RNA–Protein interactions for RNA: ENST00000508668.1

HMGN1P11-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 11, humanhuman

BASIC

Gene HMGN1P11, Length 303 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P11-201ENST00000508668 CHD6Q8TD26 2715 aa3.79□□□□□ -1.8
HMGN1P11-201ENST00000508668 ANKRD11Q6UB99 2663 aaPredicted RBP3.78□□□□□ -1.8
HMGN1P11-201ENST00000508668 USP24Q9UPU5 2620 aa3.78□□□□□ -1.8
HMGN1P11-201ENST00000508668 GON4LQ3T8J9 2241 aa3.78□□□□□ -1.8
HMGN1P11-201ENST00000508668 PLXND1Q9Y4D7 1925 aa3.78□□□□□ -1.8
HMGN1P11-201ENST00000508668 IGF2RP11717 2491 aa3.78□□□□□ -1.8
HMGN1P11-201ENST00000508668 ATRXP46100 2492 aa3.78□□□□□ -1.8
HMGN1P11-201ENST00000508668 KMT2BQ9UMN6 2715 aaPredicted RBP3.78□□□□□ -1.8
HMGN1P11-201ENST00000508668 CCDC187A0A096LP49 1063 aa3.78□□□□□ -1.8
HMGN1P11-201ENST00000508668 A0A0A6YYK5 440 aaPredicted RBP3.78□□□□□ -1.8
HMGN1P11-201ENST00000508668 A0A1W2PQ67 120 aa3.78□□□□□ -1.8
HMGN1P11-201ENST00000508668 IGLON5A6NGN9 336 aa3.78□□□□□ -1.8
HMGN1P11-201ENST00000508668 ARHGAP42A6NI28 874 aa3.78□□□□□ -1.8
HMGN1P11-201ENST00000508668 C16orf96A6NNT2 1141 aa3.78□□□□□ -1.8
HMGN1P11-201ENST00000508668 RHPN2P1A8MT19 583 aa3.78□□□□□ -1.8
HMGN1P11-201ENST00000508668 BECN2A8MW95 431 aa3.78□□□□□ -1.8
HMGN1P11-201ENST00000508668 FOXN3O00409 490 aaPredicted RBP3.78□□□□□ -1.8
HMGN1P11-201ENST00000508668 TPP1O14773 563 aa3.78□□□□□ -1.8
HMGN1P11-201ENST00000508668 ARHGAP6O43182 974 aa3.78□□□□□ -1.8
HMGN1P11-201ENST00000508668 SNAP91O60641 907 aa3.78□□□□□ -1.8
HMGN1P11-201ENST00000508668 PALMO75781 387 aa3.78□□□□□ -1.8
HMGN1P11-201ENST00000508668 PIAS2O75928 621 aa3.78□□□□□ -1.8
HMGN1P11-201ENST00000508668 GFPT2O94808 682 aa3.78□□□□□ -1.8
HMGN1P11-201ENST00000508668 TNFSF15O95150 251 aa3.78□□□□□ -1.8
HMGN1P11-201ENST00000508668 CNOT4O95628 575 aaKnown RBP3.78□□□□□ -1.8
HMGN1P11-201ENST00000508668 GSRP00390 522 aa3.78□□□□□ -1.8
HMGN1P11-201ENST00000508668 CALCAP01258 141 aa3.78□□□□□ -1.8
HMGN1P11-201ENST00000508668 CSF2P04141 144 aa3.78□□□□□ -1.8
HMGN1P11-201ENST00000508668 ERBB2P04626 1255 aa3.78□□□□□ -1.8
HMGN1P11-201ENST00000508668 UGT2B4P06133 528 aa3.78□□□□□ -1.8
HMGN1P11-201ENST00000508668 PLEKP08567 350 aaPredicted RBP3.78□□□□□ -1.8
HMGN1P11-201ENST00000508668 MYBL2P10244 700 aa3.78□□□□□ -1.8
HMGN1P11-201ENST00000508668 OSMP13725 252 aa3.78□□□□□ -1.8
HMGN1P11-201ENST00000508668 TNFAIP3P21580 790 aa3.78□□□□□ -1.8
HMGN1P11-201ENST00000508668 GPD1P21695 349 aa3.78□□□□□ -1.8
HMGN1P11-201ENST00000508668 PON1P27169 355 aa3.78□□□□□ -1.8
HMGN1P11-201ENST00000508668 PI4KAP42356 2102 aa3.78□□□□□ -1.8
HMGN1P11-201ENST00000508668 GPR3P46089 330 aa3.78□□□□□ -1.8
HMGN1P11-201ENST00000508668 CXCR3P49682 368 aa3.78□□□□□ -1.8
HMGN1P11-201ENST00000508668 COPB1P53618 953 aaKnown RBP3.78□□□□□ -1.8
HMGN1P11-201ENST00000508668 EPHB1P54762 984 aa3.78□□□□□ -1.8
HMGN1P11-201ENST00000508668 AIF1P55008 147 aa3.78□□□□□ -1.8
HMGN1P11-201ENST00000508668 NRG3P56975 720 aa3.78□□□□□ -1.8
HMGN1P11-201ENST00000508668 CLDN2P57739 230 aa3.78□□□□□ -1.8
HMGN1P11-201ENST00000508668 SESN2P58004 480 aaPredicted RBP3.78□□□□□ -1.8
HMGN1P11-201ENST00000508668 TPI1P60174 286 aa3.78□□□□□ -1.8
HMGN1P11-201ENST00000508668 RAC3P60763 192 aa3.78□□□□□ -1.8
HMGN1P11-201ENST00000508668 SRSF2Q01130 221 aaKnown RBP3.78□□□□□ -1.8
HMGN1P11-201ENST00000508668 UBXN1Q04323 297 aa3.78□□□□□ -1.8
HMGN1P11-201ENST00000508668 BCL2L1Q07817 233 aa3.78□□□□□ -1.8
HMGN1P11-201ENST00000508668 ILF3Q12906 894 aaKnown RBP eCLIP3.78□□□□□ -1.8
HMGN1P11-201ENST00000508668 KLF1Q13351 362 aaPredicted RBP3.78□□□□□ -1.8
HMGN1P11-201ENST00000508668 ZNF235Q14590 738 aa3.78□□□□□ -1.8
HMGN1P11-201ENST00000508668 ACOX1Q15067 660 aa3.78□□□□□ -1.8
HMGN1P11-201ENST00000508668 TAF5Q15542 800 aa3.78□□□□□ -1.8
HMGN1P11-201ENST00000508668 DEFB133Q30KQ1 61 aa3.78□□□□□ -1.8
HMGN1P11-201ENST00000508668 MYLK3Q32MK0 819 aa3.78□□□□□ -1.8
HMGN1P11-201ENST00000508668 PARP15Q460N3 678 aa3.78□□□□□ -1.8
HMGN1P11-201ENST00000508668 HSP90AA4PQ58FG1 418 aa3.78□□□□□ -1.8
HMGN1P11-201ENST00000508668 MANEAQ5SRI9 462 aa3.78□□□□□ -1.8
HMGN1P11-201ENST00000508668 CCDC70Q6NSX1 233 aa3.78□□□□□ -1.8
HMGN1P11-201ENST00000508668 PGM2L1Q6PCE3 622 aa3.78□□□□□ -1.8
HMGN1P11-201ENST00000508668 GJB7Q6PEY0 223 aa3.78□□□□□ -1.8
HMGN1P11-201ENST00000508668 ENPP7Q6UWV6 458 aa3.78□□□□□ -1.8
HMGN1P11-201ENST00000508668 OLFML1Q6UWY5 402 aa3.78□□□□□ -1.8
HMGN1P11-201ENST00000508668 KYAT3Q6YP21 454 aaKnown RBP3.78□□□□□ -1.8
HMGN1P11-201ENST00000508668 DPY19L3Q6ZPD9 716 aa3.78□□□□□ -1.8
HMGN1P11-201ENST00000508668 BHLHA9Q7RTU4 235 aa3.78□□□□□ -1.8
HMGN1P11-201ENST00000508668 TAF8Q7Z7C8 310 aa3.78□□□□□ -1.8
HMGN1P11-201ENST00000508668 SLC47A2Q86VL8 602 aa3.78□□□□□ -1.8
HMGN1P11-201ENST00000508668 DNAAF5Q86Y56 855 aa3.78□□□□□ -1.8
HMGN1P11-201ENST00000508668 LYSMD2Q8IV50 215 aa3.78□□□□□ -1.8
HMGN1P11-201ENST00000508668 ZC3H3Q8IXZ2 948 aaKnown RBP3.78□□□□□ -1.8
HMGN1P11-201ENST00000508668 SDR16C5Q8N3Y7 309 aa3.78□□□□□ -1.8
HMGN1P11-201ENST00000508668 FBXO39Q8N4B4 442 aa3.78□□□□□ -1.8
HMGN1P11-201ENST00000508668 DCBLD1Q8N8Z6 715 aa3.78□□□□□ -1.8
HMGN1P11-201ENST00000508668 DENND6BQ8NEG7 585 aa3.78□□□□□ -1.8
HMGN1P11-201ENST00000508668 ZNF548Q8NEK5 533 aaPredicted RBP3.78□□□□□ -1.8
HMGN1P11-201ENST00000508668 ZNF397Q8NF99 534 aaPredicted RBP3.78□□□□□ -1.8
HMGN1P11-201ENST00000508668 OR7D4Q8NG98 312 aa3.78□□□□□ -1.8
HMGN1P11-201ENST00000508668 OR2AP1Q8NGE2 309 aa3.78□□□□□ -1.8
HMGN1P11-201ENST00000508668 OR2A12Q8NGT7 310 aa3.78□□□□□ -1.8
HMGN1P11-201ENST00000508668 FAM172AQ8WUF8 416 aa3.78□□□□□ -1.8
HMGN1P11-201ENST00000508668 PDCD6IPQ8WUM4 868 aaKnown RBP3.78□□□□□ -1.8
HMGN1P11-201ENST00000508668 SHC3Q92529 594 aa3.78□□□□□ -1.8
HMGN1P11-201ENST00000508668 GCDHQ92947 438 aaPredicted RBP3.78□□□□□ -1.8
HMGN1P11-201ENST00000508668 GFM2Q969S9 779 aaKnown RBP3.78□□□□□ -1.8
HMGN1P11-201ENST00000508668 KIAA1143Q96AT1 154 aaPredicted RBP3.78□□□□□ -1.8
HMGN1P11-201ENST00000508668 ISG20Q96AZ6 181 aaKnown RBP3.78□□□□□ -1.8
HMGN1P11-201ENST00000508668 ARRDC3Q96B67 414 aa3.78□□□□□ -1.8
HMGN1P11-201ENST00000508668 TMEM159Q96B96 161 aa3.78□□□□□ -1.8
HMGN1P11-201ENST00000508668 APOLD1Q96LR9 279 aa3.78□□□□□ -1.8
HMGN1P11-201ENST00000508668 CFAP57Q96MR6 1250 aa3.78□□□□□ -1.8
HMGN1P11-201ENST00000508668 KLHL32Q96NJ5 620 aa3.78□□□□□ -1.8
HMGN1P11-201ENST00000508668 LMF1Q96S06 567 aa3.78□□□□□ -1.8
HMGN1P11-201ENST00000508668 TBCBQ99426 244 aa3.78□□□□□ -1.8
HMGN1P11-201ENST00000508668 C11orf70Q9BRQ4 267 aa3.78□□□□□ -1.8
HMGN1P11-201ENST00000508668 SOX7Q9BT81 388 aa3.78□□□□□ -1.8
HMGN1P11-201ENST00000508668 WRAP53Q9BUR4 548 aaKnown RBP3.78□□□□□ -1.8
HMGN1P11-201ENST00000508668 STK33Q9BYT3 514 aa3.78□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms