RNA–Protein interactions for RNA: ENST00000493587.1

VPS13B-205, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 2

Gene VPS13B, Length 3,485 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-205ENST00000493587 EXOSC8Q96B26 276 aaKnown RBP6.8□□□□□ -1.32
VPS13B-205ENST00000493587 FIZ1Q96SL8 496 aa6.8□□□□□ -1.32
VPS13B-205ENST00000493587 ZBTB18Q99592 522 aa6.8□□□□□ -1.32
VPS13B-205ENST00000493587 C19orf43Q9BQ61 176 aa6.8□□□□□ -1.32
VPS13B-205ENST00000493587 HERPUD2Q9BSE4 406 aa6.8□□□□□ -1.32
VPS13B-205ENST00000493587 DPCDQ9BVM2 203 aaPredicted RBP6.8□□□□□ -1.32
VPS13B-205ENST00000493587 C1QTNF6Q9BXI9 259 aa6.8□□□□□ -1.32
VPS13B-205ENST00000493587 FGFBP2Q9BYJ0 223 aa6.8□□□□□ -1.32
VPS13B-205ENST00000493587 BRD9Q9H8M2 597 aa6.8□□□□□ -1.32
VPS13B-205ENST00000493587 UFSP2Q9NUQ7 469 aa6.8□□□□□ -1.32
VPS13B-205ENST00000493587 RAPGEFL1Q9UHV5 662 aa6.8□□□□□ -1.32
VPS13B-205ENST00000493587 ATP8B3O60423 1300 aa6.79□□□□□ -1.32
VPS13B-205ENST00000493587 TCRBV9S1A1TA0A576 114 aa6.79□□□□□ -1.32
VPS13B-205ENST00000493587 DHRS12A0PJE2 317 aa6.79□□□□□ -1.32
VPS13B-205ENST00000493587 EFCAB9A8MZ26 197 aa6.79□□□□□ -1.32
VPS13B-205ENST00000493587 WDR64B1ANS9 1081 aa6.79□□□□□ -1.32
VPS13B-205ENST00000493587 ZNF487B1APH4 448 aa6.79□□□□□ -1.32
VPS13B-205ENST00000493587 APOC3P02656 99 aa6.79□□□□□ -1.32
VPS13B-205ENST00000493587 CHRNA1P02708 482 aa6.79□□□□□ -1.32
VPS13B-205ENST00000493587 ACADLP28330 430 aa6.79□□□□□ -1.32
VPS13B-205ENST00000493587 HMGCLP35914 325 aa6.79□□□□□ -1.32
VPS13B-205ENST00000493587 TGFBR1P36897 503 aa6.79□□□□□ -1.32
VPS13B-205ENST00000493587 PTGER2P43116 358 aa6.79□□□□□ -1.32
VPS13B-205ENST00000493587 CASP4P49662 377 aa6.79□□□□□ -1.32
VPS13B-205ENST00000493587 GZMKP49863 264 aa6.79□□□□□ -1.32
VPS13B-205ENST00000493587 YWHAEP62258 255 aaKnown RBP6.79□□□□□ -1.32
VPS13B-205ENST00000493587 CHAF1BQ13112 559 aa6.79□□□□□ -1.32
VPS13B-205ENST00000493587 RPA4Q13156 261 aa6.79□□□□□ -1.32
VPS13B-205ENST00000493587 ZACNQ401N2 412 aa6.79□□□□□ -1.32
VPS13B-205ENST00000493587 PITRM1Q5JRX3 1037 aa6.79□□□□□ -1.32
VPS13B-205ENST00000493587 DGKKQ5KSL6 1271 aa6.79□□□□□ -1.32
VPS13B-205ENST00000493587 FNBP1LQ5T0N5 605 aa6.79□□□□□ -1.32
VPS13B-205ENST00000493587 JADE1Q6IE81 842 aa6.79□□□□□ -1.32
VPS13B-205ENST00000493587 ANGPTL8Q6UXH0 198 aa6.79□□□□□ -1.32
VPS13B-205ENST00000493587 SLC16A12Q6ZSM3 486 aa6.79□□□□□ -1.32
VPS13B-205ENST00000493587 PIGZQ86VD9 579 aa6.79□□□□□ -1.32
VPS13B-205ENST00000493587 CYP4Z2PQ8N1L4 340 aa6.79□□□□□ -1.32
VPS13B-205ENST00000493587 ANKFN1Q8N957 763 aa6.79□□□□□ -1.32
VPS13B-205ENST00000493587 MFSD2AQ8NA29 543 aa6.79□□□□□ -1.32
VPS13B-205ENST00000493587 OR6M1Q8NGM8 313 aa6.79□□□□□ -1.32
VPS13B-205ENST00000493587 LGALS12Q96DT0 336 aa6.79□□□□□ -1.32
VPS13B-205ENST00000493587 CMTM3Q96MX0 182 aa6.79□□□□□ -1.32
VPS13B-205ENST00000493587 MND1Q9BWT6 205 aa6.79□□□□□ -1.32
VPS13B-205ENST00000493587 ZDHHC4Q9NPG8 344 aa6.79□□□□□ -1.32
VPS13B-205ENST00000493587 RAB20Q9NX57 234 aa6.79□□□□□ -1.32
VPS13B-205ENST00000493587 EGFL7Q9UHF1 273 aa6.79□□□□□ -1.32
VPS13B-205ENST00000493587 TRPM7Q96QT4 1865 aa6.79□□□□□ -1.32
VPS13B-205ENST00000493587 EML1O00423 815 aa6.79□□□□□ -1.32
VPS13B-205ENST00000493587 GRIN3BO60391 1043 aa6.79□□□□□ -1.32
VPS13B-205ENST00000493587 BRINP1O60477 761 aa6.79□□□□□ -1.32
VPS13B-205ENST00000493587 JUNBP17275 347 aaPredicted RBP6.79□□□□□ -1.32
VPS13B-205ENST00000493587 UGT2B10P36537 528 aa6.79□□□□□ -1.32
VPS13B-205ENST00000493587 ARCN1P48444 511 aaKnown RBP6.79□□□□□ -1.32
VPS13B-205ENST00000493587 GCLMP48507 274 aa6.79□□□□□ -1.32
VPS13B-205ENST00000493587 CASP6P55212 293 aa6.79□□□□□ -1.32
VPS13B-205ENST00000493587 OSTNP61366 133 aa6.79□□□□□ -1.32
VPS13B-205ENST00000493587 NKX3-2P78367 333 aa6.79□□□□□ -1.32
VPS13B-205ENST00000493587 MADCAM1Q13477 382 aa6.79□□□□□ -1.32
VPS13B-205ENST00000493587 IL18R1Q13478 541 aa6.79□□□□□ -1.32
VPS13B-205ENST00000493587 PICALMQ13492 652 aa6.79□□□□□ -1.32
VPS13B-205ENST00000493587 TUBB3Q13509 450 aa6.79□□□□□ -1.32
VPS13B-205ENST00000493587 CTF1Q16619 201 aa6.79□□□□□ -1.32
VPS13B-205ENST00000493587 TUSC1Q2TAM9 212 aa6.79□□□□□ -1.32
VPS13B-205ENST00000493587 PARP15Q460N3 678 aa6.79□□□□□ -1.32
VPS13B-205ENST00000493587 GLRA4Q5JXX5 417 aa6.79□□□□□ -1.32
VPS13B-205ENST00000493587 CES4AQ5XG92 561 aa6.79□□□□□ -1.32
VPS13B-205ENST00000493587 NT5DC4Q86YG4 428 aa6.79□□□□□ -1.32
VPS13B-205ENST00000493587 ZNF555Q8NEP9 628 aa6.79□□□□□ -1.32
VPS13B-205ENST00000493587 CLHC1Q8NHS4 586 aa6.79□□□□□ -1.32
VPS13B-205ENST00000493587 STON2Q8WXE9 905 aa6.79□□□□□ -1.32
VPS13B-205ENST00000493587 RPL3LQ92901 407 aaKnown RBP6.79□□□□□ -1.32
VPS13B-205ENST00000493587 ZNF566Q969W8 418 aa6.79□□□□□ -1.32
VPS13B-205ENST00000493587 PFDN5Q99471 154 aa6.79□□□□□ -1.32
VPS13B-205ENST00000493587 VAT1Q99536 393 aa6.79□□□□□ -1.32
VPS13B-205ENST00000493587 ALOXE3Q9BYJ1 711 aa6.79□□□□□ -1.32
VPS13B-205ENST00000493587 ZNF518BQ9C0D4 1074 aa6.79□□□□□ -1.32
VPS13B-205ENST00000493587 MMP27Q9H306 513 aa6.79□□□□□ -1.32
VPS13B-205ENST00000493587 LRRC4Q9HBW1 653 aa6.79□□□□□ -1.32
VPS13B-205ENST00000493587 SPON1Q9HCB6 807 aa6.79□□□□□ -1.32
VPS13B-205ENST00000493587 NECTIN3Q9NQS3 549 aa6.79□□□□□ -1.32
VPS13B-205ENST00000493587 CHRAC1Q9NRG0 131 aa6.79□□□□□ -1.32
VPS13B-205ENST00000493587 FBXL12Q9NXK8 326 aa6.79□□□□□ -1.32
VPS13B-205ENST00000493587 LAMP5Q9UJQ1 280 aa6.79□□□□□ -1.32
VPS13B-205ENST00000493587 ADAM30Q9UKF2 790 aa6.79□□□□□ -1.32
VPS13B-205ENST00000493587 ASB4Q9Y574 426 aa6.79□□□□□ -1.32
VPS13B-205ENST00000493587 COPG1Q9Y678 874 aaKnown RBP6.79□□□□□ -1.32
VPS13B-205ENST00000493587 HSPE1-MOB4S4R3N1 261 aa6.79□□□□□ -1.32
VPS13B-205ENST00000493587 MYH9P35579 1960 aaKnown RBP6.79□□□□□ -1.32
VPS13B-205ENST00000493587 ANKRD12Q6UB98 2062 aa6.79□□□□□ -1.32
VPS13B-205ENST00000493587 NRCAMQ92823 1304 aa6.79□□□□□ -1.32
VPS13B-205ENST00000493587 IGLV3-22A0A075B6J6 115 aa6.78□□□□□ -1.32
VPS13B-205ENST00000493587 A0A1W2PRQ8 180 aa6.78□□□□□ -1.32
VPS13B-205ENST00000493587 METTL21EPA6NDL7 271 aa6.78□□□□□ -1.32
VPS13B-205ENST00000493587 ACOT8O14734 319 aa6.78□□□□□ -1.32
VPS13B-205ENST00000493587 SNNO75324 88 aaPredicted RBP6.78□□□□□ -1.32
VPS13B-205ENST00000493587 AKAP3O75969 853 aa6.78□□□□□ -1.32
VPS13B-205ENST00000493587 PDE9AO76083 593 aa6.78□□□□□ -1.32
VPS13B-205ENST00000493587 BEST1O76090 585 aa6.78□□□□□ -1.32
VPS13B-205ENST00000493587 MICAL2O94851 1124 aa6.78□□□□□ -1.32
VPS13B-205ENST00000493587 EPOP01588 193 aa6.78□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms