RNA–Protein interactions for RNA: ENST00000521600.5

PVT1-211, Transcript of Pvt1 oncogene, humanhuman

TSL 2

Gene PVT1, Length 408 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-211ENST00000521600 CATSPERBQ9H7T0 1116 aa3.98□□□□□ -1.77
PVT1-211ENST00000521600 LRRC40Q9H9A6 602 aa3.98□□□□□ -1.77
PVT1-211ENST00000521600 ZNF334Q9HCZ1 680 aaPredicted RBP3.98□□□□□ -1.77
PVT1-211ENST00000521600 TMEM9BQ9NQ34 198 aa3.98□□□□□ -1.77
PVT1-211ENST00000521600 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP3.98□□□□□ -1.77
PVT1-211ENST00000521600 CATSPERZQ9NTU4 200 aa3.98□□□□□ -1.77
PVT1-211ENST00000521600 PIGVQ9NUD9 493 aa3.98□□□□□ -1.77
PVT1-211ENST00000521600 COX16Q9P0S2 106 aa3.98□□□□□ -1.77
PVT1-211ENST00000521600 KLHL8Q9P2G9 620 aaPredicted RBP3.98□□□□□ -1.77
PVT1-211ENST00000521600 SLC17A7Q9P2U7 560 aa3.98□□□□□ -1.77
PVT1-211ENST00000521600 OR12D3Q9UGF7 316 aa3.98□□□□□ -1.77
PVT1-211ENST00000521600 LNPEPQ9UIQ6 1025 aa3.98□□□□□ -1.77
PVT1-211ENST00000521600 MID2Q9UJV3 735 aa3.98□□□□□ -1.77
PVT1-211ENST00000521600 CBLCQ9ULV8 474 aa3.98□□□□□ -1.77
PVT1-211ENST00000521600 COA3Q9Y2R0 106 aaPredicted RBP3.98□□□□□ -1.77
PVT1-211ENST00000521600 AAR2Q9Y312 384 aaKnown RBP3.98□□□□□ -1.77
PVT1-211ENST00000521600 PLLPQ9Y342 182 aa3.98□□□□□ -1.77
PVT1-211ENST00000521600 PIAS3Q9Y6X2 628 aa3.98□□□□□ -1.77
PVT1-211ENST00000521600 ITPR2Q14571 2701 aa3.98□□□□□ -1.77
PVT1-211ENST00000521600 MYOFQ9NZM1 2061 aa3.98□□□□□ -1.77
PVT1-211ENST00000521600 CSMD1Q96PZ7 3565 aa3.97□□□□□ -1.77
PVT1-211ENST00000521600 A0A0G2JND7 137 aa3.97□□□□□ -1.77
PVT1-211ENST00000521600 FAM237BA0A1B0GVD1 139 aa3.97□□□□□ -1.77
PVT1-211ENST00000521600 MYBPHLA2RUH7 354 aa3.97□□□□□ -1.77
PVT1-211ENST00000521600 WDR91A4D1P6 747 aa3.97□□□□□ -1.77
PVT1-211ENST00000521600 ARHGAP42A6NI28 874 aa3.97□□□□□ -1.77
PVT1-211ENST00000521600 CXorf49A8MYA2 514 aaPredicted RBP3.97□□□□□ -1.77
PVT1-211ENST00000521600 HHLA1C9JL84 531 aa3.97□□□□□ -1.77
PVT1-211ENST00000521600 TMEM189-UBE2V1I3L0A0 370 aa3.97□□□□□ -1.77
PVT1-211ENST00000521600 TRAFD1O14545 582 aaPredicted RBP3.97□□□□□ -1.77
PVT1-211ENST00000521600 WNT9AO14904 365 aa3.97□□□□□ -1.77
PVT1-211ENST00000521600 GSTA4O15217 222 aa3.97□□□□□ -1.77
PVT1-211ENST00000521600 ADAM12O43184 909 aa3.97□□□□□ -1.77
PVT1-211ENST00000521600 TIMM44O43615 452 aa3.97□□□□□ -1.77
PVT1-211ENST00000521600 TADA2AO75478 443 aa3.97□□□□□ -1.77
PVT1-211ENST00000521600 RFPL1O75677 317 aa3.97□□□□□ -1.77
PVT1-211ENST00000521600 BEST1O76090 585 aa3.97□□□□□ -1.77
PVT1-211ENST00000521600 HAUS5O94927 633 aa3.97□□□□□ -1.77
PVT1-211ENST00000521600 SNUPNO95149 360 aaKnown RBP3.97□□□□□ -1.77
PVT1-211ENST00000521600 C1RP00736 705 aa3.97□□□□□ -1.77
PVT1-211ENST00000521600 C1QAP02745 245 aa3.97□□□□□ -1.77
PVT1-211ENST00000521600 FYNP06241 537 aa3.97□□□□□ -1.77
PVT1-211ENST00000521600 HNRNPA1P09651 372 aaKnown RBP eCLIP3.97□□□□□ -1.77
PVT1-211ENST00000521600 MSL3P1P0C860 447 aa3.97□□□□□ -1.77
PVT1-211ENST00000521600 CSH1P0DML2 217 aa3.97□□□□□ -1.77
PVT1-211ENST00000521600 CSH2P0DML3 217 aa3.97□□□□□ -1.77
PVT1-211ENST00000521600 COL6A2P12110 1019 aa3.97□□□□□ -1.77
PVT1-211ENST00000521600 PRKCAP17252 672 aa3.97□□□□□ -1.77
PVT1-211ENST00000521600 CALB2P22676 271 aa3.97□□□□□ -1.77
PVT1-211ENST00000521600 BDNFP23560 247 aa3.97□□□□□ -1.77
PVT1-211ENST00000521600 CCND1P24385 295 aa3.97□□□□□ -1.77
PVT1-211ENST00000521600 CCNCP24863 283 aa3.97□□□□□ -1.77
PVT1-211ENST00000521600 PTPN3P26045 913 aa3.97□□□□□ -1.77
PVT1-211ENST00000521600 MGAT1P26572 445 aa3.97□□□□□ -1.77
PVT1-211ENST00000521600 PSMB4P28070 264 aa3.97□□□□□ -1.77
PVT1-211ENST00000521600 PTPN4P29074 926 aa3.97□□□□□ -1.77
PVT1-211ENST00000521600 EPHB2P29323 1055 aa3.97□□□□□ -1.77
PVT1-211ENST00000521600 CCR1P32246 355 aa3.97□□□□□ -1.77
PVT1-211ENST00000521600 POLD2P49005 469 aa3.97□□□□□ -1.77
PVT1-211ENST00000521600 SERPINB8P50452 374 aa3.97□□□□□ -1.77
PVT1-211ENST00000521600 KPNA2P52292 529 aaKnown RBP3.97□□□□□ -1.77
PVT1-211ENST00000521600 PRKAA2P54646 552 aa3.97□□□□□ -1.77
PVT1-211ENST00000521600 CSE1LP55060 971 aaKnown RBP3.97□□□□□ -1.77
PVT1-211ENST00000521600 SESN2P58004 480 aaPredicted RBP3.97□□□□□ -1.77
PVT1-211ENST00000521600 IL2P60568 153 aa3.97□□□□□ -1.77
PVT1-211ENST00000521600 IRX4P78413 519 aa3.97□□□□□ -1.77
PVT1-211ENST00000521600 TMPRSS15P98073 1019 aa3.97□□□□□ -1.77
PVT1-211ENST00000521600 MVKQ03426 396 aa3.97□□□□□ -1.77
PVT1-211ENST00000521600 CHRNEQ04844 493 aa3.97□□□□□ -1.77
PVT1-211ENST00000521600 YWHAHQ04917 246 aaPredicted RBP3.97□□□□□ -1.77
PVT1-211ENST00000521600 NIPAL4Q0D2K0 466 aa3.97□□□□□ -1.77
PVT1-211ENST00000521600 GALNT2Q10471 571 aa3.97□□□□□ -1.77
PVT1-211ENST00000521600 WASHC5Q12768 1159 aa3.97□□□□□ -1.77
PVT1-211ENST00000521600 ASPHQ12797 758 aa3.97□□□□□ -1.77
PVT1-211ENST00000521600 SMARCB1Q12824 385 aa3.97□□□□□ -1.77
PVT1-211ENST00000521600 CDH17Q12864 832 aa3.97□□□□□ -1.77
PVT1-211ENST00000521600 KRT72Q14CN4 511 aa3.97□□□□□ -1.77
PVT1-211ENST00000521600 PLCL1Q15111 1095 aa3.97□□□□□ -1.77
PVT1-211ENST00000521600 CHI3L2Q15782 390 aa3.97□□□□□ -1.77
PVT1-211ENST00000521600 NFE2Q16621 373 aaPredicted RBP3.97□□□□□ -1.77
PVT1-211ENST00000521600 UGP2Q16851 508 aa3.97□□□□□ -1.77
PVT1-211ENST00000521600 ANO4Q32M45 955 aa3.97□□□□□ -1.77
PVT1-211ENST00000521600 USP41Q3LFD5 358 aa3.97□□□□□ -1.77
PVT1-211ENST00000521600 CCDC153Q494R4 210 aa3.97□□□□□ -1.77
PVT1-211ENST00000521600 PABPC1LQ4VXU2 614 aaKnown RBP3.97□□□□□ -1.77
PVT1-211ENST00000521600 TEX44Q53QW1 395 aa3.97□□□□□ -1.77
PVT1-211ENST00000521600 SYCP2LQ5T4T6 812 aa3.97□□□□□ -1.77
PVT1-211ENST00000521600 MROH9Q5TGP6 573 aa3.97□□□□□ -1.77
PVT1-211ENST00000521600 SYPL2Q5VXT5 272 aa3.97□□□□□ -1.77
PVT1-211ENST00000521600 BSPRYQ5W0U4 402 aa3.97□□□□□ -1.77
PVT1-211ENST00000521600 BTBD8Q5XKL5 378 aa3.97□□□□□ -1.77
PVT1-211ENST00000521600 FAM91A1Q658Y4 838 aa3.97□□□□□ -1.77
PVT1-211ENST00000521600 PDPK2PQ6A1A2 396 aa3.97□□□□□ -1.77
PVT1-211ENST00000521600 FUT10Q6P4F1 479 aa3.97□□□□□ -1.77
PVT1-211ENST00000521600 GALNT18Q6P9A2 607 aa3.97□□□□□ -1.77
PVT1-211ENST00000521600 SLC23A3Q6PIS1 610 aa3.97□□□□□ -1.77
PVT1-211ENST00000521600 PRSS55Q6UWB4 352 aaPredicted RBP3.97□□□□□ -1.77
PVT1-211ENST00000521600 VITQ6UXI7 678 aa3.97□□□□□ -1.77
PVT1-211ENST00000521600 PACS1Q6VY07 963 aa3.97□□□□□ -1.77
PVT1-211ENST00000521600 TAC4Q86UU9 113 aa3.97□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms