RNA–Protein interactions for RNA: ENST00000494780.1

COL27A1-208, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 4

Gene COL27A1, Length 514 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-208ENST00000494780 EPHA6Q9UF33 1036 aa22.83■■□□□ 1.25
COL27A1-208ENST00000494780 FAM153AQ9UHL3 310 aa22.83■■□□□ 1.25
COL27A1-208ENST00000494780 LOC285095A0A1B0GVY8 99 aa22.82■■□□□ 1.24
COL27A1-208ENST00000494780 OR52A4PA6NMU1 304 aa22.82■■□□□ 1.24
COL27A1-208ENST00000494780 TPM1P09493 284 aa22.82■■□□□ 1.24
COL27A1-208ENST00000494780 ZNF28P17035 718 aa22.82■■□□□ 1.24
COL27A1-208ENST00000494780 CASRP41180 1078 aa22.82■■□□□ 1.24
COL27A1-208ENST00000494780 DRG2P55039 364 aaKnown RBP22.82■■□□□ 1.24
COL27A1-208ENST00000494780 SH3BP2P78314 561 aa22.82■■□□□ 1.24
COL27A1-208ENST00000494780 GPR18Q14330 331 aa22.82■■□□□ 1.24
COL27A1-208ENST00000494780 SKIDA1Q1XH10 827 aa22.82■■□□□ 1.24
COL27A1-208ENST00000494780 ZDHHC20Q5W0Z9 365 aa22.82■■□□□ 1.24
COL27A1-208ENST00000494780 TRAPPC5Q8IUR0 188 aa22.82■■□□□ 1.24
COL27A1-208ENST00000494780 RASGRP3Q8IV61 690 aa22.82■■□□□ 1.24
COL27A1-208ENST00000494780 GDAP1Q8TB36 358 aa22.82■■□□□ 1.24
COL27A1-208ENST00000494780 TFB1MQ8WVM0 346 aaKnown RBP22.82■■□□□ 1.24
COL27A1-208ENST00000494780 KLHL6Q8WZ60 621 aa22.82■■□□□ 1.24
COL27A1-208ENST00000494780 TTC25Q96NG3 672 aa22.82■■□□□ 1.24
COL27A1-208ENST00000494780 RAB33BQ9H082 229 aa22.82■■□□□ 1.24
COL27A1-208ENST00000494780 EPN3Q9H201 632 aa22.82■■□□□ 1.24
COL27A1-208ENST00000494780 NHEJ1Q9H9Q4 299 aaPredicted RBP22.82■■□□□ 1.24
COL27A1-208ENST00000494780 ZNF71Q9NQZ8 489 aaPredicted RBP22.82■■□□□ 1.24
COL27A1-208ENST00000494780 ABHD10Q9NUJ1 306 aa22.82■■□□□ 1.24
COL27A1-208ENST00000494780 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP22.82■■□□□ 1.24
COL27A1-208ENST00000494780 PCDHB3Q9Y5E6 796 aa22.82■■□□□ 1.24
COL27A1-208ENST00000494780 MAST4O15021 2626 aa22.81■■□□□ 1.24
COL27A1-208ENST00000494780 GOLGA6L3A6NEY3 463 aa22.81■■□□□ 1.24
COL27A1-208ENST00000494780 MTSS1O43312 755 aa22.81■■□□□ 1.24
COL27A1-208ENST00000494780 EPOP01588 193 aa22.81■■□□□ 1.24
COL27A1-208ENST00000494780 FGF5P12034 268 aa22.81■■□□□ 1.24
COL27A1-208ENST00000494780 F8A1P23610 371 aa22.81■■□□□ 1.24
COL27A1-208ENST00000494780 CD68P34810 354 aaPredicted RBP22.81■■□□□ 1.24
COL27A1-208ENST00000494780 DLSTP36957 453 aa22.81■■□□□ 1.24
COL27A1-208ENST00000494780 HALP42357 657 aa22.81■■□□□ 1.24
COL27A1-208ENST00000494780 CDKN2BP42772 138 aa22.81■■□□□ 1.24
COL27A1-208ENST00000494780 WNT3AP56704 352 aa22.81■■□□□ 1.24
COL27A1-208ENST00000494780 WASHC5Q12768 1159 aa22.81■■□□□ 1.24
COL27A1-208ENST00000494780 SEPT6Q14141 434 aa22.81■■□□□ 1.24
COL27A1-208ENST00000494780 TFDP2Q14188 446 aa22.81■■□□□ 1.24
COL27A1-208ENST00000494780 TCEAL1Q15170 157 aa22.81■■□□□ 1.24
COL27A1-208ENST00000494780 CACHD1Q5VU97 1274 aa22.81■■□□□ 1.24
COL27A1-208ENST00000494780 CYB5D1Q6P9G0 228 aa22.81■■□□□ 1.24
COL27A1-208ENST00000494780 KDELC1Q6UW63 502 aa22.81■■□□□ 1.24
COL27A1-208ENST00000494780 TTC30BQ8N4P2 665 aa22.81■■□□□ 1.24
COL27A1-208ENST00000494780 ABHD17AQ96GS6 310 aa22.81■■□□□ 1.24
COL27A1-208ENST00000494780 IL26Q9NPH9 171 aa22.81■■□□□ 1.24
COL27A1-208ENST00000494780 HACD3Q9P035 362 aa22.81■■□□□ 1.24
COL27A1-208ENST00000494780 TRIM10Q9UDY6 481 aa22.81■■□□□ 1.24
COL27A1-208ENST00000494780 KCTD3Q9Y597 815 aa22.81■■□□□ 1.24
COL27A1-208ENST00000494780 MRPS18BQ9Y676 258 aaKnown RBP22.81■■□□□ 1.24
COL27A1-208ENST00000494780 ZNF106Q9H2Y7 1883 aaKnown RBP22.81■■□□□ 1.24
COL27A1-208ENST00000494780 CYSRT1A8MQ03 144 aa22.8■■□□□ 1.24
COL27A1-208ENST00000494780 KIF1CO43896 1103 aaKnown RBP22.8■■□□□ 1.24
COL27A1-208ENST00000494780 NDUFA10O95299 355 aa22.8■■□□□ 1.24
COL27A1-208ENST00000494780 TNNT1P13805 278 aa22.8■■□□□ 1.24
COL27A1-208ENST00000494780 SPAM1P38567 509 aa22.8■■□□□ 1.24
COL27A1-208ENST00000494780 TNNT3P45378 269 aaPredicted RBP22.8■■□□□ 1.24
COL27A1-208ENST00000494780 TAZQ16635 292 aa22.8■■□□□ 1.24
COL27A1-208ENST00000494780 LARP7Q4G0J3 582 aaKnown RBP eCLIP22.8■■□□□ 1.24
COL27A1-208ENST00000494780 ATP1A1-AS1Q5TC04 95 aa22.8■■□□□ 1.24
COL27A1-208ENST00000494780 IRGCQ6NXR0 463 aa22.8■■□□□ 1.24
COL27A1-208ENST00000494780 GALNT6Q8NCL4 622 aa22.8■■□□□ 1.24
COL27A1-208ENST00000494780 STAMBPL1Q96FJ0 436 aa22.8■■□□□ 1.24
COL27A1-208ENST00000494780 ZCCHC2Q9C0B9 1178 aaKnown RBP22.8■■□□□ 1.24
COL27A1-208ENST00000494780 SAE1Q9UBE0 346 aaPredicted RBP22.8■■□□□ 1.24
COL27A1-208ENST00000494780 CROTQ9UKG9 612 aa22.8■■□□□ 1.24
COL27A1-208ENST00000494780 INTUQ9ULD6 942 aa22.8■■□□□ 1.24
COL27A1-208ENST00000494780 WDR37Q9Y2I8 494 aa22.8■■□□□ 1.24
COL27A1-208ENST00000494780 SPOPO43791 374 aa22.79■■□□□ 1.24
COL27A1-208ENST00000494780 KIAA0754O94854 1291 aa22.79■■□□□ 1.24
COL27A1-208ENST00000494780 NELFEP18615 380 aaKnown RBP22.79■■□□□ 1.24
COL27A1-208ENST00000494780 NFKB1P19838 968 aa22.79■■□□□ 1.24
COL27A1-208ENST00000494780 COMTP21964 271 aa22.79■■□□□ 1.24
COL27A1-208ENST00000494780 DMPKQ09013 629 aa22.79■■□□□ 1.24
COL27A1-208ENST00000494780 SIRPB2Q5JXA9 342 aa22.79■■□□□ 1.24
COL27A1-208ENST00000494780 LDLRAP1Q5SW96 308 aa22.79■■□□□ 1.24
COL27A1-208ENST00000494780 FAM92BQ6ZTR7 304 aa22.79■■□□□ 1.24
COL27A1-208ENST00000494780 AMZ2Q86W34 360 aa22.79■■□□□ 1.24
COL27A1-208ENST00000494780 VSTM4Q8IW00 320 aa22.79■■□□□ 1.24
COL27A1-208ENST00000494780 IL17CQ9P0M4 197 aa22.79■■□□□ 1.24
COL27A1-208ENST00000494780 KCND3Q9UK17 655 aa22.79■■□□□ 1.24
COL27A1-208ENST00000494780 HYOU1Q9Y4L1 999 aa22.79■■□□□ 1.24
COL27A1-208ENST00000494780 KCNMB2Q9Y691 235 aa22.79■■□□□ 1.24
COL27A1-208ENST00000494780 DNMT3AQ9Y6K1 912 aaPredicted RBP22.79■■□□□ 1.24
COL27A1-208ENST00000494780 PTPN13Q12923 2485 aa22.79■■□□□ 1.24
COL27A1-208ENST00000494780 CST8O60676 142 aa22.78■■□□□ 1.24
COL27A1-208ENST00000494780 MFAP3LO75121 409 aa22.78■■□□□ 1.24
COL27A1-208ENST00000494780 SPAG6O75602 509 aa22.78■■□□□ 1.24
COL27A1-208ENST00000494780 MT-ND3P03897 115 aa22.78■■□□□ 1.24
COL27A1-208ENST00000494780 PECAM1P16284 738 aaPredicted RBP22.78■■□□□ 1.24
COL27A1-208ENST00000494780 NOMO1Q15155 1222 aa22.78■■□□□ 1.24
COL27A1-208ENST00000494780 LACTB2Q53H82 288 aaPredicted RBP22.78■■□□□ 1.24
COL27A1-208ENST00000494780 COLEC12Q5KU26 742 aa22.78■■□□□ 1.24
COL27A1-208ENST00000494780 PPP1R3BQ86XI6 285 aa22.78■■□□□ 1.24
COL27A1-208ENST00000494780 ELMO2Q96JJ3 720 aa22.78■■□□□ 1.24
COL27A1-208ENST00000494780 FCRL5Q96RD9 977 aa22.78■■□□□ 1.24
COL27A1-208ENST00000494780 VAT1Q99536 393 aa22.78■■□□□ 1.24
COL27A1-208ENST00000494780 SEMA5BQ9P283 1151 aa22.78■■□□□ 1.24
COL27A1-208ENST00000494780 KLHL8Q9P2G9 620 aaPredicted RBP22.78■■□□□ 1.24
COL27A1-208ENST00000494780 LNPEPQ9UIQ6 1025 aa22.78■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms