RNA–Protein interactions for RNA: ENST00000537981.5

RTN3-208, Transcript of reticulon 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTN3, Length 2,532 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-208ENST00000537981 DEDD2Q8WXF8 326 aa10.59□□□□□ -0.71
RTN3-208ENST00000537981 RORBQ92753 470 aa10.59□□□□□ -0.71
RTN3-208ENST00000537981 CDKL2Q92772 493 aa10.59□□□□□ -0.71
RTN3-208ENST00000537981 RTP4Q96DX8 246 aa10.59□□□□□ -0.71
RTN3-208ENST00000537981 MSANTD3Q96H12 275 aa10.59□□□□□ -0.71
RTN3-208ENST00000537981 TMEM80Q96HE8 168 aa10.59□□□□□ -0.71
RTN3-208ENST00000537981 UBXN10Q96LJ8 280 aa10.59□□□□□ -0.71
RTN3-208ENST00000537981 UQCC2Q9BRT2 126 aa10.59□□□□□ -0.71
RTN3-208ENST00000537981 TRAF4Q9BUZ4 470 aaPredicted RBP10.59□□□□□ -0.71
RTN3-208ENST00000537981 FRMD8P1Q9BZ68 369 aaPredicted RBP10.59□□□□□ -0.71
RTN3-208ENST00000537981 KCNN2Q9H2S1 579 aa10.59□□□□□ -0.71
RTN3-208ENST00000537981 ERVMER34-1Q9H9K5 563 aa10.59□□□□□ -0.71
RTN3-208ENST00000537981 GLTPQ9NZD2 209 aa10.59□□□□□ -0.71
RTN3-208ENST00000537981 TLK1Q9UKI8 766 aa10.59□□□□□ -0.71
RTN3-208ENST00000537981 TYW5A2RUC4 315 aaKnown RBP10.59□□□□□ -0.71
RTN3-208ENST00000537981 EFCAB9A8MZ26 197 aa10.59□□□□□ -0.71
RTN3-208ENST00000537981 FAM25AB3EWG3 89 aa10.59□□□□□ -0.71
RTN3-208ENST00000537981 FAM25CB3EWG5 89 aa10.59□□□□□ -0.71
RTN3-208ENST00000537981 FAM25GB3EWG6 89 aa10.59□□□□□ -0.71
RTN3-208ENST00000537981 AREL1O15033 823 aa10.59□□□□□ -0.71
RTN3-208ENST00000537981 MT-ND2P03891 347 aa10.59□□□□□ -0.71
RTN3-208ENST00000537981 KRT19P08727 400 aa10.59□□□□□ -0.71
RTN3-208ENST00000537981 MMP10P09238 476 aa10.59□□□□□ -0.71
RTN3-208ENST00000537981 MSH3P20585 1137 aa10.59□□□□□ -0.71
RTN3-208ENST00000537981 HRH2P25021 359 aa10.59□□□□□ -0.71
RTN3-208ENST00000537981 DNAJB1P25685 340 aa10.59□□□□□ -0.71
RTN3-208ENST00000537981 GSK3BP49841 420 aa10.59□□□□□ -0.71
RTN3-208ENST00000537981 ALDH3A2P51648 485 aa10.59□□□□□ -0.71
RTN3-208ENST00000537981 SLC12A2P55011 1212 aa10.59□□□□□ -0.71
RTN3-208ENST00000537981 ISL1P61371 349 aa10.59□□□□□ -0.71
RTN3-208ENST00000537981 RPS8P62241 208 aaKnown RBP10.59□□□□□ -0.71
RTN3-208ENST00000537981 UBE3AQ05086 875 aa10.59□□□□□ -0.71
RTN3-208ENST00000537981 GALNT3Q14435 633 aa10.59□□□□□ -0.71
RTN3-208ENST00000537981 DENND5AQ6IQ26 1287 aa10.59□□□□□ -0.71
RTN3-208ENST00000537981 STYK1Q6J9G0 422 aa10.59□□□□□ -0.71
RTN3-208ENST00000537981 SCYL2Q6P3W7 929 aa10.59□□□□□ -0.71
RTN3-208ENST00000537981 ERO1BQ86YB8 467 aa10.59□□□□□ -0.71
RTN3-208ENST00000537981 TMEM151BQ8IW70 566 aa10.59□□□□□ -0.71
RTN3-208ENST00000537981 CENPLQ8N0S6 344 aaPredicted RBP10.59□□□□□ -0.71
RTN3-208ENST00000537981 GALNT11Q8NCW6 608 aa10.59□□□□□ -0.71
RTN3-208ENST00000537981 TMEM174Q8WUU8 243 aa10.59□□□□□ -0.71
RTN3-208ENST00000537981 RIPOR3Q96MK2 946 aa10.59□□□□□ -0.71
RTN3-208ENST00000537981 CDADC1Q9BWV3 514 aa10.59□□□□□ -0.71
RTN3-208ENST00000537981 AMNQ9BXJ7 453 aa10.59□□□□□ -0.71
RTN3-208ENST00000537981 IL22Q9GZX6 179 aa10.59□□□□□ -0.71
RTN3-208ENST00000537981 SCPEP1Q9HB40 452 aa10.59□□□□□ -0.71
RTN3-208ENST00000537981 ABCD2Q9UBJ2 740 aa10.59□□□□□ -0.71
RTN3-208ENST00000537981 RUVBL2Q9Y230 463 aaKnown RBP10.59□□□□□ -0.71
RTN3-208ENST00000537981 GIMAP1-GIMAP5A0A087WTJ2 511 aa10.58□□□□□ -0.72
RTN3-208ENST00000537981 H3BMM5 538 aa10.58□□□□□ -0.72
RTN3-208ENST00000537981 I3L521 148 aa10.58□□□□□ -0.72
RTN3-208ENST00000537981 NFIBO00712 420 aa10.58□□□□□ -0.72
RTN3-208ENST00000537981 PRMT5O14744 637 aaPredicted RBP10.58□□□□□ -0.72
RTN3-208ENST00000537981 TREHO43280 583 aa10.58□□□□□ -0.72
RTN3-208ENST00000537981 TSC22D2O75157 780 aa10.58□□□□□ -0.72
RTN3-208ENST00000537981 F2P00734 622 aa10.58□□□□□ -0.72
RTN3-208ENST00000537981 PDGFAP04085 211 aa10.58□□□□□ -0.72
RTN3-208ENST00000537981 YES1P07947 543 aa10.58□□□□□ -0.72
RTN3-208ENST00000537981 CTSHP09668 335 aa10.58□□□□□ -0.72
RTN3-208ENST00000537981 TBXAS1P24557 533 aaPredicted RBP10.58□□□□□ -0.72
RTN3-208ENST00000537981 AZGP1P25311 298 aaKnown RBP10.58□□□□□ -0.72
RTN3-208ENST00000537981 LIPAP38571 399 aa10.58□□□□□ -0.72
RTN3-208ENST00000537981 RAP1GAPP47736 663 aa10.58□□□□□ -0.72
RTN3-208ENST00000537981 CLCN7P51798 805 aa10.58□□□□□ -0.72
RTN3-208ENST00000537981 LIMK2P53671 638 aa10.58□□□□□ -0.72
RTN3-208ENST00000537981 DAG1Q14118 895 aa10.58□□□□□ -0.72
RTN3-208ENST00000537981 SQLEQ14534 574 aa10.58□□□□□ -0.72
RTN3-208ENST00000537981 TAB1Q15750 504 aa10.58□□□□□ -0.72
RTN3-208ENST00000537981 OCLNQ16625 522 aa10.58□□□□□ -0.72
RTN3-208ENST00000537981 TYSND1Q2T9J0 566 aa10.58□□□□□ -0.72
RTN3-208ENST00000537981 ANKS3Q6ZW76 656 aa10.58□□□□□ -0.72
RTN3-208ENST00000537981 CLYBLQ8N0X4 340 aa10.58□□□□□ -0.72
RTN3-208ENST00000537981 ZBTB44Q8NCP5 570 aa10.58□□□□□ -0.72
RTN3-208ENST00000537981 ZMIZ2Q8NF64 920 aa10.58□□□□□ -0.72
RTN3-208ENST00000537981 NUDT8Q8WV74 236 aa10.58□□□□□ -0.72
RTN3-208ENST00000537981 IPCEF1Q8WWN9 437 aaPredicted RBP10.58□□□□□ -0.72
RTN3-208ENST00000537981 GIMAP5Q96F15 307 aa10.58□□□□□ -0.72
RTN3-208ENST00000537981 MRPL40Q9NQ50 206 aaKnown RBP10.58□□□□□ -0.72
RTN3-208ENST00000537981 NPDC1Q9NQX5 325 aaPredicted RBP10.58□□□□□ -0.72
RTN3-208ENST00000537981 EIF3KQ9UBQ5 218 aaKnown RBP10.58□□□□□ -0.72
RTN3-208ENST00000537981 NAALAD2Q9Y3Q0 740 aa10.58□□□□□ -0.72
RTN3-208ENST00000537981 PRR23AA6NEV1 266 aa10.58□□□□□ -0.72
RTN3-208ENST00000537981 TLL1O43897 1013 aa10.58□□□□□ -0.72
RTN3-208ENST00000537981 MITFO75030 526 aaPredicted RBP10.58□□□□□ -0.72
RTN3-208ENST00000537981 BMP1P13497 986 aa10.58□□□□□ -0.72
RTN3-208ENST00000537981 CYP4B1P13584 511 aa10.58□□□□□ -0.72
RTN3-208ENST00000537981 CD36P16671 472 aa10.58□□□□□ -0.72
RTN3-208ENST00000537981 MAPK12P53778 367 aa10.58□□□□□ -0.72
RTN3-208ENST00000537981 SQSTM1Q13501 440 aa10.58□□□□□ -0.72
RTN3-208ENST00000537981 TP53BP2Q13625 1128 aa10.58□□□□□ -0.72
RTN3-208ENST00000537981 NFIXQ14938 502 aa10.58□□□□□ -0.72
RTN3-208ENST00000537981 MFSD13AQ14CX5 517 aa10.58□□□□□ -0.72
RTN3-208ENST00000537981 BTBD16Q32M84 506 aa10.58□□□□□ -0.72
RTN3-208ENST00000537981 GPAT3Q53EU6 434 aa10.58□□□□□ -0.72
RTN3-208ENST00000537981 IRAK1BP1Q5VVH5 260 aa10.58□□□□□ -0.72
RTN3-208ENST00000537981 LAMTOR1Q6IAA8 161 aa10.58□□□□□ -0.72
RTN3-208ENST00000537981 PNCKQ6P2M8 343 aa10.58□□□□□ -0.72
RTN3-208ENST00000537981 B3GNT9Q6UX72 402 aa10.58□□□□□ -0.72
RTN3-208ENST00000537981 PLEKHM3Q6ZWE6 761 aa10.58□□□□□ -0.72
RTN3-208ENST00000537981 TMEM179BQ7Z7N9 219 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms