RNA–Protein interactions for RNA: ENST00000541819.6

GABRB3-204, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 1 (best) BASIC

Gene GABRB3, Length 5,934 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-204ENST00000541819 IFT80Q9P2H3 777 aaPredicted RBP10.65□□□□□ -0.7
GABRB3-204ENST00000541819 RAI2Q9Y5P3 530 aa10.65□□□□□ -0.7
GABRB3-204ENST00000541819 CNTNAP1P78357 1384 aa10.65□□□□□ -0.7
GABRB3-204ENST00000541819 ATP6AP2A0A1C7CYW4 349 aa10.65□□□□□ -0.71
GABRB3-204ENST00000541819 NCANO14594 1321 aa10.65□□□□□ -0.71
GABRB3-204ENST00000541819 ATP6AP2O75787 350 aa10.65□□□□□ -0.71
GABRB3-204ENST00000541819 PGRP06401 933 aa10.65□□□□□ -0.71
GABRB3-204ENST00000541819 ANXA4P09525 319 aaPredicted RBP10.65□□□□□ -0.71
GABRB3-204ENST00000541819 PKMP14618 531 aaKnown RBP10.65□□□□□ -0.71
GABRB3-204ENST00000541819 AHCYP23526 432 aa10.65□□□□□ -0.71
GABRB3-204ENST00000541819 PSMA1P25786 263 aaKnown RBP10.65□□□□□ -0.71
GABRB3-204ENST00000541819 ARCN1P48444 511 aaKnown RBP10.65□□□□□ -0.71
GABRB3-204ENST00000541819 PITPNAQ00169 270 aa10.65□□□□□ -0.71
GABRB3-204ENST00000541819 PUM1Q14671 1186 aaKnown RBP eCLIP10.65□□□□□ -0.71
GABRB3-204ENST00000541819 CAMSAP1Q5T5Y3 1602 aa10.65□□□□□ -0.71
GABRB3-204ENST00000541819 SLC8B1Q6J4K2 584 aa10.65□□□□□ -0.71
GABRB3-204ENST00000541819 TCF7L1Q9HCS4 588 aa10.65□□□□□ -0.71
GABRB3-204ENST00000541819 SERINC1Q9NRX5 453 aa10.65□□□□□ -0.71
GABRB3-204ENST00000541819 ZNF221Q9UK13 617 aa10.65□□□□□ -0.71
GABRB3-204ENST00000541819 PCDHB11Q9Y5F2 797 aa10.65□□□□□ -0.71
GABRB3-204ENST00000541819 FKBP7Q9Y680 259 aa10.65□□□□□ -0.71
GABRB3-204ENST00000541819 COMMD3-BMI1R4GMX3 469 aa10.65□□□□□ -0.71
GABRB3-204ENST00000541819 U3KQV3 271 aa10.65□□□□□ -0.71
GABRB3-204ENST00000541819 hCG_1818297A0A087WSY0 165 aa10.64□□□□□ -0.71
GABRB3-204ENST00000541819 CPSF4LA6NMK7 179 aaKnown RBP10.64□□□□□ -0.71
GABRB3-204ENST00000541819 CAPN14A8MX76 684 aa10.64□□□□□ -0.71
GABRB3-204ENST00000541819 BANF1O75531 89 aa10.64□□□□□ -0.71
GABRB3-204ENST00000541819 BLKP51451 505 aa10.64□□□□□ -0.71
GABRB3-204ENST00000541819 COLEC12Q5KU26 742 aa10.64□□□□□ -0.71
GABRB3-204ENST00000541819 TMEM164Q5U3C3 297 aa10.64□□□□□ -0.71
GABRB3-204ENST00000541819 AAGABQ6PD74 315 aa10.64□□□□□ -0.71
GABRB3-204ENST00000541819 TNS4Q8IZW8 715 aa10.64□□□□□ -0.71
GABRB3-204ENST00000541819 CRYBG2Q8N1P7 616 aa10.64□□□□□ -0.71
GABRB3-204ENST00000541819 SLC22A17Q8WUG5 538 aa10.64□□□□□ -0.71
GABRB3-204ENST00000541819 NPAS2Q99743 824 aa10.64□□□□□ -0.71
GABRB3-204ENST00000541819 PCYOX1Q9UHG3 505 aa10.64□□□□□ -0.71
GABRB3-204ENST00000541819 EVLQ9UI08 416 aaPredicted RBP10.64□□□□□ -0.71
GABRB3-204ENST00000541819 AP4B1Q9Y6B7 739 aa10.64□□□□□ -0.71
GABRB3-204ENST00000541819 RNF17Q9BXT8 1623 aaKnown RBP10.64□□□□□ -0.71
GABRB3-204ENST00000541819 CEMIPQ8WUJ3 1361 aa10.64□□□□□ -0.71
GABRB3-204ENST00000541819 H0YGN5 161 aa10.64□□□□□ -0.71
GABRB3-204ENST00000541819 UNC5CO95185 931 aa10.64□□□□□ -0.71
GABRB3-204ENST00000541819 STBD1O95210 358 aa10.64□□□□□ -0.71
GABRB3-204ENST00000541819 BPNT1O95861 308 aa10.64□□□□□ -0.71
GABRB3-204ENST00000541819 ADRB2P07550 413 aa10.64□□□□□ -0.71
GABRB3-204ENST00000541819 KCNJ5P48544 419 aa10.64□□□□□ -0.71
GABRB3-204ENST00000541819 POU5F1Q01860 360 aaKnown RBP10.64□□□□□ -0.71
GABRB3-204ENST00000541819 DUSP4Q13115 394 aa10.64□□□□□ -0.71
GABRB3-204ENST00000541819 NAE1Q13564 534 aa10.64□□□□□ -0.71
GABRB3-204ENST00000541819 PDK4Q16654 411 aa10.64□□□□□ -0.71
GABRB3-204ENST00000541819 AADACL2Q6P093 401 aa10.64□□□□□ -0.71
GABRB3-204ENST00000541819 CFAP206Q8IYR0 622 aa10.64□□□□□ -0.71
GABRB3-204ENST00000541819 SAMD14Q8IZD0 417 aaPredicted RBP10.64□□□□□ -0.71
GABRB3-204ENST00000541819 HDDC3Q8N4P3 179 aa10.64□□□□□ -0.71
GABRB3-204ENST00000541819 COX18Q8N8Q8 333 aa10.64□□□□□ -0.71
GABRB3-204ENST00000541819 SPERTQ8NA61 448 aa10.64□□□□□ -0.71
GABRB3-204ENST00000541819 ZSWIM3Q96MP5 696 aa10.64□□□□□ -0.71
GABRB3-204ENST00000541819 CASZ1Q86V15 1759 aa10.64□□□□□ -0.71
GABRB3-204ENST00000541819 ZNF726A6NNF4 738 aa10.64□□□□□ -0.71
GABRB3-204ENST00000541819 SLC33A1O00400 549 aaPredicted RBP10.64□□□□□ -0.71
GABRB3-204ENST00000541819 PDPK1O15530 556 aa10.64□□□□□ -0.71
GABRB3-204ENST00000541819 C1RP00736 705 aa10.64□□□□□ -0.71
GABRB3-204ENST00000541819 GRK5P34947 590 aa10.64□□□□□ -0.71
GABRB3-204ENST00000541819 RPIAP49247 311 aa10.64□□□□□ -0.71
GABRB3-204ENST00000541819 XIAPP98170 497 aa10.64□□□□□ -0.71
GABRB3-204ENST00000541819 GTF2BQ00403 316 aa10.64□□□□□ -0.71
GABRB3-204ENST00000541819 MTX3Q5HYI7 312 aa10.64□□□□□ -0.71
GABRB3-204ENST00000541819 UTS2BQ765I0 119 aa10.64□□□□□ -0.71
GABRB3-204ENST00000541819 TMEM145Q8NBT3 493 aa10.64□□□□□ -0.71
GABRB3-204ENST00000541819 OR2L8Q8NGY9 312 aa10.64□□□□□ -0.71
GABRB3-204ENST00000541819 SLC39A3Q9BRY0 314 aa10.64□□□□□ -0.71
GABRB3-204ENST00000541819 WRAP53Q9BUR4 548 aaKnown RBP10.64□□□□□ -0.71
GABRB3-204ENST00000541819 TTYH1Q9H313 450 aaPredicted RBP10.64□□□□□ -0.71
GABRB3-204ENST00000541819 BAIAP2Q9UQB8 552 aa10.64□□□□□ -0.71
GABRB3-204ENST00000541819 COL1A2P08123 1366 aa10.64□□□□□ -0.71
GABRB3-204ENST00000541819 NUAK1O60285 661 aa10.64□□□□□ -0.71
GABRB3-204ENST00000541819 SELPP16109 830 aa10.64□□□□□ -0.71
GABRB3-204ENST00000541819 AGXTP21549 392 aa10.64□□□□□ -0.71
GABRB3-204ENST00000541819 TNFSF9P41273 254 aa10.64□□□□□ -0.71
GABRB3-204ENST00000541819 OR3A3P47888 321 aa10.64□□□□□ -0.71
GABRB3-204ENST00000541819 OR3A2P47893 321 aa10.64□□□□□ -0.71
GABRB3-204ENST00000541819 PGDP52209 483 aa10.64□□□□□ -0.71
GABRB3-204ENST00000541819 CAPZA1P52907 286 aa10.64□□□□□ -0.71
GABRB3-204ENST00000541819 HSPB3Q12988 150 aa10.64□□□□□ -0.71
GABRB3-204ENST00000541819 ZFP69Q49AA0 526 aa10.64□□□□□ -0.71
GABRB3-204ENST00000541819 CHERPQ8IWX8 916 aaKnown RBP10.64□□□□□ -0.71
GABRB3-204ENST00000541819 PNLDC1Q8NA58 520 aaKnown RBP10.64□□□□□ -0.71
GABRB3-204ENST00000541819 NXPE2Q96DL1 559 aa10.64□□□□□ -0.71
GABRB3-204ENST00000541819 TLR10Q9BXR5 811 aa10.64□□□□□ -0.71
GABRB3-204ENST00000541819 PNPLA8Q9NP80 782 aa10.64□□□□□ -0.71
GABRB3-204ENST00000541819 SPEF1Q9Y4P9 236 aa10.64□□□□□ -0.71
GABRB3-204ENST00000541819 GRXCR2A6NFK2 248 aa10.63□□□□□ -0.71
GABRB3-204ENST00000541819 TISP43B9A030 160 aa10.63□□□□□ -0.71
GABRB3-204ENST00000541819 PITPNM1O00562 1244 aa10.63□□□□□ -0.71
GABRB3-204ENST00000541819 NRP2O60462 931 aa10.63□□□□□ -0.71
GABRB3-204ENST00000541819 TGDSO95455 350 aa10.63□□□□□ -0.71
GABRB3-204ENST00000541819 ITIH1P19827 911 aa10.63□□□□□ -0.71
GABRB3-204ENST00000541819 RYKP34925 604 aa10.63□□□□□ -0.71
GABRB3-204ENST00000541819 BRCC3P46736 316 aa10.63□□□□□ -0.71
GABRB3-204ENST00000541819 PTDSS1P48651 473 aaKnown RBP10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms