RNA–Protein interactions for RNA: ENST00000474042.5

COPS7B-219, Transcript of COP9 signalosome subunit 7B, humanhuman

TSL 3

Gene COPS7B, Length 914 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7B-219ENST00000474042 KIAA0754O94854 1291 aa13.14□□□□□ -0.31
COPS7B-219ENST00000474042 NDUFA10O95299 355 aa13.14□□□□□ -0.31
COPS7B-219ENST00000474042 FURINP09958 794 aa13.14□□□□□ -0.31
COPS7B-219ENST00000474042 NELFEP18615 380 aaKnown RBP13.14□□□□□ -0.31
COPS7B-219ENST00000474042 IDSP22304 550 aa13.14□□□□□ -0.31
COPS7B-219ENST00000474042 PTPN3P26045 913 aa13.14□□□□□ -0.31
COPS7B-219ENST00000474042 RPL10P27635 214 aaKnown RBP13.14□□□□□ -0.31
COPS7B-219ENST00000474042 CD68P34810 354 aaPredicted RBP13.14□□□□□ -0.31
COPS7B-219ENST00000474042 HMGCLP35914 325 aa13.14□□□□□ -0.31
COPS7B-219ENST00000474042 ARHGAP25P42331 645 aa13.14□□□□□ -0.31
COPS7B-219ENST00000474042 SEPHS1P49903 392 aa13.14□□□□□ -0.31
COPS7B-219ENST00000474042 DRG2P55039 364 aaKnown RBP13.14□□□□□ -0.31
COPS7B-219ENST00000474042 SEPT6Q14141 434 aa13.14□□□□□ -0.31
COPS7B-219ENST00000474042 NOMO1Q15155 1222 aa13.14□□□□□ -0.31
COPS7B-219ENST00000474042 TAZQ16635 292 aa13.14□□□□□ -0.31
COPS7B-219ENST00000474042 LARP7Q4G0J3 582 aaKnown RBP eCLIP13.14□□□□□ -0.31
COPS7B-219ENST00000474042 KDELC1Q6UW63 502 aa13.14□□□□□ -0.31
COPS7B-219ENST00000474042 B4GALNT4Q76KP1 1039 aa13.14□□□□□ -0.31
COPS7B-219ENST00000474042 TRAPPC5Q8IUR0 188 aa13.14□□□□□ -0.31
COPS7B-219ENST00000474042 GPR150Q8NGU9 434 aa13.14□□□□□ -0.31
COPS7B-219ENST00000474042 SLC35G2Q8TBE7 412 aa13.14□□□□□ -0.31
COPS7B-219ENST00000474042 DTX3LQ8TDB6 740 aa13.14□□□□□ -0.31
COPS7B-219ENST00000474042 CXorf40BQ96DE9 158 aa13.14□□□□□ -0.31
COPS7B-219ENST00000474042 RNF31Q96EP0 1072 aa13.14□□□□□ -0.31
COPS7B-219ENST00000474042 STAMBPL1Q96FJ0 436 aa13.14□□□□□ -0.31
COPS7B-219ENST00000474042 TEKT5Q96M29 485 aa13.14□□□□□ -0.31
COPS7B-219ENST00000474042 TRABDQ9H4I3 376 aa13.14□□□□□ -0.31
COPS7B-219ENST00000474042 ANKMY1Q9P2S6 941 aa13.14□□□□□ -0.31
COPS7B-219ENST00000474042 WDR37Q9Y2I8 494 aa13.14□□□□□ -0.31
COPS7B-219ENST00000474042 PCDHGA6Q9Y5G7 932 aa13.14□□□□□ -0.31
COPS7B-219ENST00000474042 COL12A1Q99715 3063 aa13.14□□□□□ -0.31
COPS7B-219ENST00000474042 LOC285095A0A1B0GVY8 99 aa13.13□□□□□ -0.31
COPS7B-219ENST00000474042 KCNJ13O60928 360 aa13.13□□□□□ -0.31
COPS7B-219ENST00000474042 PMPCBO75439 489 aa13.13□□□□□ -0.31
COPS7B-219ENST00000474042 SPAG6O75602 509 aa13.13□□□□□ -0.31
COPS7B-219ENST00000474042 TIAF1O95411 115 aa13.13□□□□□ -0.31
COPS7B-219ENST00000474042 RECKO95980 971 aa13.13□□□□□ -0.31
COPS7B-219ENST00000474042 VCLP18206 1134 aa13.13□□□□□ -0.31
COPS7B-219ENST00000474042 FECHP22830 423 aa13.13□□□□□ -0.31
COPS7B-219ENST00000474042 PPP1CAP62136 330 aa13.13□□□□□ -0.31
COPS7B-219ENST00000474042 DYNLT1P63172 113 aa13.13□□□□□ -0.31
COPS7B-219ENST00000474042 WASHC5Q12768 1159 aa13.13□□□□□ -0.31
COPS7B-219ENST00000474042 TMEM115Q12893 351 aaPredicted RBP13.13□□□□□ -0.31
COPS7B-219ENST00000474042 GTF2H3Q13889 308 aa13.13□□□□□ -0.31
COPS7B-219ENST00000474042 TRIM14Q14142 442 aa13.13□□□□□ -0.31
COPS7B-219ENST00000474042 IGFBP7Q16270 282 aa13.13□□□□□ -0.31
COPS7B-219ENST00000474042 CACHD1Q5VU97 1274 aa13.13□□□□□ -0.31
COPS7B-219ENST00000474042 MFSD7Q6UXD7 560 aa13.13□□□□□ -0.31
COPS7B-219ENST00000474042 FAM92BQ6ZTR7 304 aa13.13□□□□□ -0.31
COPS7B-219ENST00000474042 RFX6Q8HWS3 928 aa13.13□□□□□ -0.31
COPS7B-219ENST00000474042 RASGRP3Q8IV61 690 aa13.13□□□□□ -0.31
COPS7B-219ENST00000474042 RHOT2Q8IXI1 618 aa13.13□□□□□ -0.31
COPS7B-219ENST00000474042 ZDHHC12Q96GR4 267 aa13.13□□□□□ -0.31
COPS7B-219ENST00000474042 SLC41A2Q96JW4 573 aa13.13□□□□□ -0.31
COPS7B-219ENST00000474042 MAK16Q9BXY0 300 aaKnown RBP13.13□□□□□ -0.31
COPS7B-219ENST00000474042 DEF6Q9H4E7 631 aa13.13□□□□□ -0.31
COPS7B-219ENST00000474042 BPIFA1Q9NP55 256 aa13.13□□□□□ -0.31
COPS7B-219ENST00000474042 IL26Q9NPH9 171 aa13.13□□□□□ -0.31
COPS7B-219ENST00000474042 LNPEPQ9UIQ6 1025 aa13.13□□□□□ -0.31
COPS7B-219ENST00000474042 KCND3Q9UK17 655 aa13.13□□□□□ -0.31
COPS7B-219ENST00000474042 POLHQ9Y253 713 aa13.13□□□□□ -0.31
COPS7B-219ENST00000474042 PCDHB3Q9Y5E6 796 aa13.13□□□□□ -0.31
COPS7B-219ENST00000474042 GPR39O43194 453 aa13.12□□□□□ -0.31
COPS7B-219ENST00000474042 EPOP01588 193 aa13.12□□□□□ -0.31
COPS7B-219ENST00000474042 PECAM1P16284 738 aaPredicted RBP13.12□□□□□ -0.31
COPS7B-219ENST00000474042 NFKB1P19838 968 aa13.12□□□□□ -0.31
COPS7B-219ENST00000474042 NR1D1P20393 614 aa13.12□□□□□ -0.31
COPS7B-219ENST00000474042 SPAM1P38567 509 aa13.12□□□□□ -0.31
COPS7B-219ENST00000474042 HALP42357 657 aa13.12□□□□□ -0.31
COPS7B-219ENST00000474042 CDKN2BP42772 138 aa13.12□□□□□ -0.31
COPS7B-219ENST00000474042 NR2C2P49116 596 aa13.12□□□□□ -0.31
COPS7B-219ENST00000474042 CTSCP53634 463 aa13.12□□□□□ -0.31
COPS7B-219ENST00000474042 PMS2P54278 862 aa13.12□□□□□ -0.31
COPS7B-219ENST00000474042 WNT3AP56704 352 aa13.12□□□□□ -0.31
COPS7B-219ENST00000474042 KLRB1Q12918 225 aa13.12□□□□□ -0.31
COPS7B-219ENST00000474042 DNASE1L3Q13609 305 aa13.12□□□□□ -0.31
COPS7B-219ENST00000474042 UBAP2LQ14157 1087 aaKnown RBP13.12□□□□□ -0.31
COPS7B-219ENST00000474042 ZDHHC20Q5W0Z9 365 aa13.12□□□□□ -0.31
COPS7B-219ENST00000474042 CCDC70Q6NSX1 233 aa13.12□□□□□ -0.31
COPS7B-219ENST00000474042 TCTN3Q6NUS6 607 aa13.12□□□□□ -0.31
COPS7B-219ENST00000474042 IRGCQ6NXR0 463 aa13.12□□□□□ -0.31
COPS7B-219ENST00000474042 CYB5D1Q6P9G0 228 aa13.12□□□□□ -0.31
COPS7B-219ENST00000474042 PPP1R3BQ86XI6 285 aa13.12□□□□□ -0.31
COPS7B-219ENST00000474042 RHOT1Q8IXI2 618 aa13.12□□□□□ -0.31
COPS7B-219ENST00000474042 DDHD1Q8NEL9 900 aa13.12□□□□□ -0.31
COPS7B-219ENST00000474042 OR8K1Q8NGG5 319 aa13.12□□□□□ -0.31
COPS7B-219ENST00000474042 BRSK1Q8TDC3 778 aa13.12□□□□□ -0.31
COPS7B-219ENST00000474042 CT55Q8WUE5 264 aa13.12□□□□□ -0.31
COPS7B-219ENST00000474042 UBXN4Q92575 508 aa13.12□□□□□ -0.31
COPS7B-219ENST00000474042 RNF25Q96BH1 459 aaPredicted RBP13.12□□□□□ -0.31
COPS7B-219ENST00000474042 ELMO2Q96JJ3 720 aa13.12□□□□□ -0.31
COPS7B-219ENST00000474042 ZCCHC2Q9C0B9 1178 aaKnown RBP13.12□□□□□ -0.31
COPS7B-219ENST00000474042 SPTLC3Q9NUV7 552 aa13.12□□□□□ -0.31
COPS7B-219ENST00000474042 SMOXQ9NWM0 555 aa13.12□□□□□ -0.31
COPS7B-219ENST00000474042 DDX56Q9NY93 547 aaKnown RBP13.12□□□□□ -0.31
COPS7B-219ENST00000474042 UBP1Q9NZI7 540 aa13.12□□□□□ -0.31
COPS7B-219ENST00000474042 IL17CQ9P0M4 197 aa13.12□□□□□ -0.31
COPS7B-219ENST00000474042 FAM153AQ9UHL3 310 aa13.12□□□□□ -0.31
COPS7B-219ENST00000474042 IGHV5-51A0A0C4DH38 117 aa13.11□□□□□ -0.31
COPS7B-219ENST00000474042 C21orf140B9A014 251 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms