RNA–Protein interactions for RNA: ENST00000545738.6

LIMS2-217, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 5 BASIC

Gene LIMS2, Length 1,730 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-217ENST00000545738 MCMBPQ9BTE3 642 aa16.06■□□□□ 0.16
LIMS2-217ENST00000545738 VPS37BQ9H9H4 285 aa16.06■□□□□ 0.16
LIMS2-217ENST00000545738 PPANQ9NQ55 473 aaKnown RBP16.06■□□□□ 0.16
LIMS2-217ENST00000545738 APOBEC3BQ9UH17 382 aaKnown RBP16.06■□□□□ 0.16
LIMS2-217ENST00000545738 FBXO5Q9UKT4 447 aa16.06■□□□□ 0.16
LIMS2-217ENST00000545738 CRYL1Q9Y2S2 319 aa16.06■□□□□ 0.16
LIMS2-217ENST00000545738 MED16Q9Y2X0 877 aa16.06■□□□□ 0.16
LIMS2-217ENST00000545738 FAM159BA6NKW6 160 aa16.05■□□□□ 0.16
LIMS2-217ENST00000545738 GRID2O43424 1007 aa16.05■□□□□ 0.16
LIMS2-217ENST00000545738 VEGFDO43915 354 aa16.05■□□□□ 0.16
LIMS2-217ENST00000545738 MAGEC1O60732 1142 aa16.05■□□□□ 0.16
LIMS2-217ENST00000545738 PIAS2O75928 621 aa16.05■□□□□ 0.16
LIMS2-217ENST00000545738 RASGRP1O95267 797 aa16.05■□□□□ 0.16
LIMS2-217ENST00000545738 AHSGP02765 367 aa16.05■□□□□ 0.16
LIMS2-217ENST00000545738 MSH3P20585 1137 aa16.05■□□□□ 0.16
LIMS2-217ENST00000545738 KELP23276 732 aa16.05■□□□□ 0.16
LIMS2-217ENST00000545738 RXRGP48443 463 aa16.05■□□□□ 0.16
LIMS2-217ENST00000545738 PGGT1BP53609 377 aa16.05■□□□□ 0.16
LIMS2-217ENST00000545738 THOC5Q13769 683 aaKnown RBP16.05■□□□□ 0.16
LIMS2-217ENST00000545738 ITIH4Q14624 930 aa16.05■□□□□ 0.16
LIMS2-217ENST00000545738 UAP1Q16222 522 aaPredicted RBP16.05■□□□□ 0.16
LIMS2-217ENST00000545738 KBTBD12Q3ZCT8 623 aa16.05■□□□□ 0.16
LIMS2-217ENST00000545738 ZNF658BQ4V348 819 aaPredicted RBP16.05■□□□□ 0.16
LIMS2-217ENST00000545738 PRRT3Q5FWE3 981 aa16.05■□□□□ 0.16
LIMS2-217ENST00000545738 MRNIPQ6NTE8 343 aa16.05■□□□□ 0.16
LIMS2-217ENST00000545738 TMEM220Q6QAJ8 160 aa16.05■□□□□ 0.16
LIMS2-217ENST00000545738 NAPRTQ6XQN6 538 aa16.05■□□□□ 0.16
LIMS2-217ENST00000545738 CERS6Q6ZMG9 384 aa16.05■□□□□ 0.16
LIMS2-217ENST00000545738 SLC25A45Q8N413 288 aa16.05■□□□□ 0.16
LIMS2-217ENST00000545738 ZNF548Q8NEK5 533 aaPredicted RBP16.05■□□□□ 0.16
LIMS2-217ENST00000545738 ACVR1CQ8NER5 493 aa16.05■□□□□ 0.16
LIMS2-217ENST00000545738 ZNHIT2Q9UHR6 403 aa16.05■□□□□ 0.16
LIMS2-217ENST00000545738 CEP250Q9BV73 2442 aa16.05■□□□□ 0.16
LIMS2-217ENST00000545738 PRR19A6NJB7 356 aa16.05■□□□□ 0.16
LIMS2-217ENST00000545738 LRP3O75074 770 aa16.05■□□□□ 0.16
LIMS2-217ENST00000545738 DGKAP23743 735 aa16.05■□□□□ 0.16
LIMS2-217ENST00000545738 EPHA8P29322 1005 aaPredicted RBP16.05■□□□□ 0.16
LIMS2-217ENST00000545738 TTPAP49638 278 aa16.05■□□□□ 0.16
LIMS2-217ENST00000545738 MGAT5Q09328 741 aa16.05■□□□□ 0.16
LIMS2-217ENST00000545738 FAM83HQ6ZRV2 1179 aaPredicted RBP16.05■□□□□ 0.16
LIMS2-217ENST00000545738 CHST15Q7LFX5 561 aaPredicted RBP16.05■□□□□ 0.16
LIMS2-217ENST00000545738 TRAPPC5Q8IUR0 188 aa16.05■□□□□ 0.16
LIMS2-217ENST00000545738 SAP25Q8TEE9 199 aa16.05■□□□□ 0.16
LIMS2-217ENST00000545738 SKA1Q96BD8 255 aa16.05■□□□□ 0.16
LIMS2-217ENST00000545738 EDEM2Q9BV94 578 aa16.05■□□□□ 0.16
LIMS2-217ENST00000545738 GALPQ9UBC7 116 aa16.05■□□□□ 0.16
LIMS2-217ENST00000545738 RABGEF1Q9UJ41 708 aa16.05■□□□□ 0.16
LIMS2-217ENST00000545738 GPSM3Q9Y4H4 160 aa16.05■□□□□ 0.16
LIMS2-217ENST00000545738 GOLGA4Q13439 2230 aaKnown RBP16.04■□□□□ 0.16
LIMS2-217ENST00000545738 CTIFO43310 598 aaKnown RBP16.04■□□□□ 0.16
LIMS2-217ENST00000545738 RIPK2O43353 540 aa16.04■□□□□ 0.16
LIMS2-217ENST00000545738 FAM155BO75949 473 aa16.04■□□□□ 0.16
LIMS2-217ENST00000545738 EML2O95834 649 aa16.04■□□□□ 0.16
LIMS2-217ENST00000545738 ACP5P13686 325 aa16.04■□□□□ 0.16
LIMS2-217ENST00000545738 PMLP29590 882 aa16.04■□□□□ 0.16
LIMS2-217ENST00000545738 NSG1P42857 185 aa16.04■□□□□ 0.16
LIMS2-217ENST00000545738 LEPRP48357 1165 aaKnown RBP16.04■□□□□ 0.16
LIMS2-217ENST00000545738 PRLHRP49683 370 aa16.04■□□□□ 0.16
LIMS2-217ENST00000545738 PMS2P54278 862 aa16.04■□□□□ 0.16
LIMS2-217ENST00000545738 TIAL1Q01085 375 aaKnown RBP eCLIP16.04■□□□□ 0.16
LIMS2-217ENST00000545738 CTBSQ01459 385 aa16.04■□□□□ 0.16
LIMS2-217ENST00000545738 CYS1Q717R9 158 aa16.04■□□□□ 0.16
LIMS2-217ENST00000545738 GALNT13Q8IUC8 556 aa16.04■□□□□ 0.16
LIMS2-217ENST00000545738 KRT222Q8N1A0 295 aa16.04■□□□□ 0.16
LIMS2-217ENST00000545738 FAM136AQ96C01 138 aa16.04■□□□□ 0.16
LIMS2-217ENST00000545738 OR2M4Q96R27 311 aa16.04■□□□□ 0.16
LIMS2-217ENST00000545738 FAM167BQ9BTA0 163 aa16.04■□□□□ 0.16
LIMS2-217ENST00000545738 FUT8Q9BYC5 575 aa16.04■□□□□ 0.16
LIMS2-217ENST00000545738 ZDHHC5Q9C0B5 715 aa16.04■□□□□ 0.16
LIMS2-217ENST00000545738 TSPYL1Q9H0U9 437 aa16.04■□□□□ 0.16
LIMS2-217ENST00000545738 KCNK6Q9Y257 313 aa16.04■□□□□ 0.16
LIMS2-217ENST00000545738 UBA6A0AVT1 1052 aaPredicted RBP16.03■□□□□ 0.16
LIMS2-217ENST00000545738 PRMT5O14744 637 aaPredicted RBP16.03■□□□□ 0.16
LIMS2-217ENST00000545738 SYPP08247 313 aa16.03■□□□□ 0.16
LIMS2-217ENST00000545738 PBLDP30039 288 aaPredicted RBP16.03■□□□□ 0.16
LIMS2-217ENST00000545738 FMO4P31512 558 aa16.03■□□□□ 0.16
LIMS2-217ENST00000545738 EIF3BP55884 814 aaKnown RBP16.03■□□□□ 0.16
LIMS2-217ENST00000545738 SLMAPQ14BN4 828 aa16.03■□□□□ 0.16
LIMS2-217ENST00000545738 BCL7AQ4VC05 210 aa16.03■□□□□ 0.16
LIMS2-217ENST00000545738 AARS2Q5JTZ9 985 aaKnown RBP16.03■□□□□ 0.16
LIMS2-217ENST00000545738 RBM20Q5T481 1227 aaKnown RBP16.03■□□□□ 0.16
LIMS2-217ENST00000545738 LRRTM4Q86VH4 590 aa16.03■□□□□ 0.16
LIMS2-217ENST00000545738 TBRG4Q969Z0 631 aaKnown RBP eCLIP16.03■□□□□ 0.16
LIMS2-217ENST00000545738 TTC25Q96NG3 672 aa16.03■□□□□ 0.16
LIMS2-217ENST00000545738 ZFATQ9P243 1243 aa16.03■□□□□ 0.16
LIMS2-217ENST00000545738 BTBD3Q9Y2F9 522 aa16.03■□□□□ 0.16
LIMS2-217ENST00000545738 DNAJC16Q9Y2G8 782 aa16.03■□□□□ 0.16
LIMS2-217ENST00000545738 WDFY3Q8IZQ1 3526 aa16.03■□□□□ 0.16
LIMS2-217ENST00000545738 PIEZO1Q92508 2521 aa16.03■□□□□ 0.16
LIMS2-217ENST00000545738 GPR89AB7ZAQ6 455 aa16.02■□□□□ 0.16
LIMS2-217ENST00000545738 GFRA3O60609 400 aa16.02■□□□□ 0.16
LIMS2-217ENST00000545738 NIPSNAP2O75323 286 aa16.02■□□□□ 0.16
LIMS2-217ENST00000545738 NDUFS3O75489 264 aa16.02■□□□□ 0.16
LIMS2-217ENST00000545738 CER1O95813 267 aa16.02■□□□□ 0.16
LIMS2-217ENST00000545738 TNFP01375 233 aa16.02■□□□□ 0.16
LIMS2-217ENST00000545738 GSTA2P09210 222 aa16.02■□□□□ 0.16
LIMS2-217ENST00000545738 GPR89BP0CG08 455 aa16.02■□□□□ 0.16
LIMS2-217ENST00000545738 ITGB6P18564 788 aa16.02■□□□□ 0.16
LIMS2-217ENST00000545738 NFE2L1Q14494 772 aa16.02■□□□□ 0.16
LIMS2-217ENST00000545738 LYPLAL1Q5VWZ2 237 aa16.02■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms