RNA–Protein interactions for RNA: ENST00000431429.1

HMGB1P27-201, Transcript of high mobility group box 1 pseudogene 27, humanhuman

BASIC

Gene HMGB1P27, Length 603 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P27-201ENST00000431429 MC5RP33032 325 aa3.09□□□□□ -1.91
HMGB1P27-201ENST00000431429 COPB2P35606 906 aa3.09□□□□□ -1.91
HMGB1P27-201ENST00000431429 CLCNKAP51800 687 aa3.09□□□□□ -1.91
HMGB1P27-201ENST00000431429 LIMK1P53667 647 aa3.09□□□□□ -1.91
HMGB1P27-201ENST00000431429 CSE1LP55060 971 aaKnown RBP3.09□□□□□ -1.91
HMGB1P27-201ENST00000431429 CDH13P55290 713 aa3.09□□□□□ -1.91
HMGB1P27-201ENST00000431429 RBP5P82980 135 aa3.09□□□□□ -1.91
HMGB1P27-201ENST00000431429 TSPY1Q01534 308 aa3.09□□□□□ -1.91
HMGB1P27-201ENST00000431429 PPATQ06203 517 aa3.09□□□□□ -1.91
HMGB1P27-201ENST00000431429 MELKQ14680 651 aa3.09□□□□□ -1.91
HMGB1P27-201ENST00000431429 SNAPC1Q16533 368 aa3.09□□□□□ -1.91
HMGB1P27-201ENST00000431429 TMEM211Q6ICI0 200 aa3.09□□□□□ -1.91
HMGB1P27-201ENST00000431429 SLC36A4Q6YBV0 504 aa3.09□□□□□ -1.91
HMGB1P27-201ENST00000431429 COLCA1Q6ZS62 124 aa3.09□□□□□ -1.91
HMGB1P27-201ENST00000431429 GALNTL5Q7Z4T8 443 aa3.09□□□□□ -1.91
HMGB1P27-201ENST00000431429 CCDC190Q86UF4 302 aa3.09□□□□□ -1.91
HMGB1P27-201ENST00000431429 GLCCI1Q86VQ1 547 aa3.09□□□□□ -1.91
HMGB1P27-201ENST00000431429 DNAJC10Q8IXB1 793 aa3.09□□□□□ -1.91
HMGB1P27-201ENST00000431429 THNSL1Q8IYQ7 743 aa3.09□□□□□ -1.91
HMGB1P27-201ENST00000431429 ZNF114Q8NC26 417 aa3.09□□□□□ -1.91
HMGB1P27-201ENST00000431429 MCUQ8NE86 351 aa3.09□□□□□ -1.91
HMGB1P27-201ENST00000431429 OR6J1Q8NGC5 347 aa3.09□□□□□ -1.91
HMGB1P27-201ENST00000431429 ERLEC1Q96DZ1 483 aa3.09□□□□□ -1.91
HMGB1P27-201ENST00000431429 PCYT2Q99447 389 aa3.09□□□□□ -1.91
HMGB1P27-201ENST00000431429 DDOQ99489 341 aa3.09□□□□□ -1.91
HMGB1P27-201ENST00000431429 EQTNQ9NQ60 294 aa3.09□□□□□ -1.91
HMGB1P27-201ENST00000431429 MBNL1Q9NR56 388 aaKnown RBP3.09□□□□□ -1.91
HMGB1P27-201ENST00000431429 POT1Q9NUX5 634 aa3.09□□□□□ -1.91
HMGB1P27-201ENST00000431429 TMEM30AQ9NV96 361 aa3.09□□□□□ -1.91
HMGB1P27-201ENST00000431429 ELOVL5Q9NYP7 299 aa3.09□□□□□ -1.91
HMGB1P27-201ENST00000431429 B3GALT5Q9Y2C3 310 aa3.09□□□□□ -1.91
HMGB1P27-201ENST00000431429 PAM16Q9Y3D7 125 aa3.09□□□□□ -1.91
HMGB1P27-201ENST00000431429 NME7Q9Y5B8 376 aa3.09□□□□□ -1.91
HMGB1P27-201ENST00000431429 PCDHGA5Q9Y5G8 931 aa3.09□□□□□ -1.91
HMGB1P27-201ENST00000431429 LIPGQ9Y5X9 500 aa3.09□□□□□ -1.91
HMGB1P27-201ENST00000431429 FLT1P17948 1338 aa3.09□□□□□ -1.91
HMGB1P27-201ENST00000431429 A0A087WV48 116 aa3.08□□□□□ -1.92
HMGB1P27-201ENST00000431429 OR2M5A3KFT3 312 aa3.08□□□□□ -1.92
HMGB1P27-201ENST00000431429 WDR91A4D1P6 747 aa3.08□□□□□ -1.92
HMGB1P27-201ENST00000431429 OR6C75A6NL08 312 aa3.08□□□□□ -1.92
HMGB1P27-201ENST00000431429 SRRM3A6NNA2 597 aaPredicted RBP3.08□□□□□ -1.92
HMGB1P27-201ENST00000431429 PRAMEF11O60813 436 aa3.08□□□□□ -1.92
HMGB1P27-201ENST00000431429 TADA2AO75478 443 aa3.08□□□□□ -1.92
HMGB1P27-201ENST00000431429 SYF2O95926 243 aaKnown RBP3.08□□□□□ -1.92
HMGB1P27-201ENST00000431429 S1PR1P21453 382 aa3.08□□□□□ -1.92
HMGB1P27-201ENST00000431429 KRT2P35908 639 aa3.08□□□□□ -1.92
HMGB1P27-201ENST00000431429 PGGT1BP53609 377 aa3.08□□□□□ -1.92
HMGB1P27-201ENST00000431429 CTSCP53634 463 aa3.08□□□□□ -1.92
HMGB1P27-201ENST00000431429 EGR4Q05215 589 aa3.08□□□□□ -1.92
HMGB1P27-201ENST00000431429 TROAPQ12815 778 aa3.08□□□□□ -1.92
HMGB1P27-201ENST00000431429 DHX34Q14147 1143 aaKnown RBP3.08□□□□□ -1.92
HMGB1P27-201ENST00000431429 NFATC4Q14934 902 aa3.08□□□□□ -1.92
HMGB1P27-201ENST00000431429 CTF1Q16619 201 aa3.08□□□□□ -1.92
HMGB1P27-201ENST00000431429 MEP1AQ16819 746 aa3.08□□□□□ -1.92
HMGB1P27-201ENST00000431429 KLHL26Q53HC5 615 aa3.08□□□□□ -1.92
HMGB1P27-201ENST00000431429 ARMC4Q5T2S8 1044 aa3.08□□□□□ -1.92
HMGB1P27-201ENST00000431429 ZNF425Q6IV72 752 aa3.08□□□□□ -1.92
HMGB1P27-201ENST00000431429 ZNF34Q8IZ26 560 aa3.08□□□□□ -1.92
HMGB1P27-201ENST00000431429 FAM9BQ8IZU0 186 aa3.08□□□□□ -1.92
HMGB1P27-201ENST00000431429 C1orf87Q8N0U7 546 aa3.08□□□□□ -1.92
HMGB1P27-201ENST00000431429 EMC1Q8N766 993 aa3.08□□□□□ -1.92
HMGB1P27-201ENST00000431429 PAPD5Q8NDF8 572 aaKnown RBP3.08□□□□□ -1.92
HMGB1P27-201ENST00000431429 HMGCLL1Q8TB92 370 aa3.08□□□□□ -1.92
HMGB1P27-201ENST00000431429 TBC1D16Q8TBP0 767 aa3.08□□□□□ -1.92
HMGB1P27-201ENST00000431429 WDR20Q8TBZ3 569 aa3.08□□□□□ -1.92
HMGB1P27-201ENST00000431429 FAM216AQ8WUB2 273 aa3.08□□□□□ -1.92
HMGB1P27-201ENST00000431429 HDAC11Q96DB2 347 aa3.08□□□□□ -1.92
HMGB1P27-201ENST00000431429 SPACA9Q96E40 222 aaPredicted RBP3.08□□□□□ -1.92
HMGB1P27-201ENST00000431429 TXNDC15Q96J42 360 aa3.08□□□□□ -1.92
HMGB1P27-201ENST00000431429 OLFM1Q99784 485 aa3.08□□□□□ -1.92
HMGB1P27-201ENST00000431429 KXD1Q9BQD3 176 aa3.08□□□□□ -1.92
HMGB1P27-201ENST00000431429 C16orf70Q9BSU1 422 aa3.08□□□□□ -1.92
HMGB1P27-201ENST00000431429 KRTAP4-9Q9BYQ8 210 aa3.08□□□□□ -1.92
HMGB1P27-201ENST00000431429 GOLPH3LQ9H4A5 285 aa3.08□□□□□ -1.92
HMGB1P27-201ENST00000431429 RAD21L1Q9H4I0 556 aa3.08□□□□□ -1.92
HMGB1P27-201ENST00000431429 NOL11Q9H8H0 719 aaKnown RBP3.08□□□□□ -1.92
HMGB1P27-201ENST00000431429 PIH1D3Q9NQM4 214 aaKnown RBP3.08□□□□□ -1.92
HMGB1P27-201ENST00000431429 TAS2R14Q9NYV8 317 aa3.08□□□□□ -1.92
HMGB1P27-201ENST00000431429 DDX25Q9UHL0 483 aaKnown RBP3.08□□□□□ -1.92
HMGB1P27-201ENST00000431429 INSL5Q9Y5Q6 135 aa3.08□□□□□ -1.92
HMGB1P27-201ENST00000431429 SYNJ2O15056 1496 aa3.08□□□□□ -1.92
HMGB1P27-201ENST00000431429 MROH2BQ7Z745 1585 aa3.08□□□□□ -1.92
HMGB1P27-201ENST00000431429 PCSK5Q92824 1860 aa3.07□□□□□ -1.92
HMGB1P27-201ENST00000431429 EDDM13A0A1B0GTR0 161 aa3.07□□□□□ -1.92
HMGB1P27-201ENST00000431429 A0A1W2PPQ1 181 aa3.07□□□□□ -1.92
HMGB1P27-201ENST00000431429 LILRA5A6NI73 299 aa3.07□□□□□ -1.92
HMGB1P27-201ENST00000431429 H0Y626 953 aa3.07□□□□□ -1.92
HMGB1P27-201ENST00000431429 CLGNO14967 610 aa3.07□□□□□ -1.92
HMGB1P27-201ENST00000431429 MID1O15344 667 aa3.07□□□□□ -1.92
HMGB1P27-201ENST00000431429 SLC7A4O43246 635 aa3.07□□□□□ -1.92
HMGB1P27-201ENST00000431429 TBCAO75347 108 aaKnown RBP3.07□□□□□ -1.92
HMGB1P27-201ENST00000431429 ZWINTO95229 277 aa3.07□□□□□ -1.92
HMGB1P27-201ENST00000431429 CELF2O95319 508 aaKnown RBP3.07□□□□□ -1.92
HMGB1P27-201ENST00000431429 TRUB2O95900 331 aaKnown RBP3.07□□□□□ -1.92
HMGB1P27-201ENST00000431429 GLUD1P00367 558 aa3.07□□□□□ -1.92
HMGB1P27-201ENST00000431429 HOXC6P09630 235 aa3.07□□□□□ -1.92
HMGB1P27-201ENST00000431429 LINC00271P0C7V0 271 aa3.07□□□□□ -1.92
HMGB1P27-201ENST00000431429 VPREB1P12018 145 aa3.07□□□□□ -1.92
HMGB1P27-201ENST00000431429 ZNF12P17014 697 aa3.07□□□□□ -1.92
HMGB1P27-201ENST00000431429 ITGB8P26012 769 aa3.07□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms