RNA–Protein interactions for RNA: ENST00000477052.1

VARS2-208, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 3

Gene VARS2, Length 552 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-208ENST00000477052 CDKN2BP42772 138 aa11.46□□□□□ -0.57
VARS2-208ENST00000477052 CLCNKAP51800 687 aa11.46□□□□□ -0.57
VARS2-208ENST00000477052 CTSCP53634 463 aa11.46□□□□□ -0.57
VARS2-208ENST00000477052 WNT3AP56704 352 aa11.46□□□□□ -0.57
VARS2-208ENST00000477052 TMEM115Q12893 351 aaPredicted RBP11.46□□□□□ -0.57
VARS2-208ENST00000477052 OLIG2Q13516 323 aa11.46□□□□□ -0.57
VARS2-208ENST00000477052 KCNAB1Q14722 419 aa11.46□□□□□ -0.57
VARS2-208ENST00000477052 IRGCQ6NXR0 463 aa11.46□□□□□ -0.57
VARS2-208ENST00000477052 KDELC1Q6UW63 502 aa11.46□□□□□ -0.57
VARS2-208ENST00000477052 CERS6Q6ZMG9 384 aa11.46□□□□□ -0.57
VARS2-208ENST00000477052 FAM83HQ6ZRV2 1179 aaPredicted RBP11.46□□□□□ -0.57
VARS2-208ENST00000477052 C11orf96Q7Z7L8 435 aa11.46□□□□□ -0.57
VARS2-208ENST00000477052 VSTM4Q8IW00 320 aa11.46□□□□□ -0.57
VARS2-208ENST00000477052 RHOT1Q8IXI2 618 aa11.46□□□□□ -0.57
VARS2-208ENST00000477052 TTC30BQ8N4P2 665 aa11.46□□□□□ -0.57
VARS2-208ENST00000477052 RASGEF1AQ8N9B8 481 aa11.46□□□□□ -0.57
VARS2-208ENST00000477052 GPR150Q8NGU9 434 aa11.46□□□□□ -0.57
VARS2-208ENST00000477052 BLOC1S5Q8TDH9 187 aa11.46□□□□□ -0.57
VARS2-208ENST00000477052 COL26A1Q96A83 441 aa11.46□□□□□ -0.57
VARS2-208ENST00000477052 CXorf40BQ96DE9 158 aa11.46□□□□□ -0.57
VARS2-208ENST00000477052 OXNAD1Q96HP4 312 aaPredicted RBP11.46□□□□□ -0.57
VARS2-208ENST00000477052 TEKT5Q96M29 485 aa11.46□□□□□ -0.57
VARS2-208ENST00000477052 EPN3Q9H201 632 aa11.46□□□□□ -0.57
VARS2-208ENST00000477052 SLC40A1Q9NP59 571 aa11.46□□□□□ -0.57
VARS2-208ENST00000477052 IL26Q9NPH9 171 aa11.46□□□□□ -0.57
VARS2-208ENST00000477052 FAM8A1Q9UBU6 413 aa11.46□□□□□ -0.57
VARS2-208ENST00000477052 CROTQ9UKG9 612 aa11.46□□□□□ -0.57
VARS2-208ENST00000477052 TMEM184BQ9Y519 407 aaPredicted RBP11.46□□□□□ -0.57
VARS2-208ENST00000477052 CFAP20Q9Y6A4 193 aaKnown RBP11.46□□□□□ -0.57
VARS2-208ENST00000477052 RPS6KL1Q9Y6S9 549 aa11.46□□□□□ -0.57
VARS2-208ENST00000477052 UBR5O95071 2799 aaPredicted RBP11.45□□□□□ -0.58
VARS2-208ENST00000477052 ZNF106Q9H2Y7 1883 aaKnown RBP11.45□□□□□ -0.58
VARS2-208ENST00000477052 OR2AG2A6NM03 316 aa11.45□□□□□ -0.58
VARS2-208ENST00000477052 ZNF487B1APH4 448 aa11.45□□□□□ -0.58
VARS2-208ENST00000477052 DDX3YO15523 660 aaKnown RBP11.45□□□□□ -0.58
VARS2-208ENST00000477052 VEGFDO43915 354 aa11.45□□□□□ -0.58
VARS2-208ENST00000477052 KATNA1O75449 491 aa11.45□□□□□ -0.58
VARS2-208ENST00000477052 TIAF1O95411 115 aa11.45□□□□□ -0.58
VARS2-208ENST00000477052 TPM3P06753 285 aa11.45□□□□□ -0.58
VARS2-208ENST00000477052 ZFXP17010 805 aaPredicted RBP11.45□□□□□ -0.58
VARS2-208ENST00000477052 IDSP22304 550 aa11.45□□□□□ -0.58
VARS2-208ENST00000477052 DLSTP36957 453 aa11.45□□□□□ -0.58
VARS2-208ENST00000477052 STAT5AP42229 794 aa11.45□□□□□ -0.58
VARS2-208ENST00000477052 ABHD18Q0P651 414 aa11.45□□□□□ -0.58
VARS2-208ENST00000477052 ERV3-1Q14264 604 aa11.45□□□□□ -0.58
VARS2-208ENST00000477052 CACHD1Q5VU97 1274 aa11.45□□□□□ -0.58
VARS2-208ENST00000477052 CCDC70Q6NSX1 233 aa11.45□□□□□ -0.58
VARS2-208ENST00000477052 DUS1LQ6P1R4 473 aaKnown RBP11.45□□□□□ -0.58
VARS2-208ENST00000477052 SPOCD1Q6ZMY3 1216 aa11.45□□□□□ -0.58
VARS2-208ENST00000477052 DET1Q7L5Y6 550 aa11.45□□□□□ -0.58
VARS2-208ENST00000477052 RASGRP3Q8IV61 690 aa11.45□□□□□ -0.58
VARS2-208ENST00000477052 RHOT2Q8IXI1 618 aa11.45□□□□□ -0.58
VARS2-208ENST00000477052 ZNF567Q8N184 647 aa11.45□□□□□ -0.58
VARS2-208ENST00000477052 BEND7Q8N7W2 519 aaPredicted RBP11.45□□□□□ -0.58
VARS2-208ENST00000477052 IPMKQ8NFU5 416 aa11.45□□□□□ -0.58
VARS2-208ENST00000477052 TFB1MQ8WVM0 346 aaKnown RBP11.45□□□□□ -0.58
VARS2-208ENST00000477052 ABHD17AQ96GS6 310 aa11.45□□□□□ -0.58
VARS2-208ENST00000477052 MRGPRX2Q96LB1 330 aa11.45□□□□□ -0.58
VARS2-208ENST00000477052 RUFY1Q96T51 708 aa11.45□□□□□ -0.58
VARS2-208ENST00000477052 TIMM29Q9BSF4 260 aa11.45□□□□□ -0.58
VARS2-208ENST00000477052 HEMGNQ9BXL5 484 aa11.45□□□□□ -0.58
VARS2-208ENST00000477052 AKIRIN1Q9H9L7 192 aaPredicted RBP11.45□□□□□ -0.58
VARS2-208ENST00000477052 KLHL8Q9P2G9 620 aaPredicted RBP11.45□□□□□ -0.58
VARS2-208ENST00000477052 FAM153AQ9UHL3 310 aa11.45□□□□□ -0.58
VARS2-208ENST00000477052 LCMT1Q9UIC8 334 aa11.45□□□□□ -0.58
VARS2-208ENST00000477052 LNPEPQ9UIQ6 1025 aa11.45□□□□□ -0.58
VARS2-208ENST00000477052 COL12A1Q99715 3063 aa11.45□□□□□ -0.58
VARS2-208ENST00000477052 IGHV5-51A0A0C4DH38 117 aa11.44□□□□□ -0.58
VARS2-208ENST00000477052 LOC285095A0A1B0GVY8 99 aa11.44□□□□□ -0.58
VARS2-208ENST00000477052 GAPDHSO14556 408 aaPredicted RBP11.44□□□□□ -0.58
VARS2-208ENST00000477052 POP7O75817 140 aaKnown RBP11.44□□□□□ -0.58
VARS2-208ENST00000477052 NDUFA10O95299 355 aa11.44□□□□□ -0.58
VARS2-208ENST00000477052 AGTP01019 485 aa11.44□□□□□ -0.58
VARS2-208ENST00000477052 ANKRD34CP0C6C1 535 aa11.44□□□□□ -0.58
VARS2-208ENST00000477052 TCN2P20062 427 aa11.44□□□□□ -0.58
VARS2-208ENST00000477052 ARCN1P48444 511 aaKnown RBP11.44□□□□□ -0.58
VARS2-208ENST00000477052 GTF2H3Q13889 308 aa11.44□□□□□ -0.58
VARS2-208ENST00000477052 TRIM14Q14142 442 aa11.44□□□□□ -0.58
VARS2-208ENST00000477052 NFE2L1Q14494 772 aa11.44□□□□□ -0.58
VARS2-208ENST00000477052 PPP2R5EQ16537 467 aa11.44□□□□□ -0.58
VARS2-208ENST00000477052 LRRC38Q5VT99 294 aa11.44□□□□□ -0.58
VARS2-208ENST00000477052 PDPK2PQ6A1A2 396 aa11.44□□□□□ -0.58
VARS2-208ENST00000477052 FBXO38Q6PIJ6 1188 aa11.44□□□□□ -0.58
VARS2-208ENST00000477052 TMEM220Q6QAJ8 160 aa11.44□□□□□ -0.58
VARS2-208ENST00000477052 ABRAXAS1Q6UWZ7 409 aa11.44□□□□□ -0.58
VARS2-208ENST00000477052 C6orf15Q6UXA7 325 aaPredicted RBP11.44□□□□□ -0.58
VARS2-208ENST00000477052 PID1Q7Z2X4 250 aa11.44□□□□□ -0.58
VARS2-208ENST00000477052 C9orf43Q8TAL5 461 aaPredicted RBP11.44□□□□□ -0.58
VARS2-208ENST00000477052 TTC25Q96NG3 672 aa11.44□□□□□ -0.58
VARS2-208ENST00000477052 FAM118BQ9BPY3 351 aa11.44□□□□□ -0.58
VARS2-208ENST00000477052 APOL2Q9BQE5 337 aa11.44□□□□□ -0.58
VARS2-208ENST00000477052 ZPBPQ9BS86 351 aa11.44□□□□□ -0.58
VARS2-208ENST00000477052 ADNPQ9H2P0 1102 aa11.44□□□□□ -0.58
VARS2-208ENST00000477052 TSPY26PQ9H489 355 aa11.44□□□□□ -0.58
VARS2-208ENST00000477052 EPB41L1Q9H4G0 881 aa11.44□□□□□ -0.58
VARS2-208ENST00000477052 ZNF768Q9H5H4 540 aaKnown RBP11.44□□□□□ -0.58
VARS2-208ENST00000477052 UCK1Q9HA47 277 aa11.44□□□□□ -0.58
VARS2-208ENST00000477052 RAD18Q9NS91 495 aa11.44□□□□□ -0.58
VARS2-208ENST00000477052 DDX56Q9NY93 547 aaKnown RBP11.44□□□□□ -0.58
VARS2-208ENST00000477052 IL17CQ9P0M4 197 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms