RNA–Protein interactions for RNA: ENST00000485397.1

COL27A1-205, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 5

Gene COL27A1, Length 463 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-205ENST00000485397 NHEJ1Q9H9Q4 299 aaPredicted RBP18.9■□□□□ 0.62
COL27A1-205ENST00000485397 WASH6PQ9NQA3 447 aa18.9■□□□□ 0.62
COL27A1-205ENST00000485397 ABHD10Q9NUJ1 306 aa18.9■□□□□ 0.62
COL27A1-205ENST00000485397 DDX56Q9NY93 547 aaKnown RBP18.9■□□□□ 0.62
COL27A1-205ENST00000485397 HECTD1Q9ULT8 2610 aa18.89■□□□□ 0.62
COL27A1-205ENST00000485397 F5H423 210 aaPredicted RBP18.89■□□□□ 0.61
COL27A1-205ENST00000485397 TOX3O15405 576 aaPredicted RBP18.89■□□□□ 0.61
COL27A1-205ENST00000485397 KIAA0754O94854 1291 aa18.89■□□□□ 0.61
COL27A1-205ENST00000485397 PECAM1P16284 738 aaPredicted RBP18.89■□□□□ 0.61
COL27A1-205ENST00000485397 NFKB1P19838 968 aa18.89■□□□□ 0.61
COL27A1-205ENST00000485397 COMTP21964 271 aa18.89■□□□□ 0.61
COL27A1-205ENST00000485397 CA5AP35218 305 aa18.89■□□□□ 0.61
COL27A1-205ENST00000485397 DLSTP36957 453 aa18.89■□□□□ 0.61
COL27A1-205ENST00000485397 CHRNA4P43681 627 aa18.89■□□□□ 0.61
COL27A1-205ENST00000485397 CAPZBP47756 277 aa18.89■□□□□ 0.61
COL27A1-205ENST00000485397 WNT3AP56704 352 aa18.89■□□□□ 0.61
COL27A1-205ENST00000485397 WASHC5Q12768 1159 aa18.89■□□□□ 0.61
COL27A1-205ENST00000485397 GTF2H3Q13889 308 aa18.89■□□□□ 0.61
COL27A1-205ENST00000485397 TRIM14Q14142 442 aa18.89■□□□□ 0.61
COL27A1-205ENST00000485397 COLEC12Q5KU26 742 aa18.89■□□□□ 0.61
COL27A1-205ENST00000485397 CACHD1Q5VU97 1274 aa18.89■□□□□ 0.61
COL27A1-205ENST00000485397 IRGCQ6NXR0 463 aa18.89■□□□□ 0.61
COL27A1-205ENST00000485397 KDELC1Q6UW63 502 aa18.89■□□□□ 0.61
COL27A1-205ENST00000485397 C6orf15Q6UXA7 325 aaPredicted RBP18.89■□□□□ 0.61
COL27A1-205ENST00000485397 RASGRP3Q8IV61 690 aa18.89■□□□□ 0.61
COL27A1-205ENST00000485397 TTC30BQ8N4P2 665 aa18.89■□□□□ 0.61
COL27A1-205ENST00000485397 SLC25A41Q8N5S1 370 aa18.89■□□□□ 0.61
COL27A1-205ENST00000485397 APOBEC4Q8WW27 367 aaKnown RBP18.89■□□□□ 0.61
COL27A1-205ENST00000485397 CCDC42Q96M95 316 aa18.89■□□□□ 0.61
COL27A1-205ENST00000485397 IL26Q9NPH9 171 aa18.89■□□□□ 0.61
COL27A1-205ENST00000485397 FAM153AQ9UHL3 310 aa18.89■□□□□ 0.61
COL27A1-205ENST00000485397 CROTQ9UKG9 612 aa18.89■□□□□ 0.61
COL27A1-205ENST00000485397 LOC285095A0A1B0GVY8 99 aa18.88■□□□□ 0.61
COL27A1-205ENST00000485397 GPR39O43194 453 aa18.88■□□□□ 0.61
COL27A1-205ENST00000485397 UGT1A9O60656 530 aa18.88■□□□□ 0.61
COL27A1-205ENST00000485397 CST8O60676 142 aa18.88■□□□□ 0.61
COL27A1-205ENST00000485397 NDUFA10O95299 355 aa18.88■□□□□ 0.61
COL27A1-205ENST00000485397 UGT1A6P19224 532 aa18.88■□□□□ 0.61
COL27A1-205ENST00000485397 UGT1A1P22309 533 aa18.88■□□□□ 0.61
COL27A1-205ENST00000485397 UGT1A4P22310 534 aa18.88■□□□□ 0.61
COL27A1-205ENST00000485397 HMGCLP35914 325 aa18.88■□□□□ 0.61
COL27A1-205ENST00000485397 CDKN2BP42772 138 aa18.88■□□□□ 0.61
COL27A1-205ENST00000485397 SLC1A1P43005 524 aa18.88■□□□□ 0.61
COL27A1-205ENST00000485397 PPP1CAP62136 330 aa18.88■□□□□ 0.61
COL27A1-205ENST00000485397 CHRNA6Q15825 494 aa18.88■□□□□ 0.61
COL27A1-205ENST00000485397 SIRPB2Q5JXA9 342 aa18.88■□□□□ 0.61
COL27A1-205ENST00000485397 KAZNQ674X7 775 aa18.88■□□□□ 0.61
COL27A1-205ENST00000485397 PRSS42Q7Z5A4 293 aa18.88■□□□□ 0.61
COL27A1-205ENST00000485397 TFB1MQ8WVM0 346 aaKnown RBP18.88■□□□□ 0.61
COL27A1-205ENST00000485397 KLHL6Q8WZ60 621 aa18.88■□□□□ 0.61
COL27A1-205ENST00000485397 UGT1A7Q9HAW7 530 aa18.88■□□□□ 0.61
COL27A1-205ENST00000485397 UGT1A10Q9HAW8 530 aa18.88■□□□□ 0.61
COL27A1-205ENST00000485397 UGT1A8Q9HAW9 530 aa18.88■□□□□ 0.61
COL27A1-205ENST00000485397 CBFA2T2O43439 604 aa18.87■□□□□ 0.61
COL27A1-205ENST00000485397 BUD23O43709 281 aaKnown RBP18.87■□□□□ 0.61
COL27A1-205ENST00000485397 SPOPO43791 374 aa18.87■□□□□ 0.61
COL27A1-205ENST00000485397 SPAG6O75602 509 aa18.87■□□□□ 0.61
COL27A1-205ENST00000485397 POP7O75817 140 aaKnown RBP18.87■□□□□ 0.61
COL27A1-205ENST00000485397 VCLP18206 1134 aa18.87■□□□□ 0.61
COL27A1-205ENST00000485397 CASRP41180 1078 aa18.87■□□□□ 0.61
COL27A1-205ENST00000485397 NR2C2P49116 596 aa18.87■□□□□ 0.61
COL27A1-205ENST00000485397 CTSCP53634 463 aa18.87■□□□□ 0.61
COL27A1-205ENST00000485397 ADCY2Q08462 1091 aa18.87■□□□□ 0.61
COL27A1-205ENST00000485397 IL11RAQ14626 422 aa18.87■□□□□ 0.61
COL27A1-205ENST00000485397 IGFBP7Q16270 282 aa18.87■□□□□ 0.61
COL27A1-205ENST00000485397 TAZQ16635 292 aa18.87■□□□□ 0.61
COL27A1-205ENST00000485397 CRTC2Q53ET0 693 aaPredicted RBP18.87■□□□□ 0.61
COL27A1-205ENST00000485397 FAM151BQ6UXP7 276 aa18.87■□□□□ 0.61
COL27A1-205ENST00000485397 VSTM4Q8IW00 320 aa18.87■□□□□ 0.61
COL27A1-205ENST00000485397 RBM12BQ8IXT5 1001 aaKnown RBP18.87■□□□□ 0.61
COL27A1-205ENST00000485397 RASGEF1AQ8N9B8 481 aa18.87■□□□□ 0.61
COL27A1-205ENST00000485397 GPR150Q8NGU9 434 aa18.87■□□□□ 0.61
COL27A1-205ENST00000485397 BRSK1Q8TDC3 778 aa18.87■□□□□ 0.61
COL27A1-205ENST00000485397 STAMBPL1Q96FJ0 436 aa18.87■□□□□ 0.61
COL27A1-205ENST00000485397 ZDHHC12Q96GR4 267 aa18.87■□□□□ 0.61
COL27A1-205ENST00000485397 MRGPRX2Q96LB1 330 aa18.87■□□□□ 0.61
COL27A1-205ENST00000485397 TTC25Q96NG3 672 aa18.87■□□□□ 0.61
COL27A1-205ENST00000485397 TRABDQ9H4I3 376 aa18.87■□□□□ 0.61
COL27A1-205ENST00000485397 IL17CQ9P0M4 197 aa18.87■□□□□ 0.61
COL27A1-205ENST00000485397 EPHA6Q9UF33 1036 aa18.87■□□□□ 0.61
COL27A1-205ENST00000485397 ANAPC2Q9UJX6 822 aa18.87■□□□□ 0.61
COL27A1-205ENST00000485397 MFAP3LO75121 409 aa18.86■□□□□ 0.61
COL27A1-205ENST00000485397 KATNA1O75449 491 aa18.86■□□□□ 0.61
COL27A1-205ENST00000485397 FURINP09958 794 aa18.86■□□□□ 0.61
COL27A1-205ENST00000485397 FGF5P12034 268 aa18.86■□□□□ 0.61
COL27A1-205ENST00000485397 SPAM1P38567 509 aa18.86■□□□□ 0.61
COL27A1-205ENST00000485397 HALP42357 657 aa18.86■□□□□ 0.61
COL27A1-205ENST00000485397 TFDP2Q14188 446 aa18.86■□□□□ 0.61
COL27A1-205ENST00000485397 ERV3-1Q14264 604 aa18.86■□□□□ 0.61
COL27A1-205ENST00000485397 SPOCD1Q6ZMY3 1216 aa18.86■□□□□ 0.61
COL27A1-205ENST00000485397 FAM83HQ6ZRV2 1179 aaPredicted RBP18.86■□□□□ 0.61
COL27A1-205ENST00000485397 BZW1Q7L1Q6 419 aaKnown RBP18.86■□□□□ 0.61
COL27A1-205ENST00000485397 ZC3H18Q86VM9 953 aaKnown RBP18.86■□□□□ 0.61
COL27A1-205ENST00000485397 AMZ2Q86W34 360 aa18.86■□□□□ 0.61
COL27A1-205ENST00000485397 BLOC1S5Q8TDH9 187 aa18.86■□□□□ 0.61
COL27A1-205ENST00000485397 OXNAD1Q96HP4 312 aaPredicted RBP18.86■□□□□ 0.61
COL27A1-205ENST00000485397 KLHL8Q9P2G9 620 aaPredicted RBP18.86■□□□□ 0.61
COL27A1-205ENST00000485397 LNPEPQ9UIQ6 1025 aa18.86■□□□□ 0.61
COL27A1-205ENST00000485397 PSMD13Q9UNM6 376 aa18.86■□□□□ 0.61
COL27A1-205ENST00000485397 PCDHB3Q9Y5E6 796 aa18.86■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms