RNA–Protein interactions for RNA: ENST00000443617.6

HERC1-201, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HERC1, Length 15,137 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-201ENST00000443617 ZIM2Q9NZV7 527 aa4.97□□□□□ -1.61
HERC1-201ENST00000443617 PCDH10Q9P2E7 1040 aa4.97□□□□□ -1.61
HERC1-201ENST00000443617 GPSM3Q9Y4H4 160 aa4.97□□□□□ -1.61
HERC1-201ENST00000443617 CXCR6O00574 342 aa4.97□□□□□ -1.61
HERC1-201ENST00000443617 CD3EAPO15446 510 aaKnown RBP4.97□□□□□ -1.61
HERC1-201ENST00000443617 SEMA3DO95025 777 aa4.97□□□□□ -1.61
HERC1-201ENST00000443617 NPPAP01160 153 aa4.97□□□□□ -1.61
HERC1-201ENST00000443617 CCNYL3P0C7X3 344 aa4.97□□□□□ -1.61
HERC1-201ENST00000443617 CHRM3P20309 590 aa4.97□□□□□ -1.61
HERC1-201ENST00000443617 AZGP1P25311 298 aaKnown RBP4.97□□□□□ -1.61
HERC1-201ENST00000443617 OR4D2P58180 307 aa4.97□□□□□ -1.61
HERC1-201ENST00000443617 FADDQ13158 208 aa4.97□□□□□ -1.61
HERC1-201ENST00000443617 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP4.97□□□□□ -1.61
HERC1-201ENST00000443617 C12orf29Q8N999 325 aa4.97□□□□□ -1.61
HERC1-201ENST00000443617 FNDC5Q8NAU1 212 aa4.97□□□□□ -1.61
HERC1-201ENST00000443617 SNED1Q8TER0 1413 aa4.97□□□□□ -1.61
HERC1-201ENST00000443617 PHF21AQ96BD5 680 aa4.97□□□□□ -1.61
HERC1-201ENST00000443617 AS3MTQ9HBK9 375 aa4.97□□□□□ -1.61
HERC1-201ENST00000443617 ABCD2Q9UBJ2 740 aa4.97□□□□□ -1.61
HERC1-201ENST00000443617 CYTH4Q9UIA0 394 aa4.97□□□□□ -1.61
HERC1-201ENST00000443617 HCN4Q9Y3Q4 1203 aa4.97□□□□□ -1.61
HERC1-201ENST00000443617 PCDHA9Q9Y5H5 950 aa4.97□□□□□ -1.61
HERC1-201ENST00000443617 IFRD1O00458 451 aaPredicted RBP4.97□□□□□ -1.61
HERC1-201ENST00000443617 MRPS14O60783 128 aaKnown RBP4.97□□□□□ -1.61
HERC1-201ENST00000443617 PGK1P00558 417 aa4.97□□□□□ -1.61
HERC1-201ENST00000443617 IFNA7P01567 189 aa4.97□□□□□ -1.61
HERC1-201ENST00000443617 UGT2B15P54855 530 aa4.97□□□□□ -1.61
HERC1-201ENST00000443617 GP2P55259 537 aaKnown RBP4.97□□□□□ -1.61
HERC1-201ENST00000443617 RAB25P57735 213 aa4.97□□□□□ -1.61
HERC1-201ENST00000443617 UFM1P61960 85 aa4.97□□□□□ -1.61
HERC1-201ENST00000443617 PRKG2Q13237 762 aa4.97□□□□□ -1.61
HERC1-201ENST00000443617 GTF2H3Q13889 308 aa4.97□□□□□ -1.61
HERC1-201ENST00000443617 CLCA4Q14CN2 919 aa4.97□□□□□ -1.61
HERC1-201ENST00000443617 GPAT3Q53EU6 434 aa4.97□□□□□ -1.61
HERC1-201ENST00000443617 MPZL3Q6UWV2 235 aa4.97□□□□□ -1.61
HERC1-201ENST00000443617 SLC38A6Q8IZM9 456 aa4.97□□□□□ -1.61
HERC1-201ENST00000443617 OR6F1Q8NGZ6 308 aa4.97□□□□□ -1.61
HERC1-201ENST00000443617 VAT1Q99536 393 aa4.97□□□□□ -1.61
HERC1-201ENST00000443617 OGDHLQ9ULD0 1010 aa4.97□□□□□ -1.61
HERC1-201ENST00000443617 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP4.97□□□□□ -1.61
HERC1-201ENST00000443617 POLR1CO15160 346 aaPredicted RBP4.97□□□□□ -1.61
HERC1-201ENST00000443617 RPLP0P05388 317 aaKnown RBP4.97□□□□□ -1.61
HERC1-201ENST00000443617 SLC2A4P14672 509 aa4.97□□□□□ -1.61
HERC1-201ENST00000443617 ANGPT1Q15389 498 aa4.97□□□□□ -1.61
HERC1-201ENST00000443617 DTWD1Q8N5C7 304 aa4.97□□□□□ -1.61
HERC1-201ENST00000443617 ANKK1Q8NFD2 765 aa4.97□□□□□ -1.61
HERC1-201ENST00000443617 OR10T2Q8NGX3 314 aa4.97□□□□□ -1.61
HERC1-201ENST00000443617 ZNF112Q9UJU3 913 aa4.97□□□□□ -1.61
HERC1-201ENST00000443617 INTS6Q9UL03 887 aaKnown RBP4.97□□□□□ -1.61
HERC1-201ENST00000443617 CNTN5O94779 1100 aa4.97□□□□□ -1.61
HERC1-201ENST00000443617 MLYCDO95822 493 aa4.97□□□□□ -1.61
HERC1-201ENST00000443617 AGXTP21549 392 aa4.97□□□□□ -1.61
HERC1-201ENST00000443617 UGT2B10P36537 528 aa4.97□□□□□ -1.61
HERC1-201ENST00000443617 PGGT1BP53609 377 aa4.97□□□□□ -1.61
HERC1-201ENST00000443617 SYT16Q17RD7 645 aa4.97□□□□□ -1.61
HERC1-201ENST00000443617 SULF1Q8IWU6 871 aa4.97□□□□□ -1.61
HERC1-201ENST00000443617 AKT1S1Q96B36 256 aa4.97□□□□□ -1.61
HERC1-201ENST00000443617 ZNF668Q96K58 619 aaPredicted RBP4.97□□□□□ -1.61
HERC1-201ENST00000443617 GPR78Q96P69 363 aa4.97□□□□□ -1.61
HERC1-201ENST00000443617 GBA2Q9HCG7 927 aaPredicted RBP4.97□□□□□ -1.61
HERC1-201ENST00000443617 PDP1Q9P0J1 537 aaPredicted RBP4.97□□□□□ -1.61
HERC1-201ENST00000443617 PLA2G6O60733 806 aa4.97□□□□□ -1.61
HERC1-201ENST00000443617 CYP7B1O75881 506 aa4.97□□□□□ -1.61
HERC1-201ENST00000443617 SLC22A5O76082 557 aa4.97□□□□□ -1.61
HERC1-201ENST00000443617 PGRP06401 933 aa4.97□□□□□ -1.61
HERC1-201ENST00000443617 SLURP2P0DP57 97 aa4.97□□□□□ -1.61
HERC1-201ENST00000443617 GALNT1Q10472 559 aaPredicted RBP4.97□□□□□ -1.61
HERC1-201ENST00000443617 KCNAB2Q13303 367 aa4.97□□□□□ -1.61
HERC1-201ENST00000443617 RAP1GAP2Q684P5 730 aa4.97□□□□□ -1.61
HERC1-201ENST00000443617 GPRIN3Q6ZVF9 776 aa4.97□□□□□ -1.61
HERC1-201ENST00000443617 PLEKHM3Q6ZWE6 761 aa4.97□□□□□ -1.61
HERC1-201ENST00000443617 ZNF438Q7Z4V0 828 aa4.97□□□□□ -1.61
HERC1-201ENST00000443617 ZDHHC17Q8IUH5 632 aa4.97□□□□□ -1.61
HERC1-201ENST00000443617 FBXO39Q8N4B4 442 aa4.97□□□□□ -1.61
HERC1-201ENST00000443617 CELF2-AS1Q8N7Q2 184 aa4.97□□□□□ -1.61
HERC1-201ENST00000443617 MAP6Q96JE9 813 aa4.97□□□□□ -1.61
HERC1-201ENST00000443617 NPM3O75607 178 aaKnown RBP4.97□□□□□ -1.61
HERC1-201ENST00000443617 CYP2C8P10632 490 aa4.97□□□□□ -1.61
HERC1-201ENST00000443617 CDONQ4KMG0 1287 aa4.97□□□□□ -1.61
HERC1-201ENST00000443617 GARNL3Q5VVW2 1013 aa4.97□□□□□ -1.61
HERC1-201ENST00000443617 NECAB2Q7Z6G3 386 aa4.97□□□□□ -1.61
HERC1-201ENST00000443617 P3H2Q8IVL5 708 aa4.97□□□□□ -1.61
HERC1-201ENST00000443617 PTGR2Q8N8N7 351 aaPredicted RBP4.97□□□□□ -1.61
HERC1-201ENST00000443617 CRELD1Q96HD1 420 aa4.97□□□□□ -1.61
HERC1-201ENST00000443617 TSEN34Q9BSV6 310 aaKnown RBP4.97□□□□□ -1.61
HERC1-201ENST00000443617 ZNF639Q9UID6 485 aa4.97□□□□□ -1.61
HERC1-201ENST00000443617 TSPAN16Q9UKR8 245 aa4.97□□□□□ -1.61
HERC1-201ENST00000443617 NEMP2A6NFY4 417 aa4.97□□□□□ -1.61
HERC1-201ENST00000443617 GABARAPO95166 117 aa4.97□□□□□ -1.61
HERC1-201ENST00000443617 CXCL8P10145 99 aa4.97□□□□□ -1.61
HERC1-201ENST00000443617 CES1P23141 567 aa4.97□□□□□ -1.61
HERC1-201ENST00000443617 KRT20P35900 424 aa4.97□□□□□ -1.61
HERC1-201ENST00000443617 UBE3AQ05086 875 aa4.97□□□□□ -1.61
HERC1-201ENST00000443617 ACAP2Q15057 778 aa4.97□□□□□ -1.61
HERC1-201ENST00000443617 DIRAS2Q96HU8 199 aa4.97□□□□□ -1.61
HERC1-201ENST00000443617 DNMT3LQ9UJW3 386 aa4.97□□□□□ -1.61
HERC1-201ENST00000443617 RP1L1Q8IWN7 2480 aaPredicted RBP4.97□□□□□ -1.61
HERC1-201ENST00000443617 LOC105371267A0A1B0GV96 52 aa4.97□□□□□ -1.61
HERC1-201ENST00000443617 MEN1O00255 615 aa4.97□□□□□ -1.61
HERC1-201ENST00000443617 HOXA10P31260 410 aaPredicted RBP4.97□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms