RNA–Protein interactions for RNA: ENST00000464938.1

NUCKS1-202, Transcript of nuclear casein kinase and cyclin dependent kinase substrate 1, humanhuman

TSL 2

Gene NUCKS1, Length 228 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUCKS1-202ENST00000464938 UTP15Q8TED0 518 aaKnown RBP1.86□□□□□ -2.11
NUCKS1-202ENST00000464938 SLC20A1Q8WUM9 679 aa1.86□□□□□ -2.11
NUCKS1-202ENST00000464938 NUDCD2Q8WVJ2 157 aa1.86□□□□□ -2.11
NUCKS1-202ENST00000464938 SLC44A1Q8WWI5 657 aa1.86□□□□□ -2.11
NUCKS1-202ENST00000464938 DNAAF4Q8WXU2 420 aa1.86□□□□□ -2.11
NUCKS1-202ENST00000464938 FIG4Q92562 907 aa1.86□□□□□ -2.11
NUCKS1-202ENST00000464938 MOAP1Q96BY2 351 aa1.86□□□□□ -2.11
NUCKS1-202ENST00000464938 RTP4Q96DX8 246 aa1.86□□□□□ -2.11
NUCKS1-202ENST00000464938 OR1F2PQ96R84 312 aa1.86□□□□□ -2.11
NUCKS1-202ENST00000464938 NUDCD1Q96RS6 583 aa1.86□□□□□ -2.11
NUCKS1-202ENST00000464938 PAFAH2Q99487 392 aa1.86□□□□□ -2.11
NUCKS1-202ENST00000464938 MEIS3Q99687 375 aa1.86□□□□□ -2.11
NUCKS1-202ENST00000464938 ZPBPQ9BS86 351 aa1.86□□□□□ -2.11
NUCKS1-202ENST00000464938 GPR88Q9GZN0 384 aa1.86□□□□□ -2.11
NUCKS1-202ENST00000464938 SLCO5A1Q9H2Y9 848 aa1.86□□□□□ -2.11
NUCKS1-202ENST00000464938 KLHL9Q9P2J3 617 aa1.86□□□□□ -2.11
NUCKS1-202ENST00000464938 LARSQ9P2J5 1176 aaKnown RBP1.86□□□□□ -2.11
NUCKS1-202ENST00000464938 CHORDC1Q9UHD1 332 aaPredicted RBP1.86□□□□□ -2.11
NUCKS1-202ENST00000464938 ANAPC2Q9UJX6 822 aa1.86□□□□□ -2.11
NUCKS1-202ENST00000464938 ZNF148Q9UQR1 794 aa1.86□□□□□ -2.11
NUCKS1-202ENST00000464938 DLGAP4Q9Y2H0 992 aa1.86□□□□□ -2.11
NUCKS1-202ENST00000464938 KLHL20Q9Y2M5 609 aa1.86□□□□□ -2.11
NUCKS1-202ENST00000464938 AMDHD2Q9Y303 409 aa1.86□□□□□ -2.11
NUCKS1-202ENST00000464938 FAM169AQ9Y6X4 670 aa1.86□□□□□ -2.11
NUCKS1-202ENST00000464938 IGHV4OR15-8A0A075B7B6 117 aa1.85□□□□□ -2.11
NUCKS1-202ENST00000464938 A8MV72 311 aaPredicted RBP1.85□□□□□ -2.11
NUCKS1-202ENST00000464938 H3BQ06 376 aaPredicted RBP1.85□□□□□ -2.11
NUCKS1-202ENST00000464938 TULP2O00295 520 aa1.85□□□□□ -2.11
NUCKS1-202ENST00000464938 TO15178 435 aa1.85□□□□□ -2.11
NUCKS1-202ENST00000464938 TBX10O75333 385 aa1.85□□□□□ -2.11
NUCKS1-202ENST00000464938 ZBTB11O95625 1053 aaPredicted RBP1.85□□□□□ -2.11
NUCKS1-202ENST00000464938 DNTTP04053 509 aa1.85□□□□□ -2.11
NUCKS1-202ENST00000464938 DANCRP0C864 163 aa1.85□□□□□ -2.11
NUCKS1-202ENST00000464938 FAM106CPP0CH98 169 aa1.85□□□□□ -2.11
NUCKS1-202ENST00000464938 SNHG28P0DPA3 235 aa1.85□□□□□ -2.11
NUCKS1-202ENST00000464938 ITGA2P17301 1181 aa1.85□□□□□ -2.11
NUCKS1-202ENST00000464938 NMBRP28336 390 aa1.85□□□□□ -2.11
NUCKS1-202ENST00000464938 CCKARP32238 428 aa1.85□□□□□ -2.11
NUCKS1-202ENST00000464938 USP8P40818 1118 aa1.85□□□□□ -2.11
NUCKS1-202ENST00000464938 ARSEP51690 589 aa1.85□□□□□ -2.11
NUCKS1-202ENST00000464938 PPP5CP53041 499 aa1.85□□□□□ -2.11
NUCKS1-202ENST00000464938 EEF1A1P68104 462 aaKnown RBP1.85□□□□□ -2.11
NUCKS1-202ENST00000464938 TMF1P82094 1093 aa1.85□□□□□ -2.11
NUCKS1-202ENST00000464938 RELQ04864 619 aaPredicted RBP1.85□□□□□ -2.11
NUCKS1-202ENST00000464938 TROAPQ12815 778 aa1.85□□□□□ -2.11
NUCKS1-202ENST00000464938 ZBTB17Q13105 803 aa1.85□□□□□ -2.11
NUCKS1-202ENST00000464938 FHL1Q13642 323 aa1.85□□□□□ -2.11
NUCKS1-202ENST00000464938 GTF2H2Q13888 395 aa1.85□□□□□ -2.11
NUCKS1-202ENST00000464938 SF3B4Q15427 424 aaKnown RBP eCLIP1.85□□□□□ -2.11
NUCKS1-202ENST00000464938 MEP1AQ16819 746 aa1.85□□□□□ -2.11
NUCKS1-202ENST00000464938 CRY2Q49AN0 593 aa1.85□□□□□ -2.11
NUCKS1-202ENST00000464938 CBWD6Q4V339 395 aa1.85□□□□□ -2.11
NUCKS1-202ENST00000464938 BMP2KLQ5H9B9 411 aa1.85□□□□□ -2.11
NUCKS1-202ENST00000464938 CBWD3Q5JTY5 395 aa1.85□□□□□ -2.11
NUCKS1-202ENST00000464938 EEF1A1P5Q5VTE0 462 aa1.85□□□□□ -2.11
NUCKS1-202ENST00000464938 GPR139Q6DWJ6 353 aa1.85□□□□□ -2.11
NUCKS1-202ENST00000464938 DHRS7BQ6IAN0 325 aaPredicted RBP1.85□□□□□ -2.11
NUCKS1-202ENST00000464938 GTF2H2CQ6P1K8 395 aa1.85□□□□□ -2.11
NUCKS1-202ENST00000464938 FAM198BQ6UWH4 519 aa1.85□□□□□ -2.11
NUCKS1-202ENST00000464938 PRSS57Q6UWY2 283 aa1.85□□□□□ -2.11
NUCKS1-202ENST00000464938 LINGO4Q6UY18 593 aa1.85□□□□□ -2.11
NUCKS1-202ENST00000464938 LIN28BQ6ZN17 250 aaKnown RBP eCLIP1.85□□□□□ -2.11
NUCKS1-202ENST00000464938 ZNF704Q6ZNC4 412 aaPredicted RBP1.85□□□□□ -2.11
NUCKS1-202ENST00000464938 INTS8Q75QN2 995 aaKnown RBP1.85□□□□□ -2.11
NUCKS1-202ENST00000464938 MEPCEQ7L2J0 689 aaKnown RBP1.85□□□□□ -2.11
NUCKS1-202ENST00000464938 PLPPR4Q7Z2D5 763 aa1.85□□□□□ -2.11
NUCKS1-202ENST00000464938 CCDC190Q86UF4 302 aa1.85□□□□□ -2.11
NUCKS1-202ENST00000464938 GPR180Q86V85 440 aa1.85□□□□□ -2.11
NUCKS1-202ENST00000464938 MAP7D3Q8IWC1 876 aa1.85□□□□□ -2.11
NUCKS1-202ENST00000464938 ODF3L1Q8IXM7 274 aa1.85□□□□□ -2.11
NUCKS1-202ENST00000464938 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP1.85□□□□□ -2.11
NUCKS1-202ENST00000464938 AVL9Q8NBF6 648 aa1.85□□□□□ -2.11
NUCKS1-202ENST00000464938 POGLUT1Q8NBL1 392 aa1.85□□□□□ -2.11
NUCKS1-202ENST00000464938 PAPD5Q8NDF8 572 aaKnown RBP1.85□□□□□ -2.11
NUCKS1-202ENST00000464938 LMO3Q8TAP4 145 aa1.85□□□□□ -2.11
NUCKS1-202ENST00000464938 GSDMBQ8TAX9 411 aa1.85□□□□□ -2.11
NUCKS1-202ENST00000464938 SORCS1Q8WY21 1168 aa1.85□□□□□ -2.11
NUCKS1-202ENST00000464938 MTBPQ96DY7 904 aa1.85□□□□□ -2.11
NUCKS1-202ENST00000464938 ERLEC1Q96DZ1 483 aa1.85□□□□□ -2.11
NUCKS1-202ENST00000464938 CDCA5Q96FF9 252 aa1.85□□□□□ -2.11
NUCKS1-202ENST00000464938 PGAP3Q96FM1 320 aaPredicted RBP1.85□□□□□ -2.11
NUCKS1-202ENST00000464938 TMEM19Q96HH6 336 aa1.85□□□□□ -2.11
NUCKS1-202ENST00000464938 FAM84BQ96KN1 310 aaPredicted RBP1.85□□□□□ -2.11
NUCKS1-202ENST00000464938 TTC14Q96N46 770 aa1.85□□□□□ -2.11
NUCKS1-202ENST00000464938 DGAT2Q96PD7 388 aa1.85□□□□□ -2.11
NUCKS1-202ENST00000464938 DUX5Q96PT3 197 aa1.85□□□□□ -2.11
NUCKS1-202ENST00000464938 NEK1Q96PY6 1258 aa1.85□□□□□ -2.11
NUCKS1-202ENST00000464938 CDRT15Q96T59 188 aa1.85□□□□□ -2.11
NUCKS1-202ENST00000464938 DDOQ99489 341 aa1.85□□□□□ -2.11
NUCKS1-202ENST00000464938 PKP4Q99569 1192 aa1.85□□□□□ -2.11
NUCKS1-202ENST00000464938 SEMA3CQ99985 751 aa1.85□□□□□ -2.11
NUCKS1-202ENST00000464938 C16orf70Q9BSU1 422 aa1.85□□□□□ -2.11
NUCKS1-202ENST00000464938 SYT17Q9BSW7 474 aa1.85□□□□□ -2.11
NUCKS1-202ENST00000464938 HGH1Q9BTY7 390 aa1.85□□□□□ -2.11
NUCKS1-202ENST00000464938 RTN4RQ9BZR6 473 aa1.85□□□□□ -2.11
NUCKS1-202ENST00000464938 TM6SF1Q9BZW5 370 aa1.85□□□□□ -2.11
NUCKS1-202ENST00000464938 CSTL1Q9H114 145 aa1.85□□□□□ -2.11
NUCKS1-202ENST00000464938 HIPK2Q9H2X6 1198 aa1.85□□□□□ -2.11
NUCKS1-202ENST00000464938 RAD21L1Q9H4I0 556 aa1.85□□□□□ -2.11
NUCKS1-202ENST00000464938 TCP11L1Q9NUJ3 509 aa1.85□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms