RNA–Protein interactions for RNA: ENST00000550519.5

SMARCC2-210, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, humanhuman

TSL 3

Gene SMARCC2, Length 789 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2-210ENST00000550519 DOPEY2Q9Y3R5 2298 aa21.31■■□□□ 1
SMARCC2-210ENST00000550519 A0A0A6YYK5 440 aaPredicted RBP21.3■■□□□ 1
SMARCC2-210ENST00000550519 PMPCBO75439 489 aa21.3■■□□□ 1
SMARCC2-210ENST00000550519 RASSF9O75901 435 aa21.3■■□□□ 1
SMARCC2-210ENST00000550519 KIAA0754O94854 1291 aa21.3■■□□□ 1
SMARCC2-210ENST00000550519 NDUFA10O95299 355 aa21.3■■□□□ 1
SMARCC2-210ENST00000550519 PTPN3P26045 913 aa21.3■■□□□ 1
SMARCC2-210ENST00000550519 HMGCLP35914 325 aa21.3■■□□□ 1
SMARCC2-210ENST00000550519 LACTB2Q53H82 288 aaPredicted RBP21.3■■□□□ 1
SMARCC2-210ENST00000550519 CACHD1Q5VU97 1274 aa21.3■■□□□ 1
SMARCC2-210ENST00000550519 OR8K1Q8NGG5 319 aa21.3■■□□□ 1
SMARCC2-210ENST00000550519 DTX3LQ8TDB6 740 aa21.3■■□□□ 1
SMARCC2-210ENST00000550519 CXorf40BQ96DE9 158 aa21.3■■□□□ 1
SMARCC2-210ENST00000550519 ZDHHC12Q96GR4 267 aa21.3■■□□□ 1
SMARCC2-210ENST00000550519 DEF6Q9H4E7 631 aa21.3■■□□□ 1
SMARCC2-210ENST00000550519 BPIFA1Q9NP55 256 aa21.3■■□□□ 1
SMARCC2-210ENST00000550519 SEMA5BQ9P283 1151 aa21.3■■□□□ 1
SMARCC2-210ENST00000550519 WDR37Q9Y2I8 494 aa21.3■■□□□ 1
SMARCC2-210ENST00000550519 SPAG6O75602 509 aa21.29■■□□□ 1
SMARCC2-210ENST00000550519 KRT1P04264 644 aa21.29■■□□□ 1
SMARCC2-210ENST00000550519 VCLP18206 1134 aa21.29■■□□□ 1
SMARCC2-210ENST00000550519 NELFEP18615 380 aaKnown RBP21.29■■□□□ 1
SMARCC2-210ENST00000550519 LARP7Q4G0J3 582 aaKnown RBP eCLIP21.29■■□□□ 1
SMARCC2-210ENST00000550519 RFX6Q8HWS3 928 aa21.29■■□□□ 1
SMARCC2-210ENST00000550519 TRAPPC5Q8IUR0 188 aa21.29■■□□□ 1
SMARCC2-210ENST00000550519 RASGRP3Q8IV61 690 aa21.29■■□□□ 1
SMARCC2-210ENST00000550519 BRSK1Q8TDC3 778 aa21.29■■□□□ 1
SMARCC2-210ENST00000550519 RNF25Q96BH1 459 aaPredicted RBP21.29■■□□□ 1
SMARCC2-210ENST00000550519 STAMBPL1Q96FJ0 436 aa21.29■■□□□ 1
SMARCC2-210ENST00000550519 ELMO2Q96JJ3 720 aa21.29■■□□□ 1
SMARCC2-210ENST00000550519 IL26Q9NPH9 171 aa21.29■■□□□ 1
SMARCC2-210ENST00000550519 UBP1Q9NZI7 540 aa21.29■■□□□ 1
SMARCC2-210ENST00000550519 TRIM10Q9UDY6 481 aa21.29■■□□□ 1
SMARCC2-210ENST00000550519 RELNP78509 3460 aa21.28■■□□□ 1
SMARCC2-210ENST00000550519 LOC285095A0A1B0GVY8 99 aa21.28■■□□□ 1
SMARCC2-210ENST00000550519 AKR1B10O60218 316 aa21.28■■□□□ 1
SMARCC2-210ENST00000550519 KCNJ13O60928 360 aa21.28■■□□□ 1
SMARCC2-210ENST00000550519 FURINP09958 794 aa21.28■■□□□ 1
SMARCC2-210ENST00000550519 CD68P34810 354 aaPredicted RBP21.28■■□□□ 1
SMARCC2-210ENST00000550519 DYNLT1P63172 113 aa21.28■■□□□ 1
SMARCC2-210ENST00000550519 UBAP2LQ14157 1087 aaKnown RBP21.28■■□□□ 1
SMARCC2-210ENST00000550519 PRKD1Q15139 912 aaPredicted RBP21.28■■□□□ 1
SMARCC2-210ENST00000550519 FAM92BQ6ZTR7 304 aa21.28■■□□□ 1
SMARCC2-210ENST00000550519 PPP1R3BQ86XI6 285 aa21.28■■□□□ 1
SMARCC2-210ENST00000550519 RHOT2Q8IXI1 618 aa21.28■■□□□ 1
SMARCC2-210ENST00000550519 TTC30BQ8N4P2 665 aa21.28■■□□□ 1
SMARCC2-210ENST00000550519 TRABDQ9H4I3 376 aa21.28■■□□□ 1
SMARCC2-210ENST00000550519 ANKMY1Q9P2S6 941 aa21.28■■□□□ 1
SMARCC2-210ENST00000550519 FAM153AQ9UHL3 310 aa21.28■■□□□ 1
SMARCC2-210ENST00000550519 KCND3Q9UK17 655 aa21.28■■□□□ 1
SMARCC2-210ENST00000550519 POLHQ9Y253 713 aa21.28■■□□□ 1
SMARCC2-210ENST00000550519 TP53TG5Q9Y2B4 290 aa21.28■■□□□ 1
SMARCC2-210ENST00000550519 PCDHGA6Q9Y5G7 932 aa21.28■■□□□ 1
SMARCC2-210ENST00000550519 CLEC18AA5D8T8 446 aa21.27■■□□□ 1
SMARCC2-210ENST00000550519 RECKO95980 971 aa21.27■■□□□ 1
SMARCC2-210ENST00000550519 EPOP01588 193 aa21.27■■□□□ 1
SMARCC2-210ENST00000550519 HALP42357 657 aa21.27■■□□□ 1
SMARCC2-210ENST00000550519 NR2C2P49116 596 aa21.27■■□□□ 1
SMARCC2-210ENST00000550519 DMPKQ09013 629 aa21.27■■□□□ 1
SMARCC2-210ENST00000550519 WASHC5Q12768 1159 aa21.27■■□□□ 1
SMARCC2-210ENST00000550519 GTF2H3Q13889 308 aa21.27■■□□□ 1
SMARCC2-210ENST00000550519 ERV3-1Q14264 604 aa21.27■■□□□ 1
SMARCC2-210ENST00000550519 NOMO1Q15155 1222 aa21.27■■□□□ 1
SMARCC2-210ENST00000550519 ZDHHC20Q5W0Z9 365 aa21.27■■□□□ 1
SMARCC2-210ENST00000550519 TCTN3Q6NUS6 607 aa21.27■■□□□ 1
SMARCC2-210ENST00000550519 IRGCQ6NXR0 463 aa21.27■■□□□ 1
SMARCC2-210ENST00000550519 KDELC1Q6UW63 502 aa21.27■■□□□ 1
SMARCC2-210ENST00000550519 MFSD7Q6UXD7 560 aa21.27■■□□□ 1
SMARCC2-210ENST00000550519 CLEC18BQ6UXF7 455 aa21.27■■□□□ 1
SMARCC2-210ENST00000550519 CLEC18CQ8NCF0 446 aa21.27■■□□□ 1
SMARCC2-210ENST00000550519 GDAP1Q8TB36 358 aa21.27■■□□□ 1
SMARCC2-210ENST00000550519 SLC41A2Q96JW4 573 aa21.27■■□□□ 1
SMARCC2-210ENST00000550519 DDX56Q9NY93 547 aaKnown RBP21.27■■□□□ 1
SMARCC2-210ENST00000550519 IL17CQ9P0M4 197 aa21.27■■□□□ 1
SMARCC2-210ENST00000550519 LNPEPQ9UIQ6 1025 aa21.27■■□□□ 1
SMARCC2-210ENST00000550519 PADI1Q9ULC6 663 aa21.27■■□□□ 1
SMARCC2-210ENST00000550519 K7EM74 188 aa21.26■□□□□ 0.99
SMARCC2-210ENST00000550519 KATNA1O75449 491 aa21.26■□□□□ 0.99
SMARCC2-210ENST00000550519 MT-ND3P03897 115 aa21.26■□□□□ 0.99
SMARCC2-210ENST00000550519 TPM3P06753 285 aa21.26■□□□□ 0.99
SMARCC2-210ENST00000550519 CCNYL3P0C7X3 344 aa21.26■□□□□ 0.99
SMARCC2-210ENST00000550519 FECHP22830 423 aa21.26■□□□□ 0.99
SMARCC2-210ENST00000550519 SLC1A1P43005 524 aa21.26■□□□□ 0.99
SMARCC2-210ENST00000550519 WNT3AP56704 352 aa21.26■□□□□ 0.99
SMARCC2-210ENST00000550519 PPP1CAP62136 330 aa21.26■□□□□ 0.99
SMARCC2-210ENST00000550519 KLRB1Q12918 225 aa21.26■□□□□ 0.99
SMARCC2-210ENST00000550519 TAZQ16635 292 aa21.26■□□□□ 0.99
SMARCC2-210ENST00000550519 CYB5D1Q6P9G0 228 aa21.26■□□□□ 0.99
SMARCC2-210ENST00000550519 BZW1Q7L1Q6 419 aaKnown RBP21.26■□□□□ 0.99
SMARCC2-210ENST00000550519 AMZ2Q86W34 360 aa21.26■□□□□ 0.99
SMARCC2-210ENST00000550519 RHOT1Q8IXI2 618 aa21.26■□□□□ 0.99
SMARCC2-210ENST00000550519 UBXN4Q92575 508 aa21.26■□□□□ 0.99
SMARCC2-210ENST00000550519 TTC25Q96NG3 672 aa21.26■□□□□ 0.99
SMARCC2-210ENST00000550519 CHP1Q99653 195 aa21.26■□□□□ 0.99
SMARCC2-210ENST00000550519 LHX9Q9NQ69 397 aa21.26■□□□□ 0.99
SMARCC2-210ENST00000550519 SAE1Q9UBE0 346 aaPredicted RBP21.26■□□□□ 0.99
SMARCC2-210ENST00000550519 IGHV5-51A0A0C4DH38 117 aa21.25■□□□□ 0.99
SMARCC2-210ENST00000550519 MKRN2OSH3BPM6 223 aa21.25■□□□□ 0.99
SMARCC2-210ENST00000550519 CREG1O75629 220 aa21.25■□□□□ 0.99
SMARCC2-210ENST00000550519 POP7O75817 140 aaKnown RBP21.25■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms