RNA–Protein interactions for RNA: ENST00000519661.5

SPIDR-212, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 2

Gene SPIDR, Length 1,035 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-212ENST00000519661 RTP5Q14D33 572 aa11.34□□□□□ -0.59
SPIDR-212ENST00000519661 HES3Q5TGS1 186 aa11.34□□□□□ -0.59
SPIDR-212ENST00000519661 ANKRD22Q5VYY1 191 aa11.34□□□□□ -0.59
SPIDR-212ENST00000519661 KIAA0930Q6ICG6 404 aaPredicted RBP11.34□□□□□ -0.59
SPIDR-212ENST00000519661 SLC30A9Q6PML9 568 aa11.34□□□□□ -0.59
SPIDR-212ENST00000519661 PCGF5Q86SE9 256 aa11.34□□□□□ -0.59
SPIDR-212ENST00000519661 AMZ2Q86W34 360 aa11.34□□□□□ -0.59
SPIDR-212ENST00000519661 PNPLA1Q8N8W4 532 aa11.34□□□□□ -0.59
SPIDR-212ENST00000519661 KDF1Q8NAX2 398 aaPredicted RBP11.34□□□□□ -0.59
SPIDR-212ENST00000519661 PPHLN1Q8NEY8 458 aaKnown RBP11.34□□□□□ -0.59
SPIDR-212ENST00000519661 GPR150Q8NGU9 434 aa11.34□□□□□ -0.59
SPIDR-212ENST00000519661 SLC37A2Q8TED4 501 aa11.34□□□□□ -0.59
SPIDR-212ENST00000519661 ZFPM2Q8WW38 1151 aa11.34□□□□□ -0.59
SPIDR-212ENST00000519661 DPYSL5Q9BPU6 564 aa11.34□□□□□ -0.59
SPIDR-212ENST00000519661 CCDC3Q9BQI4 270 aa11.34□□□□□ -0.59
SPIDR-212ENST00000519661 NRSN2Q9GZP1 204 aa11.34□□□□□ -0.59
SPIDR-212ENST00000519661 TWSG1Q9GZX9 223 aa11.34□□□□□ -0.59
SPIDR-212ENST00000519661 DPEP2Q9H4A9 486 aa11.34□□□□□ -0.59
SPIDR-212ENST00000519661 CHRAC1Q9NRG0 131 aa11.34□□□□□ -0.59
SPIDR-212ENST00000519661 ZNHIT2Q9UHR6 403 aa11.34□□□□□ -0.59
SPIDR-212ENST00000519661 RABGEF1Q9UJ41 708 aa11.34□□□□□ -0.59
SPIDR-212ENST00000519661 PLEKHM1Q9Y4G2 1056 aa11.34□□□□□ -0.59
SPIDR-212ENST00000519661 GPSM3Q9Y4H4 160 aa11.34□□□□□ -0.59
SPIDR-212ENST00000519661 SLC30A1Q9Y6M5 507 aa11.34□□□□□ -0.59
SPIDR-212ENST00000519661 RNF215Q9Y6U7 377 aa11.34□□□□□ -0.59
SPIDR-212ENST00000519661 TDRD6O60522 2096 aaKnown RBP11.34□□□□□ -0.59
SPIDR-212ENST00000519661 PTPRBP23467 1997 aa11.34□□□□□ -0.59
SPIDR-212ENST00000519661 D6RAR5 112 aa11.33□□□□□ -0.6
SPIDR-212ENST00000519661 DNALI1O14645 258 aaPredicted RBP11.33□□□□□ -0.6
SPIDR-212ENST00000519661 MTX2O75431 263 aa11.33□□□□□ -0.6
SPIDR-212ENST00000519661 TOP3BO95985 862 aaKnown RBP11.33□□□□□ -0.6
SPIDR-212ENST00000519661 ACP5P13686 325 aa11.33□□□□□ -0.6
SPIDR-212ENST00000519661 ATP1B2P14415 290 aaPredicted RBP11.33□□□□□ -0.6
SPIDR-212ENST00000519661 PAFAH1B1P43034 410 aa11.33□□□□□ -0.6
SPIDR-212ENST00000519661 LMAN1P49257 510 aa11.33□□□□□ -0.6
SPIDR-212ENST00000519661 FOXC1Q12948 553 aa11.33□□□□□ -0.6
SPIDR-212ENST00000519661 RPA4Q13156 261 aa11.33□□□□□ -0.6
SPIDR-212ENST00000519661 GTF2H3Q13889 308 aa11.33□□□□□ -0.6
SPIDR-212ENST00000519661 FRG1Q14331 258 aaKnown RBP11.33□□□□□ -0.6
SPIDR-212ENST00000519661 MORF4L2Q15014 288 aa11.33□□□□□ -0.6
SPIDR-212ENST00000519661 DBN1Q16643 649 aa11.33□□□□□ -0.6
SPIDR-212ENST00000519661 TYSND1Q2T9J0 566 aa11.33□□□□□ -0.6
SPIDR-212ENST00000519661 AARS2Q5JTZ9 985 aaKnown RBP11.33□□□□□ -0.6
SPIDR-212ENST00000519661 ZNF648Q5T619 568 aaPredicted RBP11.33□□□□□ -0.6
SPIDR-212ENST00000519661 MARK2Q7KZI7 788 aaKnown RBP11.33□□□□□ -0.6
SPIDR-212ENST00000519661 CHST15Q7LFX5 561 aaPredicted RBP11.33□□□□□ -0.6
SPIDR-212ENST00000519661 SERPINA9Q86WD7 417 aa11.33□□□□□ -0.6
SPIDR-212ENST00000519661 JAMLQ86YT9 394 aa11.33□□□□□ -0.6
SPIDR-212ENST00000519661 SFTPA2Q8IWL1 248 aa11.33□□□□□ -0.6
SPIDR-212ENST00000519661 LMNTD2Q8IXW0 634 aa11.33□□□□□ -0.6
SPIDR-212ENST00000519661 AGGF1Q8N302 714 aaeCLIP11.33□□□□□ -0.62e-6■■□□□ 12.5
SPIDR-212ENST00000519661 BEND7Q8N7W2 519 aaPredicted RBP11.33□□□□□ -0.6
SPIDR-212ENST00000519661 SPATA4Q8NEY3 305 aa11.33□□□□□ -0.6
SPIDR-212ENST00000519661 OR4L1Q8NH43 312 aa11.33□□□□□ -0.6
SPIDR-212ENST00000519661 HDAC10Q969S8 669 aa11.33□□□□□ -0.6
SPIDR-212ENST00000519661 CCDC74AQ96AQ1 378 aa11.33□□□□□ -0.6
SPIDR-212ENST00000519661 SH3KBP1Q96B97 665 aa11.33□□□□□ -0.6
SPIDR-212ENST00000519661 SIGLEC10Q96LC7 697 aa11.33□□□□□ -0.6
SPIDR-212ENST00000519661 TTC25Q96NG3 672 aa11.33□□□□□ -0.6
SPIDR-212ENST00000519661 TCF12Q99081 682 aa11.33□□□□□ -0.6
SPIDR-212ENST00000519661 NAT9Q9BTE0 207 aa11.33□□□□□ -0.6
SPIDR-212ENST00000519661 PHACTR1Q9C0D0 580 aa11.33□□□□□ -0.6
SPIDR-212ENST00000519661 SUDS3Q9H7L9 328 aaPredicted RBP11.33□□□□□ -0.6
SPIDR-212ENST00000519661 POT1Q9NUX5 634 aa11.33□□□□□ -0.6
SPIDR-212ENST00000519661 PIH1D1Q9NWS0 290 aaKnown RBP11.33□□□□□ -0.6
SPIDR-212ENST00000519661 LRIT1Q9P2V4 623 aa11.33□□□□□ -0.6
SPIDR-212ENST00000519661 SLC2A6Q9UGQ3 507 aa11.33□□□□□ -0.6
SPIDR-212ENST00000519661 CRLS1Q9UJA2 301 aa11.33□□□□□ -0.6
SPIDR-212ENST00000519661 ACSL5Q9ULC5 683 aa11.33□□□□□ -0.6
SPIDR-212ENST00000519661 CLCA2Q9UQC9 943 aa11.33□□□□□ -0.6
SPIDR-212ENST00000519661 USP24Q9UPU5 2620 aa11.33□□□□□ -0.6
SPIDR-212ENST00000519661 MYLKQ15746 1914 aa11.33□□□□□ -0.6
SPIDR-212ENST00000519661 RP1P56715 2156 aa11.33□□□□□ -0.6
SPIDR-212ENST00000519661 WDFY3Q8IZQ1 3526 aa11.32□□□□□ -0.6
SPIDR-212ENST00000519661 ZCWPW2A0A1B0GU75 182 aa11.32□□□□□ -0.6
SPIDR-212ENST00000519661 SDR42E2A6NKP2 422 aa11.32□□□□□ -0.6
SPIDR-212ENST00000519661 B4DGG1 531 aa11.32□□□□□ -0.6
SPIDR-212ENST00000519661 TMX2-CTNND1H3BSU7 103 aa11.32□□□□□ -0.6
SPIDR-212ENST00000519661 KIF2AO00139 706 aaPredicted RBP11.32□□□□□ -0.6
SPIDR-212ENST00000519661 NDC80O14777 642 aa11.32□□□□□ -0.6
SPIDR-212ENST00000519661 PPM1DO15297 605 aa11.32□□□□□ -0.6
SPIDR-212ENST00000519661 ZW10O43264 779 aa11.32□□□□□ -0.6
SPIDR-212ENST00000519661 B4GAT1O43505 415 aa11.32□□□□□ -0.6
SPIDR-212ENST00000519661 POP7O75817 140 aaKnown RBP11.32□□□□□ -0.6
SPIDR-212ENST00000519661 SEC31AO94979 1220 aaKnown RBP11.32□□□□□ -0.6
SPIDR-212ENST00000519661 MT-CO3P00414 261 aa11.32□□□□□ -0.6
SPIDR-212ENST00000519661 MSH3P20585 1137 aa11.32□□□□□ -0.6
SPIDR-212ENST00000519661 IDSP22304 550 aa11.32□□□□□ -0.6
SPIDR-212ENST00000519661 RPS3P23396 243 aaKnown RBP eCLIP11.32□□□□□ -0.6
SPIDR-212ENST00000519661 CD151P48509 253 aa11.32□□□□□ -0.6
SPIDR-212ENST00000519661 CDKN1CP49918 316 aaPredicted RBP11.32□□□□□ -0.6
SPIDR-212ENST00000519661 DR1Q01658 176 aa11.32□□□□□ -0.6
SPIDR-212ENST00000519661 PLOD1Q02809 727 aaPredicted RBP11.32□□□□□ -0.6
SPIDR-212ENST00000519661 TUBB2AQ13885 445 aa11.32□□□□□ -0.6
SPIDR-212ENST00000519661 SEPT6Q14141 434 aa11.32□□□□□ -0.6
SPIDR-212ENST00000519661 TRIP13Q15645 432 aaPredicted RBP11.32□□□□□ -0.6
SPIDR-212ENST00000519661 ISXQ2M1V0 245 aa11.32□□□□□ -0.6
SPIDR-212ENST00000519661 CCDC38Q502W7 563 aa11.32□□□□□ -0.6
SPIDR-212ENST00000519661 CAPRIN2Q6IMN6 1127 aaKnown RBP11.32□□□□□ -0.6
SPIDR-212ENST00000519661 HIBCHQ6NVY1 386 aaPredicted RBP11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms