RNA–Protein interactions for RNA: ENST00000528336.1

PCF11-202, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 5

Gene PCF11, Length 1,041 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-202ENST00000528336 HNRNPCL1O60812 293 aaKnown RBP5.78□□□□□ -1.48
PCF11-202ENST00000528336 FGF3P11487 239 aaPredicted RBP5.78□□□□□ -1.48
PCF11-202ENST00000528336 ZNF182P17025 639 aaPredicted RBP5.78□□□□□ -1.48
PCF11-202ENST00000528336 ITGB6P18564 788 aa5.78□□□□□ -1.48
PCF11-202ENST00000528336 MAOAP21397 527 aa5.78□□□□□ -1.48
PCF11-202ENST00000528336 BSGP35613 385 aa5.78□□□□□ -1.48
PCF11-202ENST00000528336 MSH2P43246 934 aa5.78□□□□□ -1.48
PCF11-202ENST00000528336 EVCP57679 992 aa5.78□□□□□ -1.48
PCF11-202ENST00000528336 GOLGA8DPQ0D2H9 430 aa5.78□□□□□ -1.48
PCF11-202ENST00000528336 TFCP2Q12800 502 aa5.78□□□□□ -1.48
PCF11-202ENST00000528336 WTAPQ15007 396 aa5.78□□□□□ -1.48
PCF11-202ENST00000528336 CTF1Q16619 201 aa5.78□□□□□ -1.48
PCF11-202ENST00000528336 ODF2Q5BJF6 829 aa5.78□□□□□ -1.48
PCF11-202ENST00000528336 CXorf66Q5JRM2 361 aaPredicted RBP5.78□□□□□ -1.48
PCF11-202ENST00000528336 C6orf141Q5SZD1 244 aa5.78□□□□□ -1.48
PCF11-202ENST00000528336 GGNBP1Q5YKI7 109 aa5.78□□□□□ -1.48
PCF11-202ENST00000528336 CAPRIN2Q6IMN6 1127 aaKnown RBP5.78□□□□□ -1.48
PCF11-202ENST00000528336 PLEKHA7Q6IQ23 1121 aa5.78□□□□□ -1.48
PCF11-202ENST00000528336 NAA16Q6N069 864 aaPredicted RBP5.78□□□□□ -1.48
PCF11-202ENST00000528336 TTI2Q6NXR4 508 aa5.78□□□□□ -1.48
PCF11-202ENST00000528336 ALKBH5Q6P6C2 394 aaKnown RBP5.78□□□□□ -1.48
PCF11-202ENST00000528336 CRELD2Q6UXH1 353 aaPredicted RBP5.78□□□□□ -1.48
PCF11-202ENST00000528336 PQLC2Q6ZP29 291 aa5.78□□□□□ -1.48
PCF11-202ENST00000528336 C16orf82Q7Z2V1 217 aa5.78□□□□□ -1.48
PCF11-202ENST00000528336 DNAJB7Q7Z6W7 309 aaPredicted RBP5.78□□□□□ -1.48
PCF11-202ENST00000528336 FOXRED2Q8IWF2 684 aa5.78□□□□□ -1.48
PCF11-202ENST00000528336 FRMD1Q8N878 549 aa5.78□□□□□ -1.48
PCF11-202ENST00000528336 SMRP1Q8NCR6 262 aa5.78□□□□□ -1.48
PCF11-202ENST00000528336 OR14L1PQ8NHC6 308 aa5.78□□□□□ -1.48
PCF11-202ENST00000528336 ADGRG7Q96K78 797 aa5.78□□□□□ -1.48
PCF11-202ENST00000528336 STRA6Q9BX79 667 aa5.78□□□□□ -1.48
PCF11-202ENST00000528336 HPF1Q9NWY4 346 aa5.78□□□□□ -1.48
PCF11-202ENST00000528336 GTF3C4Q9UKN8 822 aa5.78□□□□□ -1.48
PCF11-202ENST00000528336 EFCAB6Q5THR3 1501 aa5.78□□□□□ -1.48
PCF11-202ENST00000528336 IQGAP3Q86VI3 1631 aa5.77□□□□□ -1.48
PCF11-202ENST00000528336 RPRD2Q5VT52 1461 aaKnown RBP5.77□□□□□ -1.49
PCF11-202ENST00000528336 hCG_1807616A0A1W2PRN6 198 aa5.77□□□□□ -1.49
PCF11-202ENST00000528336 BTBD18B2RXH4 712 aa5.77□□□□□ -1.49
PCF11-202ENST00000528336 ACOT8O14734 319 aa5.77□□□□□ -1.49
PCF11-202ENST00000528336 ERAL1O75616 437 aaKnown RBP5.77□□□□□ -1.49
PCF11-202ENST00000528336 GAGE7O76087 117 aa5.77□□□□□ -1.49
PCF11-202ENST00000528336 KDM4BO94953 1096 aa5.77□□□□□ -1.49
PCF11-202ENST00000528336 PPP1R3DO95685 299 aa5.77□□□□□ -1.49
PCF11-202ENST00000528336 FTCDO95954 541 aa5.77□□□□□ -1.49
PCF11-202ENST00000528336 QDPRP09417 244 aa5.77□□□□□ -1.49
PCF11-202ENST00000528336 GAGE12FP0CL80 117 aa5.77□□□□□ -1.49
PCF11-202ENST00000528336 GAGE12GP0CL81 117 aa5.77□□□□□ -1.49
PCF11-202ENST00000528336 GAGE12IP0CL82 117 aa5.77□□□□□ -1.49
PCF11-202ENST00000528336 ACADMP11310 421 aa5.77□□□□□ -1.49
PCF11-202ENST00000528336 MAPK4P31152 587 aa5.77□□□□□ -1.49
PCF11-202ENST00000528336 CASQ1P31415 396 aa5.77□□□□□ -1.49
PCF11-202ENST00000528336 CCKBRP32239 447 aa5.77□□□□□ -1.49
PCF11-202ENST00000528336 LIMK1P53667 647 aa5.77□□□□□ -1.49
PCF11-202ENST00000528336 CSE1LP55060 971 aaKnown RBP5.77□□□□□ -1.49
PCF11-202ENST00000528336 DLG1Q12959 904 aa5.77□□□□□ -1.49
PCF11-202ENST00000528336 GAGE1Q13065 139 aa5.77□□□□□ -1.49
PCF11-202ENST00000528336 GAGE4Q13068 117 aa5.77□□□□□ -1.49
PCF11-202ENST00000528336 KIF19Q2TAC6 998 aa5.77□□□□□ -1.49
PCF11-202ENST00000528336 ATP13A5Q4VNC0 1218 aa5.77□□□□□ -1.49
PCF11-202ENST00000528336 GPR139Q6DWJ6 353 aa5.77□□□□□ -1.49
PCF11-202ENST00000528336 SIGIRRQ6IA17 410 aa5.77□□□□□ -1.49
PCF11-202ENST00000528336 DLK2Q6UY11 383 aa5.77□□□□□ -1.49
PCF11-202ENST00000528336 FAM47EQ6ZV65 393 aa5.77□□□□□ -1.49
PCF11-202ENST00000528336 BTN2A1Q7KYR7 527 aa5.77□□□□□ -1.49
PCF11-202ENST00000528336 SLC9B2Q86UD5 537 aa5.77□□□□□ -1.49
PCF11-202ENST00000528336 TMEM68Q96MH6 324 aa5.77□□□□□ -1.49
PCF11-202ENST00000528336 MAP7D2Q96T17 732 aa5.77□□□□□ -1.49
PCF11-202ENST00000528336 SIL1Q9H173 461 aa5.77□□□□□ -1.49
PCF11-202ENST00000528336 RASAL2Q9UJF2 1139 aa5.77□□□□□ -1.49
PCF11-202ENST00000528336 CAMSAP1Q5T5Y3 1602 aa5.77□□□□□ -1.49
PCF11-202ENST00000528336 TET3O43151 1660 aa5.76□□□□□ -1.49
PCF11-202ENST00000528336 C3P01024 1663 aa5.76□□□□□ -1.49
PCF11-202ENST00000528336 A0A1W2PRG0 241 aa5.76□□□□□ -1.49
PCF11-202ENST00000528336 AGAP14A8MT82 685 aa5.76□□□□□ -1.49
PCF11-202ENST00000528336 CCNDBP1O95273 360 aa5.76□□□□□ -1.49
PCF11-202ENST00000528336 SRCP12931 536 aa5.76□□□□□ -1.49
PCF11-202ENST00000528336 BDKRB2P30411 391 aa5.76□□□□□ -1.49
PCF11-202ENST00000528336 DEKP35659 375 aaKnown RBP5.76□□□□□ -1.49
PCF11-202ENST00000528336 RBP5P82980 135 aa5.76□□□□□ -1.49
PCF11-202ENST00000528336 AP1B1Q10567 949 aa5.76□□□□□ -1.49
PCF11-202ENST00000528336 BFSP1Q12934 665 aa5.76□□□□□ -1.49
PCF11-202ENST00000528336 CSTF3Q12996 717 aaKnown RBP5.76□□□□□ -1.49
PCF11-202ENST00000528336 RGMBQ6NW40 437 aa5.76□□□□□ -1.49
PCF11-202ENST00000528336 C11orf88Q6PI97 169 aa5.76□□□□□ -1.49
PCF11-202ENST00000528336 LIN28BQ6ZN17 250 aaKnown RBP eCLIP5.76□□□□□ -1.49
PCF11-202ENST00000528336 PXKQ7Z7A4 578 aa5.76□□□□□ -1.49
PCF11-202ENST00000528336 NEK9Q8TD19 979 aa5.76□□□□□ -1.49
PCF11-202ENST00000528336 ZNF606Q8WXB4 792 aa5.76□□□□□ -1.49
PCF11-202ENST00000528336 IGSF8Q969P0 613 aa5.76□□□□□ -1.49
PCF11-202ENST00000528336 RBM18Q96H35 190 aaKnown RBP5.76□□□□□ -1.49
PCF11-202ENST00000528336 FEM1CQ96JP0 617 aa5.76□□□□□ -1.49
PCF11-202ENST00000528336 PPP1R13BQ96KQ4 1090 aa5.76□□□□□ -1.49
PCF11-202ENST00000528336 HARBI1Q96MB7 349 aa5.76□□□□□ -1.49
PCF11-202ENST00000528336 SH3GL2Q99962 352 aa5.76□□□□□ -1.49
PCF11-202ENST00000528336 PCGF1Q9BSM1 259 aa5.76□□□□□ -1.49
PCF11-202ENST00000528336 C1QTNF4Q9BXJ3 329 aa5.76□□□□□ -1.49
PCF11-202ENST00000528336 GAREM1Q9H706 876 aa5.76□□□□□ -1.49
PCF11-202ENST00000528336 RANGRFQ9HD47 186 aaPredicted RBP5.76□□□□□ -1.49
PCF11-202ENST00000528336 MMP25Q9NPA2 562 aa5.76□□□□□ -1.49
PCF11-202ENST00000528336 EHD2Q9NZN4 543 aa5.76□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms