RNA–Protein interactions for RNA: ENST00000441542.6

HDAC9-214, Transcript of histone deacetylase 9, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene HDAC9, Length 3,210 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-214ENST00000441542 CLCN3P51790 818 aa7.46□□□□□ -1.21
HDAC9-214ENST00000441542 HK2P52789 917 aa7.46□□□□□ -1.21
HDAC9-214ENST00000441542 RAPSNQ13702 412 aa7.46□□□□□ -1.21
HDAC9-214ENST00000441542 TPRG1LQ5T0D9 272 aa7.46□□□□□ -1.21
HDAC9-214ENST00000441542 FAM72AQ5TYM5 149 aa7.46□□□□□ -1.21
HDAC9-214ENST00000441542 KIAA1614Q5VZ46 1190 aa7.46□□□□□ -1.21
HDAC9-214ENST00000441542 FAM72DQ6L9T8 149 aa7.46□□□□□ -1.21
HDAC9-214ENST00000441542 EFL1Q7Z2Z2 1120 aaKnown RBP7.46□□□□□ -1.21
HDAC9-214ENST00000441542 FAM72BQ86X60 149 aa7.46□□□□□ -1.21
HDAC9-214ENST00000441542 TMEM151BQ8IW70 566 aa7.46□□□□□ -1.21
HDAC9-214ENST00000441542 RHOXF1Q8NHV9 184 aa7.46□□□□□ -1.21
HDAC9-214ENST00000441542 PPP1R13LQ8WUF5 828 aa7.46□□□□□ -1.21
HDAC9-214ENST00000441542 TWIST2Q8WVJ9 160 aa7.46□□□□□ -1.21
HDAC9-214ENST00000441542 JPH3Q8WXH2 748 aaPredicted RBP7.46□□□□□ -1.21
HDAC9-214ENST00000441542 ATG4CQ96DT6 458 aa7.46□□□□□ -1.21
HDAC9-214ENST00000441542 MRPL45Q9BRJ2 306 aaKnown RBP7.46□□□□□ -1.21
HDAC9-214ENST00000441542 MLPHQ9BV36 600 aaPredicted RBP7.46□□□□□ -1.21
HDAC9-214ENST00000441542 SIK2Q9H0K1 926 aa7.46□□□□□ -1.21
HDAC9-214ENST00000441542 EXOSC4Q9NPD3 245 aaKnown RBP7.46□□□□□ -1.21
HDAC9-214ENST00000441542 BTBD3Q9Y2F9 522 aa7.46□□□□□ -1.21
HDAC9-214ENST00000441542 VWA7Q9Y334 891 aa7.46□□□□□ -1.21
HDAC9-214ENST00000441542 A0A1B0GTL3 188 aa7.46□□□□□ -1.22
HDAC9-214ENST00000441542 FAM172BPA6NC97 362 aa7.46□□□□□ -1.22
HDAC9-214ENST00000441542 A6NJY4 79 aa7.46□□□□□ -1.22
HDAC9-214ENST00000441542 SMLR1H3BR10 107 aa7.46□□□□□ -1.22
HDAC9-214ENST00000441542 MTSS1O43312 755 aa7.46□□□□□ -1.22
HDAC9-214ENST00000441542 GPIP06744 558 aa7.46□□□□□ -1.22
HDAC9-214ENST00000441542 UBL4AP11441 157 aa7.46□□□□□ -1.22
HDAC9-214ENST00000441542 CPB1P15086 417 aa7.46□□□□□ -1.22
HDAC9-214ENST00000441542 POLR2EP19388 210 aaKnown RBP7.46□□□□□ -1.22
HDAC9-214ENST00000441542 ARCN1P48444 511 aaKnown RBP7.46□□□□□ -1.22
HDAC9-214ENST00000441542 PPP2R2BQ00005 443 aa7.46□□□□□ -1.22
HDAC9-214ENST00000441542 BNIP2Q12982 314 aa7.46□□□□□ -1.22
HDAC9-214ENST00000441542 TUBA3CQ13748 450 aa7.46□□□□□ -1.22
HDAC9-214ENST00000441542 SURF1Q15526 300 aa7.46□□□□□ -1.22
HDAC9-214ENST00000441542 TTC23Q5W5X9 447 aa7.46□□□□□ -1.22
HDAC9-214ENST00000441542 DENND5AQ6IQ26 1287 aa7.46□□□□□ -1.22
HDAC9-214ENST00000441542 LCN8Q6JVE9 175 aa7.46□□□□□ -1.22
HDAC9-214ENST00000441542 RGMBQ6NW40 437 aa7.46□□□□□ -1.22
HDAC9-214ENST00000441542 NECAB2Q7Z6G3 386 aa7.46□□□□□ -1.22
HDAC9-214ENST00000441542 FAM160B2Q86V87 743 aa7.46□□□□□ -1.22
HDAC9-214ENST00000441542 JAZF1Q86VZ6 243 aa7.46□□□□□ -1.22
HDAC9-214ENST00000441542 ZBTB8OSQ8IWT0 167 aa7.46□□□□□ -1.22
HDAC9-214ENST00000441542 SPERTQ8NA61 448 aa7.46□□□□□ -1.22
HDAC9-214ENST00000441542 RDM1Q8NG50 284 aa7.46□□□□□ -1.22
HDAC9-214ENST00000441542 PNPT1Q8TCS8 783 aaKnown RBP7.46□□□□□ -1.22
HDAC9-214ENST00000441542 SH3RF2Q8TEC5 729 aa7.46□□□□□ -1.22
HDAC9-214ENST00000441542 FAM162AQ96A26 154 aa7.46□□□□□ -1.22
HDAC9-214ENST00000441542 PYCR2Q96C36 320 aa7.46□□□□□ -1.22
HDAC9-214ENST00000441542 VAT1Q99536 393 aa7.46□□□□□ -1.22
HDAC9-214ENST00000441542 NT5C1AQ9BXI3 368 aa7.46□□□□□ -1.22
HDAC9-214ENST00000441542 RHOBTB2Q9BYZ6 727 aa7.46□□□□□ -1.22
HDAC9-214ENST00000441542 ABCG8Q9H221 673 aa7.46□□□□□ -1.22
HDAC9-214ENST00000441542 GBA2Q9HCG7 927 aaPredicted RBP7.46□□□□□ -1.22
HDAC9-214ENST00000441542 RANGRFQ9HD47 186 aaPredicted RBP7.46□□□□□ -1.22
HDAC9-214ENST00000441542 STMN3Q9NZ72 180 aa7.46□□□□□ -1.22
HDAC9-214ENST00000441542 NIPSNAP3AQ9UFN0 247 aaPredicted RBP7.46□□□□□ -1.22
HDAC9-214ENST00000441542 FEM1BQ9UK73 627 aa7.46□□□□□ -1.22
HDAC9-214ENST00000441542 KLHL20Q9Y2M5 609 aa7.46□□□□□ -1.22
HDAC9-214ENST00000441542 PPEF2O14830 753 aa7.46□□□□□ -1.22
HDAC9-214ENST00000441542 BCKDKO14874 412 aa7.46□□□□□ -1.22
HDAC9-214ENST00000441542 STBD1O95210 358 aa7.46□□□□□ -1.22
HDAC9-214ENST00000441542 C1RP00736 705 aa7.46□□□□□ -1.22
HDAC9-214ENST00000441542 ERCC2P18074 760 aa7.46□□□□□ -1.22
HDAC9-214ENST00000441542 GNALP38405 381 aa7.46□□□□□ -1.22
HDAC9-214ENST00000441542 NUDT6P53370 316 aa7.46□□□□□ -1.22
HDAC9-214ENST00000441542 SH3BP2P78314 561 aa7.46□□□□□ -1.22
HDAC9-214ENST00000441542 POU6F2P78424 691 aaPredicted RBP7.46□□□□□ -1.22
HDAC9-214ENST00000441542 SP2Q02086 613 aa7.46□□□□□ -1.22
HDAC9-214ENST00000441542 ALDH6A1Q02252 535 aaKnown RBP7.46□□□□□ -1.22
HDAC9-214ENST00000441542 ITKQ08881 620 aa7.46□□□□□ -1.22
HDAC9-214ENST00000441542 NAB1Q13506 487 aa7.46□□□□□ -1.22
HDAC9-214ENST00000441542 CRY1Q16526 586 aa7.46□□□□□ -1.22
HDAC9-214ENST00000441542 DALRD3Q5D0E6 543 aaKnown RBP7.46□□□□□ -1.22
HDAC9-214ENST00000441542 ARMC4Q5T2S8 1044 aa7.46□□□□□ -1.22
HDAC9-214ENST00000441542 ATF7IP2Q5U623 682 aa7.46□□□□□ -1.22
HDAC9-214ENST00000441542 SULT1C3Q6IMI6 304 aa7.46□□□□□ -1.22
HDAC9-214ENST00000441542 NRARPQ7Z6K4 114 aa7.46□□□□□ -1.22
HDAC9-214ENST00000441542 GALNT10Q86SR1 603 aa7.46□□□□□ -1.22
HDAC9-214ENST00000441542 TTC39CQ8N584 583 aa7.46□□□□□ -1.22
HDAC9-214ENST00000441542 TEX19Q8NA77 164 aa7.46□□□□□ -1.22
HDAC9-214ENST00000441542 MINDY2Q8NBR6 621 aa7.46□□□□□ -1.22
HDAC9-214ENST00000441542 SNAPC3Q92966 411 aa7.46□□□□□ -1.22
HDAC9-214ENST00000441542 TMEM125Q96AQ2 219 aa7.46□□□□□ -1.22
HDAC9-214ENST00000441542 SERINC2Q96SA4 455 aa7.46□□□□□ -1.22
HDAC9-214ENST00000441542 MRPL57Q9BQC6 102 aaKnown RBP7.46□□□□□ -1.22
HDAC9-214ENST00000441542 CLSTN3Q9BQT9 956 aa7.46□□□□□ -1.22
HDAC9-214ENST00000441542 DNAI2Q9GZS0 605 aa7.46□□□□□ -1.22
HDAC9-214ENST00000441542 CARS2Q9HA77 564 aaKnown RBP7.46□□□□□ -1.22
HDAC9-214ENST00000441542 NTN4Q9HB63 628 aa7.46□□□□□ -1.22
HDAC9-214ENST00000441542 TMEM39AQ9NV64 488 aa7.46□□□□□ -1.22
HDAC9-214ENST00000441542 GMIPQ9P107 970 aa7.46□□□□□ -1.22
HDAC9-214ENST00000441542 ORC6Q9Y5N6 252 aa7.46□□□□□ -1.22
HDAC9-214ENST00000441542 MAU2Q9Y6X3 613 aa7.46□□□□□ -1.22
HDAC9-214ENST00000441542 LOC100130705A0A1B0GUX0 176 aa7.45□□□□□ -1.22
HDAC9-214ENST00000441542 TTC24A2A3L6 582 aaPredicted RBP7.45□□□□□ -1.22
HDAC9-214ENST00000441542 ASB14A6NK59 587 aa7.45□□□□□ -1.22
HDAC9-214ENST00000441542 UBXN8O00124 270 aa7.45□□□□□ -1.22
HDAC9-214ENST00000441542 TSPAN4O14817 238 aa7.45□□□□□ -1.22
HDAC9-214ENST00000441542 SLC22A1O15245 554 aa7.45□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms