RNA–Protein interactions for RNA: ENST00000493191.1

HMG20B-214, Transcript of high mobility group 20B, humanhuman

TSL 3

Gene HMG20B, Length 852 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-214ENST00000493191 KCND3Q9UK17 655 aa22.12■■□□□ 1.13
HMG20B-214ENST00000493191 PADI1Q9ULC6 663 aa22.12■■□□□ 1.13
HMG20B-214ENST00000493191 SPO11Q9Y5K1 396 aa22.12■■□□□ 1.13
HMG20B-214ENST00000493191 USP9XQ93008 2570 aaPredicted RBP22.11■■□□□ 1.13
HMG20B-214ENST00000493191 PIPSLA2A3N6 862 aa22.11■■□□□ 1.13
HMG20B-214ENST00000493191 C3orf70A6NLC5 250 aaPredicted RBP22.11■■□□□ 1.13
HMG20B-214ENST00000493191 MLLT10P55197 1068 aa22.11■■□□□ 1.13
HMG20B-214ENST00000493191 PPP1CAP62136 330 aa22.11■■□□□ 1.13
HMG20B-214ENST00000493191 TPM4P67936 248 aa22.11■■□□□ 1.13
HMG20B-214ENST00000493191 ATP13A5Q4VNC0 1218 aa22.11■■□□□ 1.13
HMG20B-214ENST00000493191 AGAP9Q5VTM2 703 aa22.11■■□□□ 1.13
HMG20B-214ENST00000493191 SLC9A4Q6AI14 798 aa22.11■■□□□ 1.13
HMG20B-214ENST00000493191 CCDC70Q6NSX1 233 aa22.11■■□□□ 1.13
HMG20B-214ENST00000493191 TCTN3Q6NUS6 607 aa22.11■■□□□ 1.13
HMG20B-214ENST00000493191 ASB18Q6ZVZ8 466 aa22.11■■□□□ 1.13
HMG20B-214ENST00000493191 PPP1R3BQ86XI6 285 aa22.11■■□□□ 1.13
HMG20B-214ENST00000493191 GDAP1Q8TB36 358 aa22.11■■□□□ 1.13
HMG20B-214ENST00000493191 MIB2Q96AX9 1013 aa22.11■■□□□ 1.13
HMG20B-214ENST00000493191 TADA1Q96BN2 335 aa22.11■■□□□ 1.13
HMG20B-214ENST00000493191 MAK16Q9BXY0 300 aaKnown RBP22.11■■□□□ 1.13
HMG20B-214ENST00000493191 LCMT1Q9UIC8 334 aa22.11■■□□□ 1.13
HMG20B-214ENST00000493191 TLK1Q9UKI8 766 aa22.11■■□□□ 1.13
HMG20B-214ENST00000493191 MAN2B2Q9Y2E5 1009 aa22.11■■□□□ 1.13
HMG20B-214ENST00000493191 APOL1O14791 398 aa22.1■■□□□ 1.13
HMG20B-214ENST00000493191 PMPCBO75439 489 aa22.1■■□□□ 1.13
HMG20B-214ENST00000493191 CREG1O75629 220 aa22.1■■□□□ 1.13
HMG20B-214ENST00000493191 NDST3O95803 873 aa22.1■■□□□ 1.13
HMG20B-214ENST00000493191 GP1BBP13224 206 aa22.1■■□□□ 1.13
HMG20B-214ENST00000493191 NELFEP18615 380 aaKnown RBP22.1■■□□□ 1.13
HMG20B-214ENST00000493191 CASP14P31944 242 aa22.1■■□□□ 1.13
HMG20B-214ENST00000493191 TMEM115Q12893 351 aaPredicted RBP22.1■■□□□ 1.13
HMG20B-214ENST00000493191 DNASE1L3Q13609 305 aa22.1■■□□□ 1.13
HMG20B-214ENST00000493191 LARP7Q4G0J3 582 aaKnown RBP eCLIP22.1■■□□□ 1.13
HMG20B-214ENST00000493191 C11orf96Q7Z7L8 435 aa22.1■■□□□ 1.13
HMG20B-214ENST00000493191 RBM12BQ8IXT5 1001 aaKnown RBP22.1■■□□□ 1.13
HMG20B-214ENST00000493191 FAM26EQ8N5C1 309 aa22.1■■□□□ 1.13
HMG20B-214ENST00000493191 IQCDQ96DY2 449 aa22.1■■□□□ 1.13
HMG20B-214ENST00000493191 OLFM3Q96PB7 478 aa22.1■■□□□ 1.13
HMG20B-214ENST00000493191 VPS35Q96QK1 796 aa22.1■■□□□ 1.13
HMG20B-214ENST00000493191 LHX9Q9NQ69 397 aa22.1■■□□□ 1.13
HMG20B-214ENST00000493191 UBP1Q9NZI7 540 aa22.1■■□□□ 1.13
HMG20B-214ENST00000493191 EPHA6Q9UF33 1036 aa22.1■■□□□ 1.13
HMG20B-214ENST00000493191 SPTAN1Q13813 2472 aaKnown RBP22.09■■□□□ 1.13
HMG20B-214ENST00000493191 GOLGA6L3A6NEY3 463 aa22.09■■□□□ 1.13
HMG20B-214ENST00000493191 RFPL1O75677 317 aa22.09■■□□□ 1.13
HMG20B-214ENST00000493191 TIAF1O95411 115 aa22.09■■□□□ 1.13
HMG20B-214ENST00000493191 VCLP18206 1134 aa22.09■■□□□ 1.13
HMG20B-214ENST00000493191 GTF2H3Q13889 308 aa22.09■■□□□ 1.13
HMG20B-214ENST00000493191 KCNAB1Q14722 419 aa22.09■■□□□ 1.13
HMG20B-214ENST00000493191 CT55Q8WUE5 264 aa22.09■■□□□ 1.13
HMG20B-214ENST00000493191 GLOD4Q9HC38 313 aa22.09■■□□□ 1.13
HMG20B-214ENST00000493191 PCDHGA6Q9Y5G7 932 aa22.09■■□□□ 1.13
HMG20B-214ENST00000493191 SPTBN1Q01082 2364 aaKnown RBP22.09■■□□□ 1.13
HMG20B-214ENST00000493191 IGHV5-51A0A0C4DH38 117 aa22.08■■□□□ 1.13
HMG20B-214ENST00000493191 ZNF487B1APH4 448 aa22.08■■□□□ 1.13
HMG20B-214ENST00000493191 PPP1R12AO14974 1030 aaPredicted RBP22.08■■□□□ 1.13
HMG20B-214ENST00000493191 MT-ND3P03897 115 aa22.08■■□□□ 1.13
HMG20B-214ENST00000493191 FOLR1P15328 257 aa22.08■■□□□ 1.13
HMG20B-214ENST00000493191 HALP42357 657 aa22.08■■□□□ 1.13
HMG20B-214ENST00000493191 PMS2P54278 862 aa22.08■■□□□ 1.13
HMG20B-214ENST00000493191 DYNLT1P63172 113 aa22.08■■□□□ 1.13
HMG20B-214ENST00000493191 NOMO1Q15155 1222 aa22.08■■□□□ 1.13
HMG20B-214ENST00000493191 SLC18A3Q16572 532 aa22.08■■□□□ 1.13
HMG20B-214ENST00000493191 TEX44Q53QW1 395 aa22.08■■□□□ 1.13
HMG20B-214ENST00000493191 PWWP2BQ6NUJ5 590 aa22.08■■□□□ 1.13
HMG20B-214ENST00000493191 RFX6Q8HWS3 928 aa22.08■■□□□ 1.13
HMG20B-214ENST00000493191 SIDT2Q8NBJ9 832 aaKnown RBP22.08■■□□□ 1.13
HMG20B-214ENST00000493191 RAB33BQ9H082 229 aa22.08■■□□□ 1.13
HMG20B-214ENST00000493191 PDE7BQ9NP56 450 aa22.08■■□□□ 1.13
HMG20B-214ENST00000493191 IFNKQ9P0W0 207 aa22.08■■□□□ 1.13
HMG20B-214ENST00000493191 RARRES3Q9UL19 164 aa22.08■■□□□ 1.13
HMG20B-214ENST00000493191 TNRC6AQ8NDV7 1962 aaKnown RBP22.08■■□□□ 1.12
HMG20B-214ENST00000493191 UTP20O75691 2785 aaKnown RBP22.07■■□□□ 1.12
HMG20B-214ENST00000493191 A0A0A6YYK5 440 aaPredicted RBP22.07■■□□□ 1.12
HMG20B-214ENST00000493191 DNAJB5O75953 348 aa22.07■■□□□ 1.12
HMG20B-214ENST00000493191 CD97P48960 835 aa22.07■■□□□ 1.12
HMG20B-214ENST00000493191 TUBB3Q13509 450 aa22.07■■□□□ 1.12
HMG20B-214ENST00000493191 SLC14A2Q15849 920 aa22.07■■□□□ 1.12
HMG20B-214ENST00000493191 ATCAYQ86WG3 371 aa22.07■■□□□ 1.12
HMG20B-214ENST00000493191 GPR150Q8NGU9 434 aa22.07■■□□□ 1.12
HMG20B-214ENST00000493191 SLC35G2Q8TBE7 412 aa22.07■■□□□ 1.12
HMG20B-214ENST00000493191 RNF25Q96BH1 459 aaPredicted RBP22.07■■□□□ 1.12
HMG20B-214ENST00000493191 TTC25Q96NG3 672 aa22.07■■□□□ 1.12
HMG20B-214ENST00000493191 SRPK1Q96SB4 655 aaKnown RBP22.07■■□□□ 1.12
HMG20B-214ENST00000493191 RUFY1Q96T51 708 aa22.07■■□□□ 1.12
HMG20B-214ENST00000493191 AKIRIN1Q9H9L7 192 aaPredicted RBP22.07■■□□□ 1.12
HMG20B-214ENST00000493191 IL26Q9NPH9 171 aa22.07■■□□□ 1.12
HMG20B-214ENST00000493191 PSMD13Q9UNM6 376 aa22.07■■□□□ 1.12
HMG20B-214ENST00000493191 NBPF19A0A087WUL8 3843 aa22.06■■□□□ 1.12
HMG20B-214ENST00000493191 POP7O75817 140 aaKnown RBP22.06■■□□□ 1.12
HMG20B-214ENST00000493191 PDGFAP04085 211 aa22.06■■□□□ 1.12
HMG20B-214ENST00000493191 KRT1P04264 644 aa22.06■■□□□ 1.12
HMG20B-214ENST00000493191 NTRK1P04629 796 aa22.06■■□□□ 1.12
HMG20B-214ENST00000493191 TMEM253P0C7T8 217 aa22.06■■□□□ 1.12
HMG20B-214ENST00000493191 ZFXP17010 805 aaPredicted RBP22.06■■□□□ 1.12
HMG20B-214ENST00000493191 FECHP22830 423 aa22.06■■□□□ 1.12
HMG20B-214ENST00000493191 PTPN3P26045 913 aa22.06■■□□□ 1.12
HMG20B-214ENST00000493191 HNRNPH3P31942 346 aaKnown RBP22.06■■□□□ 1.12
HMG20B-214ENST00000493191 HMGCLP35914 325 aa22.06■■□□□ 1.12
HMG20B-214ENST00000493191 RPE65Q16518 533 aa22.06■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 75.6 ms