RNA–Protein interactions for RNA: ENST00000480468.1

SIK3-210, Transcript of SIK family kinase 3, humanhuman

TSL 1 (best)

Gene SIK3, Length 2,237 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIK3-210ENST00000480468 TSPY1Q01534 308 aa10.55□□□□□ -0.72
SIK3-210ENST00000480468 LAMTOR4Q0VGL1 99 aa10.55□□□□□ -0.72
SIK3-210ENST00000480468 GPR50Q13585 617 aa10.55□□□□□ -0.72
SIK3-210ENST00000480468 STARD3Q14849 445 aa10.55□□□□□ -0.72
SIK3-210ENST00000480468 ARHGAP17Q68EM7 881 aa10.55□□□□□ -0.72
SIK3-210ENST00000480468 KIAA0930Q6ICG6 404 aaPredicted RBP10.55□□□□□ -0.72
SIK3-210ENST00000480468 JADE1Q6IE81 842 aa10.55□□□□□ -0.72
SIK3-210ENST00000480468 B3GNT8Q7Z7M8 397 aa10.55□□□□□ -0.72
SIK3-210ENST00000480468 FAM131BQ86XD5 332 aa10.55□□□□□ -0.72
SIK3-210ENST00000480468 REM2Q8IYK8 340 aaPredicted RBP10.55□□□□□ -0.72
SIK3-210ENST00000480468 SLC22A15Q8IZD6 547 aa10.55□□□□□ -0.72
SIK3-210ENST00000480468 FAM109AQ8N4B1 249 aa10.55□□□□□ -0.72
SIK3-210ENST00000480468 NETO2Q8NC67 525 aa10.55□□□□□ -0.72
SIK3-210ENST00000480468 OR5K1Q8NHB7 308 aa10.55□□□□□ -0.72
SIK3-210ENST00000480468 PIK3R3Q92569 461 aa10.55□□□□□ -0.72
SIK3-210ENST00000480468 RNF170Q96K19 258 aa10.55□□□□□ -0.72
SIK3-210ENST00000480468 TEKT5Q96M29 485 aa10.55□□□□□ -0.72
SIK3-210ENST00000480468 TMEM74Q96NL1 305 aa10.55□□□□□ -0.72
SIK3-210ENST00000480468 CCDC32Q9BV29 185 aa10.55□□□□□ -0.72
SIK3-210ENST00000480468 BRINP2Q9C0B6 783 aa10.55□□□□□ -0.72
SIK3-210ENST00000480468 MKRN2Q9H000 416 aaKnown RBP10.55□□□□□ -0.72
SIK3-210ENST00000480468 CDT1Q9H211 546 aa10.55□□□□□ -0.72
SIK3-210ENST00000480468 FZD8Q9H461 694 aa10.55□□□□□ -0.72
SIK3-210ENST00000480468 RPAP3Q9H6T3 665 aaPredicted RBP10.55□□□□□ -0.72
SIK3-210ENST00000480468 GORASP2Q9H8Y8 452 aa10.55□□□□□ -0.72
SIK3-210ENST00000480468 LTB4R2Q9NPC1 389 aa10.55□□□□□ -0.72
SIK3-210ENST00000480468 AIG1Q9NVV5 245 aa10.55□□□□□ -0.72
SIK3-210ENST00000480468 FKBP14Q9NWM8 211 aa10.55□□□□□ -0.72
SIK3-210ENST00000480468 POLG2Q9UHN1 485 aa10.55□□□□□ -0.72
SIK3-210ENST00000480468 ORC6Q9Y5N6 252 aa10.55□□□□□ -0.72
SIK3-210ENST00000480468 PEX16Q9Y5Y5 336 aa10.55□□□□□ -0.72
SIK3-210ENST00000480468 UBR3Q6ZT12 1888 aa10.54□□□□□ -0.72
SIK3-210ENST00000480468 C9JVG2 144 aa10.54□□□□□ -0.72
SIK3-210ENST00000480468 RGS10O43665 173 aa10.54□□□□□ -0.72
SIK3-210ENST00000480468 CACNG3O60359 315 aa10.54□□□□□ -0.72
SIK3-210ENST00000480468 KPNA6O60684 536 aa10.54□□□□□ -0.72
SIK3-210ENST00000480468 CDK14O94921 469 aa10.54□□□□□ -0.72
SIK3-210ENST00000480468 MT-ND2P03891 347 aa10.54□□□□□ -0.72
SIK3-210ENST00000480468 ALOX12P18054 663 aa10.54□□□□□ -0.72
SIK3-210ENST00000480468 PAMP19021 973 aa10.54□□□□□ -0.72
SIK3-210ENST00000480468 GTF2E2P29084 291 aaKnown RBP10.54□□□□□ -0.72
SIK3-210ENST00000480468 EML3Q32P44 896 aa10.54□□□□□ -0.72
SIK3-210ENST00000480468 FUT11Q495W5 492 aa10.54□□□□□ -0.72
SIK3-210ENST00000480468 EEF1DP3Q658K8 133 aa10.54□□□□□ -0.72
SIK3-210ENST00000480468 SYCE2Q6PIF2 218 aa10.54□□□□□ -0.72
SIK3-210ENST00000480468 BNIPLQ7Z465 357 aa10.54□□□□□ -0.72
SIK3-210ENST00000480468 PPHLN1Q8NEY8 458 aaKnown RBP10.54□□□□□ -0.72
SIK3-210ENST00000480468 OR52E4Q8NGH9 312 aa10.54□□□□□ -0.72
SIK3-210ENST00000480468 FCGR1BQ92637 280 aa10.54□□□□□ -0.72
SIK3-210ENST00000480468 TUBGCP3Q96CW5 907 aa10.54□□□□□ -0.72
SIK3-210ENST00000480468 PDLIM5Q96HC4 596 aaKnown RBP10.54□□□□□ -0.72
SIK3-210ENST00000480468 C12orf42Q96LP6 360 aa10.54□□□□□ -0.72
SIK3-210ENST00000480468 ZFP14Q9HCL3 533 aa10.54□□□□□ -0.72
SIK3-210ENST00000480468 ACOXLQ9NUZ1 547 aa10.54□□□□□ -0.72
SIK3-210ENST00000480468 TNFSF13BQ9Y275 285 aa10.54□□□□□ -0.72
SIK3-210ENST00000480468 HMX3A6NHT5 357 aa10.54□□□□□ -0.72
SIK3-210ENST00000480468 H3BMM5 538 aa10.54□□□□□ -0.72
SIK3-210ENST00000480468 CDK2AP1O14519 115 aa10.54□□□□□ -0.72
SIK3-210ENST00000480468 SHOXO15266 292 aa10.54□□□□□ -0.72
SIK3-210ENST00000480468 NOBOXO60393 691 aa10.54□□□□□ -0.72
SIK3-210ENST00000480468 SEMA3DO95025 777 aa10.54□□□□□ -0.72
SIK3-210ENST00000480468 WISP3O95389 354 aaPredicted RBP10.54□□□□□ -0.72
SIK3-210ENST00000480468 CST1P01037 141 aa10.54□□□□□ -0.72
SIK3-210ENST00000480468 CES1P23141 567 aa10.54□□□□□ -0.72
SIK3-210ENST00000480468 FSHRP23945 695 aa10.54□□□□□ -0.72
SIK3-210ENST00000480468 HCAR3P49019 387 aa10.54□□□□□ -0.72
SIK3-210ENST00000480468 CLK1P49759 484 aaKnown RBP10.54□□□□□ -0.72
SIK3-210ENST00000480468 RBP5P82980 135 aa10.54□□□□□ -0.72
SIK3-210ENST00000480468 IL5RAQ01344 420 aa10.54□□□□□ -0.72
SIK3-210ENST00000480468 BNC1Q01954 994 aa10.54□□□□□ -0.72
SIK3-210ENST00000480468 FPGSQ05932 587 aa10.54□□□□□ -0.72
SIK3-210ENST00000480468 TARDBPQ13148 414 aaKnown RBP eCLIP10.54□□□□□ -0.72
SIK3-210ENST00000480468 DGCR6Q14129 220 aa10.54□□□□□ -0.72
SIK3-210ENST00000480468 KEAP1Q14145 624 aa10.54□□□□□ -0.72
SIK3-210ENST00000480468 TWF2Q6IBS0 349 aaKnown RBP10.54□□□□□ -0.72
SIK3-210ENST00000480468 FAM196AQ6ZSG2 479 aa10.54□□□□□ -0.72
SIK3-210ENST00000480468 NECAB2Q7Z6G3 386 aa10.54□□□□□ -0.72
SIK3-210ENST00000480468 GALNT7Q86SF2 657 aa10.54□□□□□ -0.72
SIK3-210ENST00000480468 GATAD2AQ86YP4 633 aa10.54□□□□□ -0.72
SIK3-210ENST00000480468 ADHFE1Q8IWW8 467 aa10.54□□□□□ -0.72
SIK3-210ENST00000480468 TP53INP2Q8IXH6 220 aa10.54□□□□□ -0.72
SIK3-210ENST00000480468 NATD1Q8N6N6 113 aa10.54□□□□□ -0.72
SIK3-210ENST00000480468 RNF149Q8NC42 400 aa10.54□□□□□ -0.72
SIK3-210ENST00000480468 CNIH3Q8TBE1 160 aa10.54□□□□□ -0.72
SIK3-210ENST00000480468 CLEC4CQ8WTT0 213 aa10.54□□□□□ -0.72
SIK3-210ENST00000480468 IPCEF1Q8WWN9 437 aaPredicted RBP10.54□□□□□ -0.72
SIK3-210ENST00000480468 RPL3LQ92901 407 aaKnown RBP10.54□□□□□ -0.72
SIK3-210ENST00000480468 POP5Q969H6 163 aaKnown RBP10.54□□□□□ -0.72
SIK3-210ENST00000480468 MARVELD3Q96A59 401 aa10.54□□□□□ -0.72
SIK3-210ENST00000480468 SIGLEC11Q96RL6 698 aa10.54□□□□□ -0.72
SIK3-210ENST00000480468 NUAK2Q9H093 628 aa10.54□□□□□ -0.72
SIK3-210ENST00000480468 SPON1Q9HCB6 807 aa10.54□□□□□ -0.72
SIK3-210ENST00000480468 ATP13A2Q9NQ11 1180 aa10.54□□□□□ -0.72
SIK3-210ENST00000480468 RPRD1BQ9NQG5 326 aaKnown RBP10.54□□□□□ -0.72
SIK3-210ENST00000480468 RNF146Q9NTX7 359 aa10.54□□□□□ -0.72
SIK3-210ENST00000480468 GIMAP4Q9NUV9 329 aa10.54□□□□□ -0.72
SIK3-210ENST00000480468 PAQR5Q9NXK6 330 aaPredicted RBP10.54□□□□□ -0.72
SIK3-210ENST00000480468 ZIM2Q9NZV7 527 aa10.54□□□□□ -0.72
SIK3-210ENST00000480468 GIMAP2Q9UG22 337 aa10.54□□□□□ -0.72
SIK3-210ENST00000480468 TMEFF2Q9UIK5 374 aaPredicted RBP10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms