RNA–Protein interactions for RNA: ENST00000456367.5

PCDH9-203, Transcript of protocadherin 9, humanhuman

TSL 1 (best) BASIC

Gene PCDH9, Length 5,072 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-203ENST00000456367 FGF3P11487 239 aaPredicted RBP4.96□□□□□ -1.62
PCDH9-203ENST00000456367 CYP3A5P20815 502 aa4.96□□□□□ -1.62
PCDH9-203ENST00000456367 TCEA1P23193 301 aaKnown RBP4.96□□□□□ -1.62
PCDH9-203ENST00000456367 RPS3P23396 243 aaKnown RBP eCLIP4.96□□□□□ -1.62
PCDH9-203ENST00000456367 SLC6A2P23975 617 aa4.96□□□□□ -1.62
PCDH9-203ENST00000456367 ALDH4A1P30038 563 aa4.96□□□□□ -1.62
PCDH9-203ENST00000456367 EIF2DP41214 584 aaKnown RBP4.96□□□□□ -1.62
PCDH9-203ENST00000456367 ASMTP46597 345 aa4.96□□□□□ -1.62
PCDH9-203ENST00000456367 RPS5P46782 204 aaKnown RBP4.96□□□□□ -1.62
PCDH9-203ENST00000456367 TGFB2P61812 414 aa4.96□□□□□ -1.62
PCDH9-203ENST00000456367 GALNT3Q14435 633 aa4.96□□□□□ -1.62
PCDH9-203ENST00000456367 PPM1JQ5JR12 505 aa4.96□□□□□ -1.62
PCDH9-203ENST00000456367 ADNP2Q6IQ32 1131 aa4.96□□□□□ -1.62
PCDH9-203ENST00000456367 GDPGP1Q6ZNW5 385 aa4.96□□□□□ -1.62
PCDH9-203ENST00000456367 GALNT5Q7Z7M9 940 aa4.96□□□□□ -1.62
PCDH9-203ENST00000456367 LACC1Q8IV20 430 aa4.96□□□□□ -1.62
PCDH9-203ENST00000456367 ZNF655Q8N720 491 aaPredicted RBP4.96□□□□□ -1.62
PCDH9-203ENST00000456367 VANGL1Q8TAA9 524 aaPredicted RBP4.96□□□□□ -1.62
PCDH9-203ENST00000456367 TAAR1Q96RJ0 339 aa4.96□□□□□ -1.62
PCDH9-203ENST00000456367 GFM1Q96RP9 751 aaKnown RBP4.96□□□□□ -1.62
PCDH9-203ENST00000456367 MAPKAP1Q9BPZ7 522 aa4.96□□□□□ -1.62
PCDH9-203ENST00000456367 FUNDC2Q9BWH2 189 aa4.96□□□□□ -1.62
PCDH9-203ENST00000456367 PORCNQ9H237 461 aa4.96□□□□□ -1.62
PCDH9-203ENST00000456367 RC3H2Q9HBD1 1191 aaKnown RBP4.96□□□□□ -1.62
PCDH9-203ENST00000456367 SCUBE2Q9NQ36 999 aa4.96□□□□□ -1.62
PCDH9-203ENST00000456367 BTRCQ9Y297 605 aa4.96□□□□□ -1.62
PCDH9-203ENST00000456367 RIC1Q4ADV7 1423 aa4.96□□□□□ -1.62
PCDH9-203ENST00000456367 NT5C1B-RDH14C9J2C7 533 aa4.95□□□□□ -1.62
PCDH9-203ENST00000456367 INMT-MINDY4F8WBC2 141 aa4.95□□□□□ -1.62
PCDH9-203ENST00000456367 VILLO15195 856 aa4.95□□□□□ -1.62
PCDH9-203ENST00000456367 SLC19A2O60779 497 aa4.95□□□□□ -1.62
PCDH9-203ENST00000456367 TRAPPC2P0DI81 140 aa4.95□□□□□ -1.62
PCDH9-203ENST00000456367 TRAPPC2BP0DI82 140 aa4.95□□□□□ -1.62
PCDH9-203ENST00000456367 CETPP11597 493 aa4.95□□□□□ -1.62
PCDH9-203ENST00000456367 HSD17B1P14061 328 aa4.95□□□□□ -1.62
PCDH9-203ENST00000456367 M6PRP20645 277 aa4.95□□□□□ -1.62
PCDH9-203ENST00000456367 HTR1EP28566 365 aa4.95□□□□□ -1.62
PCDH9-203ENST00000456367 LCN1P31025 176 aa4.95□□□□□ -1.62
PCDH9-203ENST00000456367 SLC11A2P49281 568 aa4.95□□□□□ -1.62
PCDH9-203ENST00000456367 TKTL1P51854 596 aa4.95□□□□□ -1.62
PCDH9-203ENST00000456367 PPP3R1P63098 170 aa4.95□□□□□ -1.62
PCDH9-203ENST00000456367 DEFA5Q01523 94 aa4.95□□□□□ -1.62
PCDH9-203ENST00000456367 TWF1Q12792 350 aa4.95□□□□□ -1.62
PCDH9-203ENST00000456367 SEMA3AQ14563 771 aa4.95□□□□□ -1.62
PCDH9-203ENST00000456367 ECM1Q16610 540 aa4.95□□□□□ -1.62
PCDH9-203ENST00000456367 TEX44Q53QW1 395 aa4.95□□□□□ -1.62
PCDH9-203ENST00000456367 ALFQ53S48 1182 aa4.95□□□□□ -1.62
PCDH9-203ENST00000456367 HECTD2Q5U5R9 776 aa4.95□□□□□ -1.62
PCDH9-203ENST00000456367 UBQLNLQ8IYU4 475 aa4.95□□□□□ -1.62
PCDH9-203ENST00000456367 ADGRF2Q8IZF7 708 aa4.95□□□□□ -1.62
PCDH9-203ENST00000456367 MINDY1Q8N5J2 469 aa4.95□□□□□ -1.62
PCDH9-203ENST00000456367 GDPD1Q8N9F7 314 aa4.95□□□□□ -1.62
PCDH9-203ENST00000456367 C11orf65Q8NCR3 313 aa4.95□□□□□ -1.62
PCDH9-203ENST00000456367 EXOC2Q96KP1 924 aa4.95□□□□□ -1.62
PCDH9-203ENST00000456367 TMEM209Q96SK2 561 aa4.95□□□□□ -1.62
PCDH9-203ENST00000456367 PDCD2LQ9BRP1 358 aa4.95□□□□□ -1.62
PCDH9-203ENST00000456367 POLR1EQ9GZS1 481 aaKnown RBP4.95□□□□□ -1.62
PCDH9-203ENST00000456367 GBA3Q9H227 469 aa4.95□□□□□ -1.62
PCDH9-203ENST00000456367 SNTG1Q9NSN8 517 aa4.95□□□□□ -1.62
PCDH9-203ENST00000456367 NUDT4Q9NZJ9 180 aa4.95□□□□□ -1.62
PCDH9-203ENST00000456367 COPZ2Q9P299 210 aa4.95□□□□□ -1.62
PCDH9-203ENST00000456367 EVLQ9UI08 416 aaPredicted RBP4.95□□□□□ -1.62
PCDH9-203ENST00000456367 STUB1Q9UNE7 303 aa4.95□□□□□ -1.62
PCDH9-203ENST00000456367 CDC14AQ9UNH5 594 aa4.95□□□□□ -1.62
PCDH9-203ENST00000456367 PCDHA2Q9Y5H9 948 aa4.95□□□□□ -1.62
PCDH9-203ENST00000456367 GJA3Q9Y6H8 435 aa4.95□□□□□ -1.62
PCDH9-203ENST00000456367 BHMG1C9JSJ3 638 aaPredicted RBP4.95□□□□□ -1.62
PCDH9-203ENST00000456367 FGF1P05230 155 aa4.95□□□□□ -1.62
PCDH9-203ENST00000456367 ODC1P11926 461 aa4.95□□□□□ -1.62
PCDH9-203ENST00000456367 MATKP42679 507 aa4.95□□□□□ -1.62
PCDH9-203ENST00000456367 MAP2K3P46734 347 aa4.95□□□□□ -1.62
PCDH9-203ENST00000456367 ALDH3B2P48448 385 aa4.95□□□□□ -1.62
PCDH9-203ENST00000456367 CLK3P49761 638 aaKnown RBP4.95□□□□□ -1.62
PCDH9-203ENST00000456367 CLCQ05315 142 aa4.95□□□□□ -1.62
PCDH9-203ENST00000456367 GAD2Q05329 585 aa4.95□□□□□ -1.62
PCDH9-203ENST00000456367 PMS2P3Q13401 168 aa4.95□□□□□ -1.62
PCDH9-203ENST00000456367 DDX39BQ13838 428 aaKnown RBP4.95□□□□□ -1.62
PCDH9-203ENST00000456367 PCLAFQ15004 111 aa4.95□□□□□ -1.62
PCDH9-203ENST00000456367 KCTD19Q17RG1 926 aaPredicted RBP4.95□□□□□ -1.62
PCDH9-203ENST00000456367 DDX59Q5T1V6 619 aaKnown RBP eCLIP4.95□□□□□ -1.62
PCDH9-203ENST00000456367 LCN8Q6JVE9 175 aa4.95□□□□□ -1.62
PCDH9-203ENST00000456367 UTS2BQ765I0 119 aa4.95□□□□□ -1.62
PCDH9-203ENST00000456367 XYLT1Q86Y38 959 aa4.95□□□□□ -1.62
PCDH9-203ENST00000456367 CLEC10AQ8IUN9 316 aa4.95□□□□□ -1.62
PCDH9-203ENST00000456367 SLC7A5P1Q8MH63 180 aa4.95□□□□□ -1.62
PCDH9-203ENST00000456367 LINC00471Q8N535 108 aa4.95□□□□□ -1.62
PCDH9-203ENST00000456367 CSGALNACT1Q8TDX6 532 aa4.95□□□□□ -1.62
PCDH9-203ENST00000456367 CCDC107Q8WV48 283 aa4.95□□□□□ -1.62
PCDH9-203ENST00000456367 ACOT12Q8WYK0 555 aa4.95□□□□□ -1.62
PCDH9-203ENST00000456367 IFT27Q9BW83 186 aa4.95□□□□□ -1.62
PCDH9-203ENST00000456367 SEZ6LQ9BYH1 1024 aa4.95□□□□□ -1.62
PCDH9-203ENST00000456367 SLC39A8Q9C0K1 460 aa4.95□□□□□ -1.62
PCDH9-203ENST00000456367 TOR3AQ9H497 397 aa4.95□□□□□ -1.62
PCDH9-203ENST00000456367 ENPP5Q9UJA9 477 aa4.95□□□□□ -1.62
PCDH9-203ENST00000456367 ZNF451Q9Y4E5 1061 aa4.95□□□□□ -1.62
PCDH9-203ENST00000456367 F5H5T6 163 aa4.95□□□□□ -1.62
PCDH9-203ENST00000456367 MEIS2O14770 477 aa4.95□□□□□ -1.62
PCDH9-203ENST00000456367 HCN1O60741 890 aa4.95□□□□□ -1.62
PCDH9-203ENST00000456367 RFPL1O75677 317 aa4.95□□□□□ -1.62
PCDH9-203ENST00000456367 CYP7B1O75881 506 aa4.95□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms