RNA–Protein interactions for RNA: ENST00000487215.1

SMPDL3A-202, Transcript of sphingomyelin phosphodiesterase acid like 3A, humanhuman

TSL 2

Gene SMPDL3A, Length 903 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPDL3A-202ENST00000487215 IDSP22304 550 aa19.08■□□□□ 0.64
SMPDL3A-202ENST00000487215 RPS18P62269 152 aaKnown RBP19.08■□□□□ 0.64
SMPDL3A-202ENST00000487215 KCNAB1Q14722 419 aa19.08■□□□□ 0.64
SMPDL3A-202ENST00000487215 PDK2Q15119 407 aa19.08■□□□□ 0.64
SMPDL3A-202ENST00000487215 UGT8Q16880 541 aa19.08■□□□□ 0.64
SMPDL3A-202ENST00000487215 NADK2Q4G0N4 442 aa19.08■□□□□ 0.64
SMPDL3A-202ENST00000487215 C11orf96Q7Z7L8 435 aa19.08■□□□□ 0.64
SMPDL3A-202ENST00000487215 SIDT2Q8NBJ9 832 aaKnown RBP19.08■□□□□ 0.64
SMPDL3A-202ENST00000487215 THAP4Q8WY91 577 aa19.08■□□□□ 0.64
SMPDL3A-202ENST00000487215 SEC14L1Q92503 715 aa19.08■□□□□ 0.64
SMPDL3A-202ENST00000487215 SLC41A2Q96JW4 573 aa19.08■□□□□ 0.64
SMPDL3A-202ENST00000487215 MAGEE1Q9HCI5 957 aa19.08■□□□□ 0.64
SMPDL3A-202ENST00000487215 WDR37Q9Y2I8 494 aa19.08■□□□□ 0.64
SMPDL3A-202ENST00000487215 A0A1B0GTH6 734 aa19.07■□□□□ 0.64
SMPDL3A-202ENST00000487215 RNF224P0DH78 156 aa19.07■□□□□ 0.64
SMPDL3A-202ENST00000487215 BPIP17213 487 aa19.07■□□□□ 0.64
SMPDL3A-202ENST00000487215 PTPN4P29074 926 aa19.07■□□□□ 0.64
SMPDL3A-202ENST00000487215 PGDP52209 483 aa19.07■□□□□ 0.64
SMPDL3A-202ENST00000487215 IFI35P80217 286 aaPredicted RBP19.07■□□□□ 0.64
SMPDL3A-202ENST00000487215 TYRO3Q06418 890 aa19.07■□□□□ 0.64
SMPDL3A-202ENST00000487215 CHAF1BQ13112 559 aa19.07■□□□□ 0.64
SMPDL3A-202ENST00000487215 FAM199XQ6PEV8 388 aaPredicted RBP19.07■□□□□ 0.64
SMPDL3A-202ENST00000487215 SSC4DQ8WTU2 575 aa19.07■□□□□ 0.64
SMPDL3A-202ENST00000487215 UBXN4Q92575 508 aa19.07■□□□□ 0.64
SMPDL3A-202ENST00000487215 NAP1L5Q96NT1 182 aaPredicted RBP19.07■□□□□ 0.64
SMPDL3A-202ENST00000487215 FCRL4Q96PJ5 515 aa19.07■□□□□ 0.64
SMPDL3A-202ENST00000487215 SLC25A23Q9BV35 468 aa19.07■□□□□ 0.64
SMPDL3A-202ENST00000487215 GPR87Q9BY21 358 aa19.07■□□□□ 0.64
SMPDL3A-202ENST00000487215 CEP41Q9BYV8 373 aa19.07■□□□□ 0.64
SMPDL3A-202ENST00000487215 GPR63Q9BZJ6 419 aa19.07■□□□□ 0.64
SMPDL3A-202ENST00000487215 MLXIPLQ9NP71 852 aa19.07■□□□□ 0.64
SMPDL3A-202ENST00000487215 TMPRSS11EQ9UL52 423 aa19.07■□□□□ 0.64
SMPDL3A-202ENST00000487215 MAP4K5Q9Y4K4 846 aa19.07■□□□□ 0.64
SMPDL3A-202ENST00000487215 UNC79Q9P2D8 2635 aa19.06■□□□□ 0.64
SMPDL3A-202ENST00000487215 ICE1Q9Y2F5 2266 aa19.06■□□□□ 0.64
SMPDL3A-202ENST00000487215 SEMA7AO75326 666 aa19.06■□□□□ 0.64
SMPDL3A-202ENST00000487215 SORBS2O94875 1100 aaKnown RBP19.06■□□□□ 0.64
SMPDL3A-202ENST00000487215 EBLN1P0CF75 366 aa19.06■□□□□ 0.64
SMPDL3A-202ENST00000487215 TAS2R40P59535 323 aa19.06■□□□□ 0.64
SMPDL3A-202ENST00000487215 PPIDQ08752 370 aaKnown RBP19.06■□□□□ 0.64
SMPDL3A-202ENST00000487215 IL10RAQ13651 578 aa19.06■□□□□ 0.64
SMPDL3A-202ENST00000487215 LAMB3Q13751 1172 aa19.06■□□□□ 0.64
SMPDL3A-202ENST00000487215 CERS6Q6ZMG9 384 aa19.06■□□□□ 0.64
SMPDL3A-202ENST00000487215 SYVN1Q86TM6 617 aa19.06■□□□□ 0.64
SMPDL3A-202ENST00000487215 TRAPPC5Q8IUR0 188 aa19.06■□□□□ 0.64
SMPDL3A-202ENST00000487215 MAP7D3Q8IWC1 876 aa19.06■□□□□ 0.64
SMPDL3A-202ENST00000487215 GPR150Q8NGU9 434 aa19.06■□□□□ 0.64
SMPDL3A-202ENST00000487215 ZNF830Q96NB3 372 aaPredicted RBP19.06■□□□□ 0.64
SMPDL3A-202ENST00000487215 VPS35Q96QK1 796 aa19.06■□□□□ 0.64
SMPDL3A-202ENST00000487215 PCDHGA9Q9Y5G4 932 aaKnown RBP19.06■□□□□ 0.64
SMPDL3A-202ENST00000487215 TNRC6AQ8NDV7 1962 aaKnown RBP19.05■□□□□ 0.64
SMPDL3A-202ENST00000487215 A0A087X0T9 212 aa19.05■□□□□ 0.64
SMPDL3A-202ENST00000487215 ARGFXA6NJG6 315 aa19.05■□□□□ 0.64
SMPDL3A-202ENST00000487215 SMTNL1A8MU46 457 aa19.05■□□□□ 0.64
SMPDL3A-202ENST00000487215 FAM228BP0C875 321 aa19.05■□□□□ 0.64
SMPDL3A-202ENST00000487215 VCLP18206 1134 aa19.05■□□□□ 0.64
SMPDL3A-202ENST00000487215 FECHP22830 423 aa19.05■□□□□ 0.64
SMPDL3A-202ENST00000487215 HALP42357 657 aa19.05■□□□□ 0.64
SMPDL3A-202ENST00000487215 ACY1Q03154 408 aa19.05■□□□□ 0.64
SMPDL3A-202ENST00000487215 PCSK7Q16549 785 aa19.05■□□□□ 0.64
SMPDL3A-202ENST00000487215 ANO6Q4KMQ2 910 aa19.05■□□□□ 0.64
SMPDL3A-202ENST00000487215 FIGNQ5HY92 759 aa19.05■□□□□ 0.64
SMPDL3A-202ENST00000487215 IMP4Q96G21 291 aaKnown RBP19.05■□□□□ 0.64
SMPDL3A-202ENST00000487215 ZNF514Q96K75 400 aaPredicted RBP19.05■□□□□ 0.64
SMPDL3A-202ENST00000487215 MAP3K3Q99759 626 aa19.05■□□□□ 0.64
SMPDL3A-202ENST00000487215 BPIFA3Q9BQP9 254 aa19.05■□□□□ 0.64
SMPDL3A-202ENST00000487215 FGF21Q9NSA1 209 aa19.05■□□□□ 0.64
SMPDL3A-202ENST00000487215 BZW2Q9Y6E2 419 aaKnown RBP19.05■□□□□ 0.64
SMPDL3A-202ENST00000487215 SPTBN1Q01082 2364 aaKnown RBP19.05■□□□□ 0.64
SMPDL3A-202ENST00000487215 AURKAO14965 403 aa19.04■□□□□ 0.64
SMPDL3A-202ENST00000487215 PROSCO94903 275 aa19.04■□□□□ 0.64
SMPDL3A-202ENST00000487215 CCL11P51671 97 aa19.04■□□□□ 0.64
SMPDL3A-202ENST00000487215 RPS15P62841 145 aaKnown RBP19.04■□□□□ 0.64
SMPDL3A-202ENST00000487215 CDK18Q07002 472 aa19.04■□□□□ 0.64
SMPDL3A-202ENST00000487215 TMEM115Q12893 351 aaPredicted RBP19.04■□□□□ 0.64
SMPDL3A-202ENST00000487215 ATP13A5Q4VNC0 1218 aa19.04■□□□□ 0.64
SMPDL3A-202ENST00000487215 PAPD7Q5XG87 772 aaKnown RBP19.04■□□□□ 0.64
SMPDL3A-202ENST00000487215 NT5DC3Q86UY8 548 aa19.04■□□□□ 0.64
SMPDL3A-202ENST00000487215 BPHLQ86WA6 291 aaPredicted RBP19.04■□□□□ 0.64
SMPDL3A-202ENST00000487215 TADA1Q96BN2 335 aa19.04■□□□□ 0.64
SMPDL3A-202ENST00000487215 RNF157Q96PX1 679 aa19.04■□□□□ 0.64
SMPDL3A-202ENST00000487215 ING2Q9H160 280 aa19.04■□□□□ 0.64
SMPDL3A-202ENST00000487215 ACSS2Q9NR19 701 aa19.04■□□□□ 0.64
SMPDL3A-202ENST00000487215 SPO11Q9Y5K1 396 aa19.04■□□□□ 0.64
SMPDL3A-202ENST00000487215 GTF2H3Q13889 308 aa19.03■□□□□ 0.64
SMPDL3A-202ENST00000487215 RPE65Q16518 533 aa19.03■□□□□ 0.64
SMPDL3A-202ENST00000487215 PRR30Q53SZ7 412 aaPredicted RBP19.03■□□□□ 0.64
SMPDL3A-202ENST00000487215 ALKBH5Q6P6C2 394 aaKnown RBP19.03■□□□□ 0.64
SMPDL3A-202ENST00000487215 KLHL35Q6PF15 583 aa19.03■□□□□ 0.64
SMPDL3A-202ENST00000487215 KMT5CQ86Y97 462 aa19.03■□□□□ 0.64
SMPDL3A-202ENST00000487215 PLD5Q8N7P1 536 aa19.03■□□□□ 0.64
SMPDL3A-202ENST00000487215 GDAP1Q8TB36 358 aa19.03■□□□□ 0.64
SMPDL3A-202ENST00000487215 RAPGEF5Q92565 580 aa19.03■□□□□ 0.64
SMPDL3A-202ENST00000487215 AGAP3Q96P47 875 aa19.03■□□□□ 0.64
SMPDL3A-202ENST00000487215 SLC25A51Q9H1U9 297 aa19.03■□□□□ 0.64
SMPDL3A-202ENST00000487215 BPIFA1Q9NP55 256 aa19.03■□□□□ 0.64
SMPDL3A-202ENST00000487215 CUEDC1Q9NWM3 386 aaPredicted RBP19.03■□□□□ 0.64
SMPDL3A-202ENST00000487215 FARSAQ9Y285 508 aaKnown RBP19.03■□□□□ 0.64
SMPDL3A-202ENST00000487215 NOTCH2Q04721 2471 aa19.03■□□□□ 0.64
SMPDL3A-202ENST00000487215 A1L4Q6 167 aa19.02■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms