RNA–Protein interactions for RNA: ENST00000453285.1

SDC4P-201, Transcript of syndecan 4 pseudogene, humanhuman

BASIC

Gene SDC4P, Length 601 nt, Biotype processed pseudogene, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC4P-201ENST00000453285 CCR7P32248 378 aa5.92□□□□□ -1.46
SDC4P-201ENST00000453285 CTSCP53634 463 aa5.92□□□□□ -1.46
SDC4P-201ENST00000453285 ADPRHP54922 357 aa5.92□□□□□ -1.46
SDC4P-201ENST00000453285 ATP6V0D1P61421 351 aa5.92□□□□□ -1.46
SDC4P-201ENST00000453285 OCRLQ01968 901 aa5.92□□□□□ -1.46
SDC4P-201ENST00000453285 CCDC15Q0P6D6 951 aa5.92□□□□□ -1.46
SDC4P-201ENST00000453285 BST1Q10588 318 aa5.92□□□□□ -1.46
SDC4P-201ENST00000453285 TMEM115Q12893 351 aaPredicted RBP5.92□□□□□ -1.46
SDC4P-201ENST00000453285 OR4D1Q15615 310 aa5.92□□□□□ -1.46
SDC4P-201ENST00000453285 CHI3L2Q15782 390 aa5.92□□□□□ -1.46
SDC4P-201ENST00000453285 FAM83EQ2M2I3 478 aa5.92□□□□□ -1.46
SDC4P-201ENST00000453285 ZNF658BQ4V348 819 aaPredicted RBP5.92□□□□□ -1.46
SDC4P-201ENST00000453285 TMEM259Q4ZIN3 620 aa5.92□□□□□ -1.46
SDC4P-201ENST00000453285 LDLRAP1Q5SW96 308 aa5.92□□□□□ -1.46
SDC4P-201ENST00000453285 SEL1L3Q68CR1 1132 aa5.92□□□□□ -1.46
SDC4P-201ENST00000453285 UGT3A1Q6NUS8 523 aa5.92□□□□□ -1.46
SDC4P-201ENST00000453285 PNCKQ6P2M8 343 aa5.92□□□□□ -1.46
SDC4P-201ENST00000453285 NAPRTQ6XQN6 538 aa5.92□□□□□ -1.46
SDC4P-201ENST00000453285 ZCCHC23Q6ZST2 131 aa5.92□□□□□ -1.46
SDC4P-201ENST00000453285 USP30Q70CQ3 517 aa5.92□□□□□ -1.46
SDC4P-201ENST00000453285 SYT13Q7L8C5 426 aa5.92□□□□□ -1.46
SDC4P-201ENST00000453285 OTOAQ7RTW8 1153 aa5.92□□□□□ -1.46
SDC4P-201ENST00000453285 ADGRG6Q86SQ4 1221 aa5.92□□□□□ -1.46
SDC4P-201ENST00000453285 RASGRP3Q8IV61 690 aa5.92□□□□□ -1.46
SDC4P-201ENST00000453285 TRIM42Q8IWZ5 723 aa5.92□□□□□ -1.46
SDC4P-201ENST00000453285 CPNE9Q8IYJ1 553 aa5.92□□□□□ -1.46
SDC4P-201ENST00000453285 SYNPOQ8N3V7 929 aa5.92□□□□□ -1.46
SDC4P-201ENST00000453285 NKAPQ8N5F7 415 aaKnown RBP5.92□□□□□ -1.46
SDC4P-201ENST00000453285 RASGEF1AQ8N9B8 481 aa5.92□□□□□ -1.46
SDC4P-201ENST00000453285 CCDC63Q8NA47 563 aa5.92□□□□□ -1.46
SDC4P-201ENST00000453285 TP53I13Q8NBR0 393 aaPredicted RBP5.92□□□□□ -1.46
SDC4P-201ENST00000453285 OR14C36Q8NHC7 312 aa5.92□□□□□ -1.46
SDC4P-201ENST00000453285 RHEBL1Q8TAI7 183 aa5.92□□□□□ -1.46
SDC4P-201ENST00000453285 RAB3IL1Q8TBN0 382 aa5.92□□□□□ -1.46
SDC4P-201ENST00000453285 BCAS4Q8TDM0 211 aa5.92□□□□□ -1.46
SDC4P-201ENST00000453285 ZNF473Q8WTR7 871 aaKnown RBP5.92□□□□□ -1.46
SDC4P-201ENST00000453285 ASB12Q8WXK4 309 aa5.92□□□□□ -1.46
SDC4P-201ENST00000453285 KIAA1191Q96A73 305 aa5.92□□□□□ -1.46
SDC4P-201ENST00000453285 SGF29Q96ES7 293 aa5.92□□□□□ -1.46
SDC4P-201ENST00000453285 SIPA1Q96FS4 1042 aa5.92□□□□□ -1.46
SDC4P-201ENST00000453285 COX14Q96I36 57 aa5.92□□□□□ -1.46
SDC4P-201ENST00000453285 SCYL1Q96KG9 808 aa5.92□□□□□ -1.46
SDC4P-201ENST00000453285 TSNARE1Q96NA8 513 aa5.92□□□□□ -1.46
SDC4P-201ENST00000453285 ATOH8Q96SQ7 321 aa5.92□□□□□ -1.46
SDC4P-201ENST00000453285 GATA5Q9BWX5 397 aaPredicted RBP5.92□□□□□ -1.46
SDC4P-201ENST00000453285 MRPL46Q9H2W6 279 aaKnown RBP5.92□□□□□ -1.46
SDC4P-201ENST00000453285 LTB4R2Q9NPC1 389 aa5.92□□□□□ -1.46
SDC4P-201ENST00000453285 ITM2CQ9NQX7 267 aa5.92□□□□□ -1.46
SDC4P-201ENST00000453285 MBNL1Q9NR56 388 aaKnown RBP5.92□□□□□ -1.46
SDC4P-201ENST00000453285 ARHGEF3Q9NR81 526 aa5.92□□□□□ -1.46
SDC4P-201ENST00000453285 SPATS2LQ9NUQ6 558 aaKnown RBP5.92□□□□□ -1.46
SDC4P-201ENST00000453285 FGFR1OP2Q9NVK5 253 aa5.92□□□□□ -1.46
SDC4P-201ENST00000453285 OXSMQ9NWU1 459 aa5.92□□□□□ -1.46
SDC4P-201ENST00000453285 KCTD5Q9NXV2 234 aa5.92□□□□□ -1.46
SDC4P-201ENST00000453285 USP36Q9P275 1121 aaKnown RBP5.92□□□□□ -1.46
SDC4P-201ENST00000453285 KLHL42Q9P2K6 505 aa5.92□□□□□ -1.46
SDC4P-201ENST00000453285 EBF1Q9UH73 591 aa5.92□□□□□ -1.46
SDC4P-201ENST00000453285 TRMT6Q9UJA5 497 aaKnown RBP5.92□□□□□ -1.46
SDC4P-201ENST00000453285 FZD4Q9ULV1 537 aa5.92□□□□□ -1.46
SDC4P-201ENST00000453285 SDK1Q7Z5N4 2213 aa5.92□□□□□ -1.46
SDC4P-201ENST00000453285 TNRC6BQ9UPQ9 1833 aaKnown RBP5.92□□□□□ -1.46
SDC4P-201ENST00000453285 MDC1Q14676 2089 aaKnown RBP5.91□□□□□ -1.46
SDC4P-201ENST00000453285 A0A1W2PQU0 124 aa5.91□□□□□ -1.46
SDC4P-201ENST00000453285 TCRBV21S2A2A0A5A6 115 aa5.91□□□□□ -1.46
SDC4P-201ENST00000453285 KANSL1LA0AUZ9 987 aa5.91□□□□□ -1.46
SDC4P-201ENST00000453285 CCDC189A1A4V9 331 aa5.91□□□□□ -1.46
SDC4P-201ENST00000453285 NEMP2A6NFY4 417 aa5.91□□□□□ -1.46
SDC4P-201ENST00000453285 FAM170BA6NMN3 283 aa5.91□□□□□ -1.46
SDC4P-201ENST00000453285 E5RI56 91 aa5.91□□□□□ -1.46
SDC4P-201ENST00000453285 CDC7O00311 574 aa5.91□□□□□ -1.46
SDC4P-201ENST00000453285 RAD51BO15315 384 aa5.91□□□□□ -1.46
SDC4P-201ENST00000453285 INPP4BO15327 924 aa5.91□□□□□ -1.46
SDC4P-201ENST00000453285 KLK8O60259 260 aa5.91□□□□□ -1.46
SDC4P-201ENST00000453285 SNX3O60493 162 aa5.91□□□□□ -1.46
SDC4P-201ENST00000453285 TRIM13O60858 407 aa5.91□□□□□ -1.46
SDC4P-201ENST00000453285 RNGTTO60942 597 aaKnown RBP5.91□□□□□ -1.46
SDC4P-201ENST00000453285 GPC4O75487 556 aa5.91□□□□□ -1.46
SDC4P-201ENST00000453285 TRIM16O95361 564 aa5.91□□□□□ -1.46
SDC4P-201ENST00000453285 PAK4O96013 591 aaPredicted RBP5.91□□□□□ -1.46
SDC4P-201ENST00000453285 IGLV3-19P01714 112 aa5.91□□□□□ -1.46
SDC4P-201ENST00000453285 SERPINE1P05121 402 aa5.91□□□□□ -1.46
SDC4P-201ENST00000453285 OR56A5P0C7T3 313 aa5.91□□□□□ -1.46
SDC4P-201ENST00000453285 MYL2P10916 166 aa5.91□□□□□ -1.46
SDC4P-201ENST00000453285 RALBP11234 206 aa5.91□□□□□ -1.46
SDC4P-201ENST00000453285 MSH3P20585 1137 aa5.91□□□□□ -1.46
SDC4P-201ENST00000453285 ATP5F1P24539 256 aaPredicted RBP5.91□□□□□ -1.46
SDC4P-201ENST00000453285 ACSL1P33121 698 aa5.91□□□□□ -1.46
SDC4P-201ENST00000453285 TRIM23P36406 574 aa5.91□□□□□ -1.46
SDC4P-201ENST00000453285 GPR1P46091 355 aa5.91□□□□□ -1.46
SDC4P-201ENST00000453285 PRLHRP49683 370 aa5.91□□□□□ -1.46
SDC4P-201ENST00000453285 TPMTP51580 245 aa5.91□□□□□ -1.46
SDC4P-201ENST00000453285 KPNA2P52292 529 aaKnown RBP5.91□□□□□ -1.46
SDC4P-201ENST00000453285 HK3P52790 923 aa5.91□□□□□ -1.46
SDC4P-201ENST00000453285 PRKAA2P54646 552 aa5.91□□□□□ -1.46
SDC4P-201ENST00000453285 DNAJB13P59910 316 aa5.91□□□□□ -1.46
SDC4P-201ENST00000453285 IL2P60568 153 aa5.91□□□□□ -1.46
SDC4P-201ENST00000453285 RPS21P63220 83 aaKnown RBP5.91□□□□□ -1.46
SDC4P-201ENST00000453285 STX3Q13277 289 aa5.91□□□□□ -1.46
SDC4P-201ENST00000453285 MAP7D1Q3KQU3 841 aa5.91□□□□□ -1.46
SDC4P-201ENST00000453285 TTC31Q49AM3 519 aaPredicted RBP5.91□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms