RNA–Protein interactions for RNA: ENST00000532088.1

COPB1-208, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 3

Gene COPB1, Length 510 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-208ENST00000532088 WDR92Q96MX6 357 aa12.36□□□□□ -0.43
COPB1-208ENST00000532088 CPNE1Q99829 537 aa12.36□□□□□ -0.43
COPB1-208ENST00000532088 MYOCQ99972 504 aa12.36□□□□□ -0.43
COPB1-208ENST00000532088 MIR1-1HGQ9H1L0 117 aa12.36□□□□□ -0.43
COPB1-208ENST00000532088 EPB41L4BQ9H329 900 aa12.36□□□□□ -0.43
COPB1-208ENST00000532088 ERVMER34-1Q9H9K5 563 aa12.36□□□□□ -0.43
COPB1-208ENST00000532088 PPANQ9NQ55 473 aaKnown RBP12.36□□□□□ -0.43
COPB1-208ENST00000532088 IARS2Q9NSE4 1012 aaKnown RBP12.36□□□□□ -0.43
COPB1-208ENST00000532088 MARCH4Q9P2E8 410 aaPredicted RBP12.36□□□□□ -0.43
COPB1-208ENST00000532088 GMPR2Q9P2T1 348 aaKnown RBP12.36□□□□□ -0.43
COPB1-208ENST00000532088 GPR34Q9UPC5 381 aa12.36□□□□□ -0.43
COPB1-208ENST00000532088 SMG5Q9UPR3 1016 aaKnown RBP12.36□□□□□ -0.43
COPB1-208ENST00000532088 FNDC3AQ9Y2H6 1198 aaKnown RBP12.36□□□□□ -0.43
COPB1-208ENST00000532088 OR1A2Q9Y585 309 aa12.36□□□□□ -0.43
COPB1-208ENST00000532088 PCDHB1Q9Y5F3 818 aa12.36□□□□□ -0.43
COPB1-208ENST00000532088 COMMD10Q9Y6G5 202 aa12.36□□□□□ -0.43
COPB1-208ENST00000532088 DNMT3AQ9Y6K1 912 aaPredicted RBP12.36□□□□□ -0.43
COPB1-208ENST00000532088 R4GN57 208 aa12.36□□□□□ -0.43
COPB1-208ENST00000532088 SPAG17Q6Q759 2223 aa12.35□□□□□ -0.43
COPB1-208ENST00000532088 PLXNB3Q9ULL4 1909 aa12.35□□□□□ -0.43
COPB1-208ENST00000532088 TLR4O00206 839 aa12.35□□□□□ -0.43
COPB1-208ENST00000532088 PRMT5O14744 637 aaPredicted RBP12.35□□□□□ -0.43
COPB1-208ENST00000532088 CHUKO15111 745 aa12.35□□□□□ -0.43
COPB1-208ENST00000532088 INPP4BO15327 924 aa12.35□□□□□ -0.43
COPB1-208ENST00000532088 KCNJ13O60928 360 aa12.35□□□□□ -0.43
COPB1-208ENST00000532088 NDUFS3O75489 264 aa12.35□□□□□ -0.43
COPB1-208ENST00000532088 ESR1P03372 595 aa12.35□□□□□ -0.43
COPB1-208ENST00000532088 WNT1P04628 370 aa12.35□□□□□ -0.43
COPB1-208ENST00000532088 ATP1B2P14415 290 aaPredicted RBP12.35□□□□□ -0.43
COPB1-208ENST00000532088 MSH3P20585 1137 aa12.35□□□□□ -0.43
COPB1-208ENST00000532088 MAOBP27338 520 aa12.35□□□□□ -0.43
COPB1-208ENST00000532088 CDKN1CP49918 316 aaPredicted RBP12.35□□□□□ -0.43
COPB1-208ENST00000532088 NXPH1P58417 271 aa12.35□□□□□ -0.43
COPB1-208ENST00000532088 TMEM115Q12893 351 aaPredicted RBP12.35□□□□□ -0.43
COPB1-208ENST00000532088 GTF2H3Q13889 308 aa12.35□□□□□ -0.43
COPB1-208ENST00000532088 PDE1CQ14123 709 aaPredicted RBP12.35□□□□□ -0.43
COPB1-208ENST00000532088 SLC29A2Q14542 456 aa12.35□□□□□ -0.43
COPB1-208ENST00000532088 RASA2Q15283 850 aa12.35□□□□□ -0.43
COPB1-208ENST00000532088 KBTBD12Q3ZCT8 623 aa12.35□□□□□ -0.43
COPB1-208ENST00000532088 BCL7AQ4VC05 210 aa12.35□□□□□ -0.43
COPB1-208ENST00000532088 SLC23A3Q6PIS1 610 aa12.35□□□□□ -0.43
COPB1-208ENST00000532088 CAPN12Q6ZSI9 719 aa12.35□□□□□ -0.43
COPB1-208ENST00000532088 PARGQ86W56 976 aa12.35□□□□□ -0.43
COPB1-208ENST00000532088 UNC5BQ8IZJ1 945 aa12.35□□□□□ -0.43
COPB1-208ENST00000532088 SLC22A18ASQ8N1D0 253 aa12.35□□□□□ -0.43
COPB1-208ENST00000532088 OTUD6BQ8N6M0 293 aa12.35□□□□□ -0.43
COPB1-208ENST00000532088 GDAP1Q8TB36 358 aa12.35□□□□□ -0.43
COPB1-208ENST00000532088 LPGAT1Q92604 370 aa12.35□□□□□ -0.43
COPB1-208ENST00000532088 LINC00615Q96LM1 132 aaPredicted RBP12.35□□□□□ -0.43
COPB1-208ENST00000532088 CCDC77Q9BR77 488 aa12.35□□□□□ -0.43
COPB1-208ENST00000532088 MCMBPQ9BTE3 642 aa12.35□□□□□ -0.43
COPB1-208ENST00000532088 LGR4Q9BXB1 951 aa12.35□□□□□ -0.43
COPB1-208ENST00000532088 ZDHHC5Q9C0B5 715 aa12.35□□□□□ -0.43
COPB1-208ENST00000532088 FAM96AQ9H5X1 160 aa12.35□□□□□ -0.43
COPB1-208ENST00000532088 ZNF358Q9NW07 568 aa12.35□□□□□ -0.43
COPB1-208ENST00000532088 IL1RAPL1Q9NZN1 696 aa12.35□□□□□ -0.43
COPB1-208ENST00000532088 CA5BQ9Y2D0 317 aa12.35□□□□□ -0.43
COPB1-208ENST00000532088 DGKBQ9Y6T7 804 aa12.35□□□□□ -0.43
COPB1-208ENST00000532088 DOCK9Q9BZ29 2069 aa12.34□□□□□ -0.43
COPB1-208ENST00000532088 TTLL8A6PVC2 850 aa12.34□□□□□ -0.43
COPB1-208ENST00000532088 GOLGA8KD6RF30 607 aa12.34□□□□□ -0.43
COPB1-208ENST00000532088 GOLGA8TH3BQL2 631 aa12.34□□□□□ -0.43
COPB1-208ENST00000532088 GPR39O43194 453 aa12.34□□□□□ -0.43
COPB1-208ENST00000532088 NUAK1O60285 661 aa12.34□□□□□ -0.43
COPB1-208ENST00000532088 TCEA3O75764 348 aa12.34□□□□□ -0.43
COPB1-208ENST00000532088 CDK14O94921 469 aa12.34□□□□□ -0.43
COPB1-208ENST00000532088 CEACAM5P06731 702 aa12.34□□□□□ -0.43
COPB1-208ENST00000532088 RETP07949 1114 aa12.34□□□□□ -0.43
COPB1-208ENST00000532088 PRSS56P0CW18 603 aa12.34□□□□□ -0.43
COPB1-208ENST00000532088 H2AFXP16104 143 aaPredicted RBP12.34□□□□□ -0.43
COPB1-208ENST00000532088 CD9P21926 228 aa12.34□□□□□ -0.43
COPB1-208ENST00000532088 AKT1P31749 480 aa12.34□□□□□ -0.43
COPB1-208ENST00000532088 CA5AP35218 305 aa12.34□□□□□ -0.43
COPB1-208ENST00000532088 HSD17B3P37058 310 aa12.34□□□□□ -0.43
COPB1-208ENST00000532088 GP5P40197 560 aa12.34□□□□□ -0.43
COPB1-208ENST00000532088 BLKP51451 505 aa12.34□□□□□ -0.43
COPB1-208ENST00000532088 C21orf59P57076 290 aa12.34□□□□□ -0.43
COPB1-208ENST00000532088 B4GALNT1Q00973 533 aa12.34□□□□□ -0.43
COPB1-208ENST00000532088 UAP1Q16222 522 aaPredicted RBP12.34□□□□□ -0.43
COPB1-208ENST00000532088 BEND6Q5SZJ8 279 aaPredicted RBP12.34□□□□□ -0.43
COPB1-208ENST00000532088 GRTP1Q5TC63 336 aa12.34□□□□□ -0.43
COPB1-208ENST00000532088 DENND6AQ8IWF6 608 aa12.34□□□□□ -0.43
COPB1-208ENST00000532088 SUMF1Q8NBK3 374 aa12.34□□□□□ -0.43
COPB1-208ENST00000532088 UBLCP1Q8WVY7 318 aaPredicted RBP12.34□□□□□ -0.43
COPB1-208ENST00000532088 SLC44A1Q8WWI5 657 aa12.34□□□□□ -0.43
COPB1-208ENST00000532088 PIGKQ92643 395 aa12.34□□□□□ -0.43
COPB1-208ENST00000532088 ATOH1Q92858 354 aaPredicted RBP12.34□□□□□ -0.43
COPB1-208ENST00000532088 TSSK1BQ9BXA7 367 aa12.34□□□□□ -0.43
COPB1-208ENST00000532088 CLPBQ9H078 707 aa12.34□□□□□ -0.43
COPB1-208ENST00000532088 P2RY12Q9H244 342 aa12.34□□□□□ -0.43
COPB1-208ENST00000532088 SMYD2Q9NRG4 433 aa12.34□□□□□ -0.43
COPB1-208ENST00000532088 TMEM74BQ9NUR3 256 aa12.34□□□□□ -0.43
COPB1-208ENST00000532088 TXNDC16Q9P2K2 825 aa12.34□□□□□ -0.43
COPB1-208ENST00000532088 ATXN10Q9UBB4 475 aa12.34□□□□□ -0.43
COPB1-208ENST00000532088 SLC24A2Q9UI40 661 aa12.34□□□□□ -0.43
COPB1-208ENST00000532088 GNPTGQ9UJJ9 305 aa12.34□□□□□ -0.43
COPB1-208ENST00000532088 ZNF180Q9UJW8 692 aa12.34□□□□□ -0.43
COPB1-208ENST00000532088 HCN4Q9Y3Q4 1203 aa12.34□□□□□ -0.43
COPB1-208ENST00000532088 OAS3Q9Y6K5 1087 aaKnown RBP12.34□□□□□ -0.43
COPB1-208ENST00000532088 SLCO1B1Q9Y6L6 691 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms