYNE3-202ENST00000553340 IL10RBQ08334 325 aa17.35■□□□□ 0.37
SYNE3-202ENST00000553340 SELPLGQ14242 412 aa17.35■□□□□ 0.37
SYNE3-202ENST00000553340 ZNF846Q147U1 533 aa17.35■□□□□ 0.37
SYNE3-202ENST00000553340 MS4A13Q5J8X5 152 aa17.35■□□□□ 0.37
SYNE3-202ENST00000553340 THEM5Q8N1Q8 247 aa17.35■□□□□ 0.37
SYNE3-202ENST00000553340 NKAPQ8N5F7 415 aaKnown RBP17.35■□□□□ 0.37
SYNE3-202ENST00000553340 CHDHQ8NE62 594 aaPredicted RBP17.35■□□□□ 0.37
SYNE3-202ENST00000553340 NPLOC4Q8TAT6 608 aa17.35■□□□□ 0.37
SYNE3-202ENST00000553340 FKBP10Q96AY3 582 aa17.35■□□□□ 0.37
SYNE3-202ENST00000553340 CGREF1Q99674 301 aa17.35■□□□□ 0.37
SYNE3-202ENST00000553340 BAG5Q9UL15 447 aa17.35■□□□□ 0.37
SYNE3-202ENST00000553340 RIMKLBQ9ULI2 386 aa17.35■□□□□ 0.37
SYNE3-202ENST00000553340 MED16Q9Y2X0 877 aa17.35■□□□□ 0.37
SYNE3-202ENST00000553340 SNX5Q9Y5X3 404 aa17.35■□□□□ 0.37
SYNE3-202ENST00000553340 ARNTLO00327 626 aa17.34■□□□□ 0.37
SYNE3-202ENST00000553340 GJB3O75712 270 aa17.34■□□□□ 0.37
SYNE3-202ENST00000553340 OPRL1P41146 370 aa17.34■□□□□ 0.37
SYNE3-202ENST00000553340 HALP42357 657 aa17.34■□□□□ 0.37
SYNE3-202ENST00000553340 SPCS2Q15005 226 aa17.34■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms