RNA–Protein interactions for RNA: ENST00000490332.2

PTPRK-213, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 5

Gene PTPRK, Length 612 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-213ENST00000490332 USP33Q8TEY7 942 aa5.04□□□□□ -1.6
PTPRK-213ENST00000490332 WDR60Q8WVS4 1066 aa5.04□□□□□ -1.6
PTPRK-213ENST00000490332 GAB3Q8WWW8 586 aa5.04□□□□□ -1.6
PTPRK-213ENST00000490332 LINC01599Q8WXQ3 324 aa5.04□□□□□ -1.6
PTPRK-213ENST00000490332 AZIN2Q96A70 460 aa5.04□□□□□ -1.6
PTPRK-213ENST00000490332 LIN37Q96GY3 246 aaPredicted RBP5.04□□□□□ -1.6
PTPRK-213ENST00000490332 PRR11Q96HE9 360 aaPredicted RBP5.04□□□□□ -1.6
PTPRK-213ENST00000490332 ELMO2Q96JJ3 720 aa5.04□□□□□ -1.6
PTPRK-213ENST00000490332 FEM1CQ96JP0 617 aa5.04□□□□□ -1.6
PTPRK-213ENST00000490332 ZNF778Q96MU6 729 aa5.04□□□□□ -1.6
PTPRK-213ENST00000490332 GPR78Q96P69 363 aa5.04□□□□□ -1.6
PTPRK-213ENST00000490332 BTBD9Q96Q07 612 aa5.04□□□□□ -1.6
PTPRK-213ENST00000490332 PANX3Q96QZ0 392 aa5.04□□□□□ -1.6
PTPRK-213ENST00000490332 TCF12Q99081 682 aa5.04□□□□□ -1.6
PTPRK-213ENST00000490332 DDX50Q9BQ39 737 aaKnown RBP5.04□□□□□ -1.6
PTPRK-213ENST00000490332 APOL2Q9BQE5 337 aa5.04□□□□□ -1.6
PTPRK-213ENST00000490332 MRPL1Q9BYD6 325 aaKnown RBP5.04□□□□□ -1.6
PTPRK-213ENST00000490332 KLHL4Q9C0H6 718 aa5.04□□□□□ -1.6
PTPRK-213ENST00000490332 FAM192AQ9GZU8 254 aa5.04□□□□□ -1.6
PTPRK-213ENST00000490332 SMOC1Q9H4F8 434 aa5.04□□□□□ -1.6
PTPRK-213ENST00000490332 SP110Q9HB58 689 aa5.04□□□□□ -1.6
PTPRK-213ENST00000490332 SYTL2Q9HCH5 934 aa5.04□□□□□ -1.6
PTPRK-213ENST00000490332 ATP13A1Q9HD20 1204 aa5.04□□□□□ -1.6
PTPRK-213ENST00000490332 TMLHEQ9NVH6 421 aa5.04□□□□□ -1.6
PTPRK-213ENST00000490332 PIH1D1Q9NWS0 290 aaKnown RBP5.04□□□□□ -1.6
PTPRK-213ENST00000490332 NMRK1Q9NWW6 199 aa5.04□□□□□ -1.6
PTPRK-213ENST00000490332 TMEM161AQ9NX61 479 aa5.04□□□□□ -1.6
PTPRK-213ENST00000490332 SPG21Q9NZD8 308 aa5.04□□□□□ -1.6
PTPRK-213ENST00000490332 UBP1Q9NZI7 540 aa5.04□□□□□ -1.6
PTPRK-213ENST00000490332 NDUFA13Q9P0J0 144 aa5.04□□□□□ -1.6
PTPRK-213ENST00000490332 C6orf203Q9P0P8 240 aaPredicted RBP5.04□□□□□ -1.6
PTPRK-213ENST00000490332 STK39Q9UEW8 545 aa5.04□□□□□ -1.6
PTPRK-213ENST00000490332 SFMBT1Q9UHJ3 866 aa5.04□□□□□ -1.6
PTPRK-213ENST00000490332 INPP5FQ9Y2H2 1132 aa5.04□□□□□ -1.6
PTPRK-213ENST00000490332 SEC23IPQ9Y6Y8 1000 aaKnown RBP5.04□□□□□ -1.6
PTPRK-213ENST00000490332 KNTC1P50748 2209 aa5.04□□□□□ -1.6
PTPRK-213ENST00000490332 MGAQ8IWI9 3026 aa5.04□□□□□ -1.6
PTPRK-213ENST00000490332 TDRD15B5MCY1 1934 aaKnown RBP5.03□□□□□ -1.6
PTPRK-213ENST00000490332 F8P00451 2351 aa5.03□□□□□ -1.6
PTPRK-213ENST00000490332 CCDC163A0A0D9SF12 145 aa5.03□□□□□ -1.6
PTPRK-213ENST00000490332 LOC100653049A0A140TA62 436 aa5.03□□□□□ -1.6
PTPRK-213ENST00000490332 SPAARA0A1B0GVQ0 90 aa5.03□□□□□ -1.6
PTPRK-213ENST00000490332 DYTNA2CJ06 578 aa5.03□□□□□ -1.6
PTPRK-213ENST00000490332 MROH6A6NGR9 719 aa5.03□□□□□ -1.6
PTPRK-213ENST00000490332 H0YJX3 145 aa5.03□□□□□ -1.6
PTPRK-213ENST00000490332 CASQ2O14958 399 aaPredicted RBP5.03□□□□□ -1.6
PTPRK-213ENST00000490332 GRID2O43424 1007 aa5.03□□□□□ -1.6
PTPRK-213ENST00000490332 MGEA5O60502 916 aa5.03□□□□□ -1.6
PTPRK-213ENST00000490332 RAMP2O60895 175 aa5.03□□□□□ -1.6
PTPRK-213ENST00000490332 RPP40O75818 363 aaKnown RBP5.03□□□□□ -1.6
PTPRK-213ENST00000490332 SMNDC1O75940 238 aaKnown RBP eCLIP5.03□□□□□ -1.6
PTPRK-213ENST00000490332 KRT34O76011 436 aa5.03□□□□□ -1.6
PTPRK-213ENST00000490332 IPO13O94829 963 aaKnown RBP5.03□□□□□ -1.6
PTPRK-213ENST00000490332 CRTAMO95727 393 aa5.03□□□□□ -1.6
PTPRK-213ENST00000490332 MT-CYBP00156 380 aaPredicted RBP5.03□□□□□ -1.6
PTPRK-213ENST00000490332 HLA-DQB2P05538 268 aa5.03□□□□□ -1.6
PTPRK-213ENST00000490332 FGF4P08620 206 aa5.03□□□□□ -1.6
PTPRK-213ENST00000490332 SLC35E2BP0CK96 405 aa5.03□□□□□ -1.6
PTPRK-213ENST00000490332 C6P13671 934 aa5.03□□□□□ -1.6
PTPRK-213ENST00000490332 ITGAXP20702 1163 aa5.03□□□□□ -1.6
PTPRK-213ENST00000490332 OGNP20774 298 aaKnown RBP5.03□□□□□ -1.6
PTPRK-213ENST00000490332 SAT1P21673 171 aa5.03□□□□□ -1.6
PTPRK-213ENST00000490332 CD9P21926 228 aa5.03□□□□□ -1.6
PTPRK-213ENST00000490332 ME2P23368 584 aa5.03□□□□□ -1.6
PTPRK-213ENST00000490332 GABRB3P28472 473 aa5.03□□□□□ -1.6
PTPRK-213ENST00000490332 ETFBP38117 255 aa5.03□□□□□ -1.6
PTPRK-213ENST00000490332 IL12RB1P42701 662 aa5.03□□□□□ -1.6
PTPRK-213ENST00000490332 OR1G1P47890 313 aa5.03□□□□□ -1.6
PTPRK-213ENST00000490332 HSPA13P48723 471 aa5.03□□□□□ -1.6
PTPRK-213ENST00000490332 TUFMP49411 452 aaKnown RBP5.03□□□□□ -1.6
PTPRK-213ENST00000490332 ACADVLP49748 655 aa5.03□□□□□ -1.6
PTPRK-213ENST00000490332 GATMP50440 423 aa5.03□□□□□ -1.6
PTPRK-213ENST00000490332 ATP4BP51164 291 aa5.03□□□□□ -1.6
PTPRK-213ENST00000490332 SESN3P58005 492 aa5.03□□□□□ -1.6
PTPRK-213ENST00000490332 ATP6V0D1P61421 351 aa5.03□□□□□ -1.6
PTPRK-213ENST00000490332 PRAMEP78395 509 aa5.03□□□□□ -1.6
PTPRK-213ENST00000490332 ACVR1Q04771 509 aa5.03□□□□□ -1.6
PTPRK-213ENST00000490332 TRAP1Q12931 704 aaKnown RBP5.03□□□□□ -1.6
PTPRK-213ENST00000490332 GPR17Q13304 367 aa5.03□□□□□ -1.6
PTPRK-213ENST00000490332 CTBP1Q13363 440 aa5.03□□□□□ -1.6
PTPRK-213ENST00000490332 MED21Q13503 144 aa5.03□□□□□ -1.6
PTPRK-213ENST00000490332 SEPT6Q14141 434 aa5.03□□□□□ -1.6
PTPRK-213ENST00000490332 MRPL58Q14197 206 aaKnown RBP5.03□□□□□ -1.6
PTPRK-213ENST00000490332 SQLEQ14534 574 aa5.03□□□□□ -1.6
PTPRK-213ENST00000490332 POLD3Q15054 466 aaPredicted RBP5.03□□□□□ -1.6
PTPRK-213ENST00000490332 UAP1L1Q3KQV9 507 aa5.03□□□□□ -1.6
PTPRK-213ENST00000490332 LSM12Q3MHD2 195 aaKnown RBP5.03□□□□□ -1.6
PTPRK-213ENST00000490332 C5orf22Q49AR2 442 aa5.03□□□□□ -1.6
PTPRK-213ENST00000490332 CTXN3Q4LDR2 81 aa5.03□□□□□ -1.6
PTPRK-213ENST00000490332 SLC9B1Q4ZJI4 515 aa5.03□□□□□ -1.6
PTPRK-213ENST00000490332 SLC39A12Q504Y0 691 aa5.03□□□□□ -1.6
PTPRK-213ENST00000490332 TRIM68Q6AZZ1 485 aa5.03□□□□□ -1.6
PTPRK-213ENST00000490332 NXNQ6DKJ4 435 aa5.03□□□□□ -1.6
PTPRK-213ENST00000490332 ZNF470Q6ECI4 717 aa5.03□□□□□ -1.6
PTPRK-213ENST00000490332 TCEAL6Q6IPX3 200 aa5.03□□□□□ -1.6
PTPRK-213ENST00000490332 ANO7Q6IWH7 933 aa5.03□□□□□ -1.6
PTPRK-213ENST00000490332 PRMT9Q6P2P2 845 aa5.03□□□□□ -1.6
PTPRK-213ENST00000490332 TMEM154Q6P9G4 183 aa5.03□□□□□ -1.6
PTPRK-213ENST00000490332 NAPRTQ6XQN6 538 aa5.03□□□□□ -1.6
PTPRK-213ENST00000490332 HACD2Q6Y1H2 254 aa5.03□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms