RNA–Protein interactions for RNA: ENST00000477812.1

ACTB-210, Transcript of actin beta, humanhuman

TSL 2

Gene ACTB, Length 820 nt, Biotype retained intron, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-210ENST00000477812 TM7SF3Q9NS93 570 aa19.67■□□□□ 0.74
ACTB-210ENST00000477812 TRNAU1APQ9NX07 287 aaKnown RBP19.67■□□□□ 0.74
ACTB-210ENST00000477812 APOBEC3BQ9UH17 382 aaKnown RBP19.67■□□□□ 0.74
ACTB-210ENST00000477812 PRKAB1Q9Y478 270 aa19.67■□□□□ 0.74
ACTB-210ENST00000477812 CXorf49A8MYA2 514 aaPredicted RBP19.66■□□□□ 0.74
ACTB-210ENST00000477812 CDX4O14627 284 aaPredicted RBP19.66■□□□□ 0.74
ACTB-210ENST00000477812 PRMT5O14744 637 aaPredicted RBP19.66■□□□□ 0.74
ACTB-210ENST00000477812 SCAMP1O15126 338 aa19.66■□□□□ 0.74
ACTB-210ENST00000477812 CTIFO43310 598 aaKnown RBP19.66■□□□□ 0.74
ACTB-210ENST00000477812 PIAS1O75925 651 aa19.66■□□□□ 0.74
ACTB-210ENST00000477812 PIAS2O75928 621 aa19.66■□□□□ 0.74
ACTB-210ENST00000477812 AP2A2O94973 939 aa19.66■□□□□ 0.74
ACTB-210ENST00000477812 ACSL3O95573 720 aa19.66■□□□□ 0.74
ACTB-210ENST00000477812 TUBBP07437 444 aa19.66■□□□□ 0.74
ACTB-210ENST00000477812 RALBP11234 206 aa19.66■□□□□ 0.74
ACTB-210ENST00000477812 RPS3P23396 243 aaKnown RBP eCLIP19.66■□□□□ 0.743e-30■■□□□ 14
ACTB-210ENST00000477812 MCM3P25205 808 aa19.66■□□□□ 0.74
ACTB-210ENST00000477812 EPHA8P29322 1005 aaPredicted RBP19.66■□□□□ 0.74
ACTB-210ENST00000477812 STX2P32856 288 aa19.66■□□□□ 0.74
ACTB-210ENST00000477812 LEPRP48357 1165 aaKnown RBP19.66■□□□□ 0.74
ACTB-210ENST00000477812 ARRB1P49407 418 aaPredicted RBP19.66■□□□□ 0.74
ACTB-210ENST00000477812 PRLHRP49683 370 aa19.66■□□□□ 0.74
ACTB-210ENST00000477812 BLKP51451 505 aa19.66■□□□□ 0.74
ACTB-210ENST00000477812 HNRNPKP61978 463 aaKnown RBP eCLIP19.66■□□□□ 0.742e-7■□□□□ 8.8
ACTB-210ENST00000477812 ZNF658BQ4V348 819 aaPredicted RBP19.66■□□□□ 0.74
ACTB-210ENST00000477812 CRTC3Q6UUV7 619 aa19.66■□□□□ 0.74
ACTB-210ENST00000477812 XKR5Q6UX68 686 aa19.66■□□□□ 0.74
ACTB-210ENST00000477812 RD3Q7Z3Z2 195 aa19.66■□□□□ 0.74
ACTB-210ENST00000477812 GALNT13Q8IUC8 556 aa19.66■□□□□ 0.74
ACTB-210ENST00000477812 MINDY1Q8N5J2 469 aa19.66■□□□□ 0.74
ACTB-210ENST00000477812 ZNF548Q8NEK5 533 aaPredicted RBP19.66■□□□□ 0.74
ACTB-210ENST00000477812 FBF1Q8TES7 1133 aa19.66■□□□□ 0.74
ACTB-210ENST00000477812 ZNF514Q96K75 400 aaPredicted RBP19.66■□□□□ 0.74
ACTB-210ENST00000477812 BIRC8Q96P09 236 aa19.66■□□□□ 0.74
ACTB-210ENST00000477812 PPANQ9NQ55 473 aaKnown RBP19.66■□□□□ 0.74
ACTB-210ENST00000477812 FBXO6Q9NRD1 293 aaPredicted RBP19.66■□□□□ 0.74
ACTB-210ENST00000477812 DNAAF2Q9NVR5 837 aaKnown RBP19.66■□□□□ 0.74
ACTB-210ENST00000477812 GULP1Q9UBP9 304 aa19.66■□□□□ 0.74
ACTB-210ENST00000477812 GPR34Q9UPC5 381 aa19.66■□□□□ 0.74
ACTB-210ENST00000477812 PSAT1Q9Y617 370 aa19.66■□□□□ 0.74
ACTB-210ENST00000477812 OR2AG2A6NM03 316 aa19.65■□□□□ 0.74
ACTB-210ENST00000477812 NDUFS3O75489 264 aa19.65■□□□□ 0.74
ACTB-210ENST00000477812 TNFP01375 233 aa19.65■□□□□ 0.74
ACTB-210ENST00000477812 CELA2BP08218 269 aaPredicted RBP19.65■□□□□ 0.74
ACTB-210ENST00000477812 ABHD2P08910 425 aa19.65■□□□□ 0.74
ACTB-210ENST00000477812 ZNF7P17097 686 aaPredicted RBP19.65■□□□□ 0.74
ACTB-210ENST00000477812 PPARGP37231 505 aaPredicted RBP19.65■□□□□ 0.74
ACTB-210ENST00000477812 PMS2P54278 862 aa19.65■□□□□ 0.74
ACTB-210ENST00000477812 GTF2H3Q13889 308 aa19.65■□□□□ 0.74
ACTB-210ENST00000477812 CTSL3PQ5NE16 218 aa19.65■□□□□ 0.74
ACTB-210ENST00000477812 TMEM220Q6QAJ8 160 aa19.65■□□□□ 0.74
ACTB-210ENST00000477812 LRRTM4Q86VH4 590 aa19.65■□□□□ 0.74
ACTB-210ENST00000477812 LRRC6Q86X45 466 aa19.65■□□□□ 0.74
ACTB-210ENST00000477812 TRAPPC5Q8IUR0 188 aa19.65■□□□□ 0.74
ACTB-210ENST00000477812 BEND7Q8N7W2 519 aaPredicted RBP19.65■□□□□ 0.74
ACTB-210ENST00000477812 LINC00615Q96LM1 132 aaPredicted RBP19.65■□□□□ 0.74
ACTB-210ENST00000477812 GTPBP2Q9BX10 602 aaKnown RBP19.65■□□□□ 0.74
ACTB-210ENST00000477812 SLC13A1Q9BZW2 595 aa19.65■□□□□ 0.74
ACTB-210ENST00000477812 CLPBQ9H078 707 aa19.65■□□□□ 0.74
ACTB-210ENST00000477812 UCKL1Q9NWZ5 548 aa19.65■□□□□ 0.74
ACTB-210ENST00000477812 ZFATQ9P243 1243 aa19.65■□□□□ 0.74
ACTB-210ENST00000477812 SLC23A2Q9UGH3 650 aa19.65■□□□□ 0.74
ACTB-210ENST00000477812 RABGEF1Q9UJ41 708 aa19.65■□□□□ 0.74
ACTB-210ENST00000477812 MOSPD1Q9UJG1 213 aa19.65■□□□□ 0.74
ACTB-210ENST00000477812 H3BM21 787 aa19.64■□□□□ 0.73
ACTB-210ENST00000477812 KMOO15229 486 aa19.64■□□□□ 0.73
ACTB-210ENST00000477812 YKT6O15498 198 aa19.64■□□□□ 0.73
ACTB-210ENST00000477812 RIPK2O43353 540 aa19.64■□□□□ 0.73
ACTB-210ENST00000477812 SDC3O75056 442 aa19.64■□□□□ 0.73
ACTB-210ENST00000477812 HAUS5O94927 633 aa19.64■□□□□ 0.73
ACTB-210ENST00000477812 ZNF883P0CG24 379 aa19.64■□□□□ 0.73
ACTB-210ENST00000477812 DGKAP23743 735 aa19.64■□□□□ 0.73
ACTB-210ENST00000477812 CCT8P50990 548 aa19.64■□□□□ 0.73
ACTB-210ENST00000477812 IL9RQ01113 521 aa19.64■□□□□ 0.73
ACTB-210ENST00000477812 BNIP3Q12983 259 aa19.64■□□□□ 0.73
ACTB-210ENST00000477812 EFTUD2Q15029 972 aaKnown RBP eCLIP19.64■□□□□ 0.732e-36■■■■■ 41.3
ACTB-210ENST00000477812 KBTBD12Q3ZCT8 623 aa19.64■□□□□ 0.73
ACTB-210ENST00000477812 PRRT3Q5FWE3 981 aa19.64■□□□□ 0.73
ACTB-210ENST00000477812 ZNF549Q6P9A3 640 aa19.64■□□□□ 0.73
ACTB-210ENST00000477812 EMBQ6PCB8 327 aa19.64■□□□□ 0.73
ACTB-210ENST00000477812 SLC26A11Q86WA9 606 aa19.64■□□□□ 0.73
ACTB-210ENST00000477812 NRROSQ86YC3 692 aa19.64■□□□□ 0.73
ACTB-210ENST00000477812 SLC25A45Q8N413 288 aa19.64■□□□□ 0.73
ACTB-210ENST00000477812 CCL4L1Q8NHW4 92 aa19.64■□□□□ 0.73
ACTB-210ENST00000477812 GPBAR1Q8TDU6 330 aa19.64■□□□□ 0.73
ACTB-210ENST00000477812 SAP25Q8TEE9 199 aa19.64■□□□□ 0.73
ACTB-210ENST00000477812 CAVIN3Q969G5 261 aa19.64■□□□□ 0.73
ACTB-210ENST00000477812 TIMM29Q9BSF4 260 aa19.64■□□□□ 0.73
ACTB-210ENST00000477812 EDEM2Q9BV94 578 aa19.64■□□□□ 0.73
ACTB-210ENST00000477812 ACSS3Q9H6R3 686 aa19.64■□□□□ 0.73
ACTB-210ENST00000477812 ZNHIT2Q9UHR6 403 aa19.64■□□□□ 0.73
ACTB-210ENST00000477812 VPS9D1Q9Y2B5 631 aa19.64■□□□□ 0.73
ACTB-210ENST00000477812 PLEKHM1Q9Y4G2 1056 aa19.64■□□□□ 0.73
ACTB-210ENST00000477812 PIKFYVEQ9Y2I7 2098 aa19.64■□□□□ 0.73
ACTB-210ENST00000477812 PCDHGA12O60330 932 aa19.63■□□□□ 0.73
ACTB-210ENST00000477812 FOXD2O60548 495 aaPredicted RBP19.63■□□□□ 0.73
ACTB-210ENST00000477812 AHSGP02765 367 aa19.63■□□□□ 0.73
ACTB-210ENST00000477812 ESR1P03372 595 aa19.63■□□□□ 0.73
ACTB-210ENST00000477812 GIMD1P0DJR0 217 aa19.63■□□□□ 0.73
ACTB-210ENST00000477812 ACP5P13686 325 aa19.63■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms