RNA–Protein interactions for RNA: ENST00000543473.1

SUDS3-204, Transcript of SDS3 homolog, SIN3A corepressor complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SUDS3, Length 4,897 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUDS3-204ENST00000543473 ZDHHC21Q8IVQ6 265 aa19.19■□□□□ 0.66
SUDS3-204ENST00000543473 SLC38A2Q96QD8 506 aa19.19■□□□□ 0.66
SUDS3-204ENST00000543473 AHDC1Q5TGY3 1603 aaPredicted RBP19.18■□□□□ 0.66
SUDS3-204ENST00000543473 KAT6AQ92794 2004 aa19.18■□□□□ 0.66
SUDS3-204ENST00000543473 TP73O15350 636 aa19.18■□□□□ 0.66
SUDS3-204ENST00000543473 MSI1O43347 362 aaKnown RBP19.18■□□□□ 0.66
SUDS3-204ENST00000543473 SGTAO43765 313 aa19.18■□□□□ 0.66
SUDS3-204ENST00000543473 DHFRP00374 187 aa19.18■□□□□ 0.66
SUDS3-204ENST00000543473 CD36P16671 472 aa19.18■□□□□ 0.66
SUDS3-204ENST00000543473 ZNF182P17025 639 aaPredicted RBP19.18■□□□□ 0.66
SUDS3-204ENST00000543473 EEFSECP57772 596 aaKnown RBP19.18■□□□□ 0.66
SUDS3-204ENST00000543473 RBM12BQ8IXT5 1001 aaKnown RBP19.18■□□□□ 0.66
SUDS3-204ENST00000543473 COPS4Q9BT78 406 aa19.18■□□□□ 0.66
SUDS3-204ENST00000543473 HMGXB4Q9UGU5 601 aa19.18■□□□□ 0.66
SUDS3-204ENST00000543473 PRMT5O14744 637 aaPredicted RBP19.18■□□□□ 0.66
SUDS3-204ENST00000543473 XKR6Q5GH73 641 aa19.18■□□□□ 0.66
SUDS3-204ENST00000543473 SIAH1Q8IUQ4 282 aa19.18■□□□□ 0.66
SUDS3-204ENST00000543473 RTL3Q8N8U3 475 aaKnown RBP19.18■□□□□ 0.66
SUDS3-204ENST00000543473 OR9I1Q8NGQ6 314 aa19.18■□□□□ 0.66
SUDS3-204ENST00000543473 PIK3R3Q92569 461 aa19.18■□□□□ 0.66
SUDS3-204ENST00000543473 TM6SF2Q9BZW4 377 aa19.18■□□□□ 0.66
SUDS3-204ENST00000543473 SLC25A51Q9H1U9 297 aa19.18■□□□□ 0.66
SUDS3-204ENST00000543473 SERPINA4P29622 427 aa19.18■□□□□ 0.66
SUDS3-204ENST00000543473 ATP5C1P36542 298 aaKnown RBP19.18■□□□□ 0.66
SUDS3-204ENST00000543473 ZNF420Q8TAQ5 688 aaPredicted RBP19.18■□□□□ 0.66
SUDS3-204ENST00000543473 ATL1Q8WXF7 558 aa19.18■□□□□ 0.66
SUDS3-204ENST00000543473 TMCO6Q96DC7 493 aa19.18■□□□□ 0.66
SUDS3-204ENST00000543473 NSMCE3Q96MG7 304 aa19.18■□□□□ 0.66
SUDS3-204ENST00000543473 DPEP3Q9H4B8 488 aa19.18■□□□□ 0.66
SUDS3-204ENST00000543473 AKTIPQ9H8T0 292 aa19.18■□□□□ 0.66
SUDS3-204ENST00000543473 SMIM28A0A1B0GU29 152 aa19.18■□□□□ 0.66
SUDS3-204ENST00000543473 MATN3O15232 486 aa19.18■□□□□ 0.66
SUDS3-204ENST00000543473 PSIP1O75475 530 aaKnown RBP19.18■□□□□ 0.66
SUDS3-204ENST00000543473 IMPDH1P20839 514 aa19.18■□□□□ 0.66
SUDS3-204ENST00000543473 CCL23P55773 120 aa19.18■□□□□ 0.66
SUDS3-204ENST00000543473 CLEC4CQ8WTT0 213 aa19.18■□□□□ 0.66
SUDS3-204ENST00000543473 FBXL20Q96IG2 436 aa19.18■□□□□ 0.66
SUDS3-204ENST00000543473 PDZD7Q9H5P4 517 aa19.18■□□□□ 0.66
SUDS3-204ENST00000543473 CCDC59Q9P031 241 aaKnown RBP19.18■□□□□ 0.66
SUDS3-204ENST00000543473 ACTR3BQ9P1U1 418 aa19.18■□□□□ 0.66
SUDS3-204ENST00000543473 E7ESA3 106 aa19.17■□□□□ 0.66
SUDS3-204ENST00000543473 AP2A2O94973 939 aa19.17■□□□□ 0.66
SUDS3-204ENST00000543473 CLIC3O95833 236 aa19.17■□□□□ 0.66
SUDS3-204ENST00000543473 DET1Q7L5Y6 550 aa19.17■□□□□ 0.66
SUDS3-204ENST00000543473 KRT74Q7RTS7 529 aa19.17■□□□□ 0.66
SUDS3-204ENST00000543473 OR5K1Q8NHB7 308 aa19.17■□□□□ 0.66
SUDS3-204ENST00000543473 ITM2BQ9Y287 266 aa19.17■□□□□ 0.66
SUDS3-204ENST00000543473 SMIM35A0A1B0GVV1 85 aa19.17■□□□□ 0.66
SUDS3-204ENST00000543473 TNFRSF11BO00300 401 aa19.17■□□□□ 0.66
SUDS3-204ENST00000543473 RPLP0P05388 317 aaKnown RBP19.17■□□□□ 0.66
SUDS3-204ENST00000543473 CDH1P12830 882 aa19.17■□□□□ 0.66
SUDS3-204ENST00000543473 DARSP14868 501 aaKnown RBP19.17■□□□□ 0.66
SUDS3-204ENST00000543473 PTPN5P54829 565 aa19.17■□□□□ 0.66
SUDS3-204ENST00000543473 DSC2Q02487 901 aa19.17■□□□□ 0.66
SUDS3-204ENST00000543473 LGALS3BPQ08380 585 aa19.17■□□□□ 0.66
SUDS3-204ENST00000543473 COLEC12Q5KU26 742 aa19.17■□□□□ 0.66
SUDS3-204ENST00000543473 NCBP2-AS2Q69YL0 99 aa19.17■□□□□ 0.66
SUDS3-204ENST00000543473 NEK5Q6P3R8 708 aa19.17■□□□□ 0.66
SUDS3-204ENST00000543473 SLC39A4Q6P5W5 647 aa19.17■□□□□ 0.66
SUDS3-204ENST00000543473 GPR65Q8IYL9 337 aa19.17■□□□□ 0.66
SUDS3-204ENST00000543473 ESAMQ96AP7 390 aa19.17■□□□□ 0.66
SUDS3-204ENST00000543473 NUSAP1Q9BXS6 441 aaKnown RBP19.17■□□□□ 0.66
SUDS3-204ENST00000543473 MAF1Q9H063 256 aa19.17■□□□□ 0.66
SUDS3-204ENST00000543473 AASDHPPTQ9NRN7 309 aa19.17■□□□□ 0.66
SUDS3-204ENST00000543473 AGO1Q9UL18 857 aaKnown RBP19.17■□□□□ 0.66
SUDS3-204ENST00000543473 RAB23Q9ULC3 237 aa19.17■□□□□ 0.66
SUDS3-204ENST00000543473 C8BP07358 591 aa19.17■□□□□ 0.66
SUDS3-204ENST00000543473 TIE1P35590 1138 aa19.17■□□□□ 0.66
SUDS3-204ENST00000543473 BCAP31P51572 246 aa19.17■□□□□ 0.66
SUDS3-204ENST00000543473 PRKAG1P54619 331 aa19.17■□□□□ 0.66
SUDS3-204ENST00000543473 PABPC1LQ4VXU2 614 aaKnown RBP19.17■□□□□ 0.66
SUDS3-204ENST00000543473 RBFAQ8N0V3 343 aa19.17■□□□□ 0.66
SUDS3-204ENST00000543473 CNTN3Q9P232 1028 aa19.17■□□□□ 0.66
SUDS3-204ENST00000543473 PCDHB9Q9Y5E1 797 aa19.17■□□□□ 0.66
SUDS3-204ENST00000543473 PSAT1Q9Y617 370 aa19.17■□□□□ 0.66
SUDS3-204ENST00000543473 A8MT66 165 aa19.17■□□□□ 0.66
SUDS3-204ENST00000543473 BOLA2-SMG1P6H3BVE0 249 aa19.17■□□□□ 0.66
SUDS3-204ENST00000543473 SLC7A4O43246 635 aa19.17■□□□□ 0.66
SUDS3-204ENST00000543473 FKTNO75072 461 aa19.17■□□□□ 0.66
SUDS3-204ENST00000543473 FMO3P31513 532 aa19.17■□□□□ 0.66
SUDS3-204ENST00000543473 GSK3BP49841 420 aa19.17■□□□□ 0.66
SUDS3-204ENST00000543473 NPTX1Q15818 432 aa19.17■□□□□ 0.66
SUDS3-204ENST00000543473 ANXA8L1Q5VT79 327 aa19.17■□□□□ 0.66
SUDS3-204ENST00000543473 SLC9A7Q96T83 725 aa19.17■□□□□ 0.66
SUDS3-204ENST00000543473 FAM105AQ9NUU6 356 aa19.17■□□□□ 0.66
SUDS3-204ENST00000543473 SLC9A8Q9Y2E8 581 aa19.17■□□□□ 0.66
SUDS3-204ENST00000543473 CARD8Q9Y2G2 431 aa19.17■□□□□ 0.66
SUDS3-204ENST00000543473 CICQ96RK0 1608 aaPredicted RBP19.16■□□□□ 0.66
SUDS3-204ENST00000543473 COL1A2P08123 1366 aa19.16■□□□□ 0.66
SUDS3-204ENST00000543473 hCG_2039718K7EN88 272 aa19.16■□□□□ 0.66
SUDS3-204ENST00000543473 TREHO43280 583 aa19.16■□□□□ 0.66
SUDS3-204ENST00000543473 MADCAM1Q13477 382 aa19.16■□□□□ 0.66
SUDS3-204ENST00000543473 SYT16Q17RD7 645 aa19.16■□□□□ 0.66
SUDS3-204ENST00000543473 SLC13A3Q8WWT9 602 aa19.16■□□□□ 0.66
SUDS3-204ENST00000543473 TMBIM1Q969X1 311 aa19.16■□□□□ 0.66
SUDS3-204ENST00000543473 SEMA3DO95025 777 aa19.16■□□□□ 0.66
SUDS3-204ENST00000543473 STYXQ8WUJ0 223 aa19.16■□□□□ 0.66
SUDS3-204ENST00000543473 GATA6Q92908 595 aa19.16■□□□□ 0.66
SUDS3-204ENST00000543473 UTP4Q969X6 686 aaKnown RBP19.16■□□□□ 0.66
SUDS3-204ENST00000543473 RPS6KB2Q9UBS0 482 aa19.16■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms