RNA–Protein interactions for RNA: ENST00000448238.2

NIPBL-202, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 1 (best) BASIC

Gene NIPBL, Length 8,729 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-202ENST00000448238 SHOXO15266 292 aa8.87□□□□□ -0.99
NIPBL-202ENST00000448238 GMDSO60547 372 aa8.87□□□□□ -0.99
NIPBL-202ENST00000448238 WDPCPO95876 746 aa8.87□□□□□ -0.99
NIPBL-202ENST00000448238 VDRP11473 427 aa8.87□□□□□ -0.99
NIPBL-202ENST00000448238 CD9P21926 228 aa8.87□□□□□ -0.99
NIPBL-202ENST00000448238 CMPK1P30085 196 aa8.87□□□□□ -0.99
NIPBL-202ENST00000448238 SEMA3AQ14563 771 aa8.87□□□□□ -0.99
NIPBL-202ENST00000448238 CHRNA6Q15825 494 aa8.87□□□□□ -0.99
NIPBL-202ENST00000448238 ARL14Q8N4G2 192 aa8.87□□□□□ -0.99
NIPBL-202ENST00000448238 COA1Q9GZY4 146 aa8.87□□□□□ -0.99
NIPBL-202ENST00000448238 GSKIPQ9P0R6 139 aa8.87□□□□□ -0.99
NIPBL-202ENST00000448238 MPIP34949 423 aa8.87□□□□□ -0.99
NIPBL-202ENST00000448238 ZNF81P51508 661 aa8.87□□□□□ -0.99
NIPBL-202ENST00000448238 UNQ6126/PRO20091Q6UXV3 157 aa8.87□□□□□ -0.99
NIPBL-202ENST00000448238 GPAT4Q86UL3 456 aa8.87□□□□□ -0.99
NIPBL-202ENST00000448238 DNASE1L2Q92874 299 aa8.87□□□□□ -0.99
NIPBL-202ENST00000448238 FUZQ9BT04 418 aa8.87□□□□□ -0.99
NIPBL-202ENST00000448238 GPRC5BQ9NZH0 403 aa8.87□□□□□ -0.99
NIPBL-202ENST00000448238 CC2D2AQ9P2K1 1620 aa8.87□□□□□ -0.99
NIPBL-202ENST00000448238 EFCAB7A8K855 629 aa8.87□□□□□ -0.99
NIPBL-202ENST00000448238 LTA4HP09960 611 aaKnown RBP8.87□□□□□ -0.99
NIPBL-202ENST00000448238 USP17L8P0C7I0 530 aa8.87□□□□□ -0.99
NIPBL-202ENST00000448238 TXNP10599 105 aaKnown RBP8.87□□□□□ -0.99
NIPBL-202ENST00000448238 ZNF35P13682 527 aa8.87□□□□□ -0.99
NIPBL-202ENST00000448238 CAPN3P20807 821 aa8.87□□□□□ -0.99
NIPBL-202ENST00000448238 PRKAR1BP31321 381 aa8.87□□□□□ -0.99
NIPBL-202ENST00000448238 PTENP60484 403 aa8.87□□□□□ -0.99
NIPBL-202ENST00000448238 CHAF1BQ13112 559 aa8.87□□□□□ -0.99
NIPBL-202ENST00000448238 AHSA2Q719I0 299 aa8.87□□□□□ -0.99
NIPBL-202ENST00000448238 GALNT12Q8IXK2 581 aa8.87□□□□□ -0.99
NIPBL-202ENST00000448238 CSGALNACT1Q8TDX6 532 aa8.87□□□□□ -0.99
NIPBL-202ENST00000448238 OVCA2Q8WZ82 227 aa8.87□□□□□ -0.99
NIPBL-202ENST00000448238 CCDC74AQ96AQ1 378 aa8.87□□□□□ -0.99
NIPBL-202ENST00000448238 OR2M4Q96R27 311 aa8.87□□□□□ -0.99
NIPBL-202ENST00000448238 ELOVL2Q9NXB9 296 aa8.87□□□□□ -0.99
NIPBL-202ENST00000448238 KCTD5Q9NXV2 234 aa8.87□□□□□ -0.99
NIPBL-202ENST00000448238 NUFIP1Q9UHK0 495 aaKnown RBP8.87□□□□□ -0.99
NIPBL-202ENST00000448238 ACSL5Q9ULC5 683 aa8.87□□□□□ -0.99
NIPBL-202ENST00000448238 TRIP11Q15643 1979 aa8.86□□□□□ -0.99
NIPBL-202ENST00000448238 C2orf72A6NCS6 295 aa8.86□□□□□ -0.99
NIPBL-202ENST00000448238 GPR182O15218 404 aa8.86□□□□□ -0.99
NIPBL-202ENST00000448238 TEX33O43247 280 aa8.86□□□□□ -0.99
NIPBL-202ENST00000448238 FADS1O60427 444 aa8.86□□□□□ -0.99
NIPBL-202ENST00000448238 ATP5A1P25705 553 aaKnown RBP8.86□□□□□ -0.99
NIPBL-202ENST00000448238 TAS2R50P59544 299 aa8.86□□□□□ -0.99
NIPBL-202ENST00000448238 ELF3P78545 371 aaPredicted RBP8.86□□□□□ -0.99
NIPBL-202ENST00000448238 C2orf80Q0P641 193 aa8.86□□□□□ -0.99
NIPBL-202ENST00000448238 STYK1Q6J9G0 422 aa8.86□□□□□ -0.99
NIPBL-202ENST00000448238 APBA2Q99767 749 aa8.86□□□□□ -0.99
NIPBL-202ENST00000448238 HBP1O60381 514 aa8.86□□□□□ -0.99
NIPBL-202ENST00000448238 SLC22A3O75751 556 aa8.86□□□□□ -0.99
NIPBL-202ENST00000448238 MATN4O95460 622 aa8.86□□□□□ -0.99
NIPBL-202ENST00000448238 ITGA5P08648 1049 aa8.86□□□□□ -0.99
NIPBL-202ENST00000448238 GNAZP19086 355 aa8.86□□□□□ -0.99
NIPBL-202ENST00000448238 CD247P20963 164 aa8.86□□□□□ -0.99
NIPBL-202ENST00000448238 CLCN7P51798 805 aa8.86□□□□□ -0.99
NIPBL-202ENST00000448238 MRPS10P82664 201 aaKnown RBP8.86□□□□□ -0.99
NIPBL-202ENST00000448238 OR4C15Q8NGM1 316 aa8.86□□□□□ -0.99
NIPBL-202ENST00000448238 ABHD5Q8WTS1 349 aa8.86□□□□□ -0.99
NIPBL-202ENST00000448238 PCDHB18PQ96TA0 734 aa8.86□□□□□ -0.99
NIPBL-202ENST00000448238 EYA1Q99502 592 aa8.86□□□□□ -0.99
NIPBL-202ENST00000448238 KCNIP2Q9NS61 270 aa8.86□□□□□ -0.99
NIPBL-202ENST00000448238 IFNW1P05000 195 aa8.86□□□□□ -0.99
NIPBL-202ENST00000448238 UROSP10746 265 aa8.86□□□□□ -0.99
NIPBL-202ENST00000448238 PRKCAP17252 672 aa8.86□□□□□ -0.99
NIPBL-202ENST00000448238 AZGP1P25311 298 aaKnown RBP8.86□□□□□ -0.99
NIPBL-202ENST00000448238 C14orf28Q4W4Y0 310 aa8.86□□□□□ -0.99
NIPBL-202ENST00000448238 XKR6Q5GH73 641 aa8.86□□□□□ -0.99
NIPBL-202ENST00000448238 SPATA19Q7Z5L4 167 aa8.86□□□□□ -0.99
NIPBL-202ENST00000448238 SLC37A3Q8NCC5 494 aa8.86□□□□□ -0.99
NIPBL-202ENST00000448238 PNPLA2Q96AD5 504 aa8.86□□□□□ -0.99
NIPBL-202ENST00000448238 EDC3Q96F86 508 aaKnown RBP8.86□□□□□ -0.99
NIPBL-202ENST00000448238 MAPKAP1Q9BPZ7 522 aa8.86□□□□□ -0.99
NIPBL-202ENST00000448238 C2orf49Q9BVC5 232 aaPredicted RBP8.86□□□□□ -0.99
NIPBL-202ENST00000448238 TBC1D17Q9HA65 648 aa8.86□□□□□ -0.99
NIPBL-202ENST00000448238 GRID2O43424 1007 aa8.86□□□□□ -0.99
NIPBL-202ENST00000448238 TBX1O43435 398 aa8.86□□□□□ -0.99
NIPBL-202ENST00000448238 TGDSO95455 350 aa8.86□□□□□ -0.99
NIPBL-202ENST00000448238 GPIP06744 558 aa8.86□□□□□ -0.99
NIPBL-202ENST00000448238 TCEA1P23193 301 aaKnown RBP8.86□□□□□ -0.99
NIPBL-202ENST00000448238 PRPH2P23942 346 aa8.86□□□□□ -0.99
NIPBL-202ENST00000448238 SEC23BQ15437 767 aa8.86□□□□□ -0.99
NIPBL-202ENST00000448238 TCEANCQ8N8B7 351 aa8.86□□□□□ -0.99
NIPBL-202ENST00000448238 SUN3Q8TAQ9 357 aa8.86□□□□□ -0.99
NIPBL-202ENST00000448238 CERS2Q96G23 380 aa8.86□□□□□ -0.99
NIPBL-202ENST00000448238 SECISBP2Q96T21 854 aaKnown RBP8.86□□□□□ -0.99
NIPBL-202ENST00000448238 TMEM121Q9BTD3 319 aa8.86□□□□□ -0.99
NIPBL-202ENST00000448238 CCDC32Q9BV29 185 aa8.86□□□□□ -0.99
NIPBL-202ENST00000448238 POLR1EQ9GZS1 481 aaKnown RBP8.86□□□□□ -0.99
NIPBL-202ENST00000448238 ZFP14Q9HCL3 533 aa8.86□□□□□ -0.99
NIPBL-202ENST00000448238 SPG21Q9NZD8 308 aa8.86□□□□□ -0.99
NIPBL-202ENST00000448238 PCM1Q15154 2024 aa8.86□□□□□ -0.99
NIPBL-202ENST00000448238 AGRPO00253 132 aa8.86□□□□□ -0.99
NIPBL-202ENST00000448238 ACTL6BO94805 426 aa8.86□□□□□ -0.99
NIPBL-202ENST00000448238 MIB1Q86YT6 1006 aa8.86□□□□□ -0.99
NIPBL-202ENST00000448238 ITGA11Q9UKX5 1188 aa8.86□□□□□ -0.99
NIPBL-202ENST00000448238 A0A1W2PRQ8 180 aa8.86□□□□□ -0.99
NIPBL-202ENST00000448238 CPSF4LA6NMK7 179 aaKnown RBP8.86□□□□□ -0.99
NIPBL-202ENST00000448238 HCRTR2O43614 444 aa8.86□□□□□ -0.99
NIPBL-202ENST00000448238 PSMD10O75832 226 aa8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms