RNA–Protein interactions for RNA: ENST00000413333.1

HMGB3P31-201, Transcript of high mobility group box 3 pseudogene 31, humanhuman

BASIC

Gene HMGB3P31, Length 595 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P31-201ENST00000413333 ZNF804BA4D1E1 1349 aa4.7□□□□□ -1.66
HMGB3P31-201ENST00000413333 PLK4O00444 970 aa4.69□□□□□ -1.66
HMGB3P31-201ENST00000413333 PSMA7O14818 248 aa4.69□□□□□ -1.66
HMGB3P31-201ENST00000413333 WDR46O15213 610 aaKnown RBP4.69□□□□□ -1.66
HMGB3P31-201ENST00000413333 SLC7A4O43246 635 aa4.69□□□□□ -1.66
HMGB3P31-201ENST00000413333 SERPINI2O75830 405 aa4.69□□□□□ -1.66
HMGB3P31-201ENST00000413333 UGT1A1P22309 533 aa4.69□□□□□ -1.66
HMGB3P31-201ENST00000413333 HSPA4P34932 840 aa4.69□□□□□ -1.66
HMGB3P31-201ENST00000413333 PRKCIP41743 596 aa4.69□□□□□ -1.66
HMGB3P31-201ENST00000413333 AMTP48728 403 aa4.69□□□□□ -1.66
HMGB3P31-201ENST00000413333 CLDN20P56880 219 aa4.69□□□□□ -1.66
HMGB3P31-201ENST00000413333 HSPB3Q12988 150 aa4.69□□□□□ -1.66
HMGB3P31-201ENST00000413333 KLF9Q13886 244 aaPredicted RBP4.69□□□□□ -1.66
HMGB3P31-201ENST00000413333 MELKQ14680 651 aa4.69□□□□□ -1.66
HMGB3P31-201ENST00000413333 LCN10Q6JVE6 187 aa4.69□□□□□ -1.66
HMGB3P31-201ENST00000413333 FIGLAQ6QHK4 219 aa4.69□□□□□ -1.66
HMGB3P31-201ENST00000413333 ZBTB49Q6ZSB9 765 aa4.69□□□□□ -1.66
HMGB3P31-201ENST00000413333 GLRX5Q86SX6 157 aa4.69□□□□□ -1.66
HMGB3P31-201ENST00000413333 ADAMTS14Q8WXS8 1223 aa4.69□□□□□ -1.66
HMGB3P31-201ENST00000413333 WASF1Q92558 559 aa4.69□□□□□ -1.66
HMGB3P31-201ENST00000413333 PRMT6Q96LA8 375 aaPredicted RBP4.69□□□□□ -1.66
HMGB3P31-201ENST00000413333 MS4A10Q96PG2 267 aa4.69□□□□□ -1.66
HMGB3P31-201ENST00000413333 SORCS2Q96PQ0 1159 aa4.69□□□□□ -1.66
HMGB3P31-201ENST00000413333 NEK1Q96PY6 1258 aa4.69□□□□□ -1.66
HMGB3P31-201ENST00000413333 PCYT2Q99447 389 aa4.69□□□□□ -1.66
HMGB3P31-201ENST00000413333 FERMT1Q9BQL6 677 aa4.69□□□□□ -1.66
HMGB3P31-201ENST00000413333 MGME1Q9BQP7 344 aa4.69□□□□□ -1.66
HMGB3P31-201ENST00000413333 ABHD6Q9BV23 337 aa4.69□□□□□ -1.66
HMGB3P31-201ENST00000413333 RBM38Q9H0Z9 239 aaKnown RBP4.69□□□□□ -1.66
HMGB3P31-201ENST00000413333 TBC1D17Q9HA65 648 aa4.69□□□□□ -1.66
HMGB3P31-201ENST00000413333 EQTNQ9NQ60 294 aa4.69□□□□□ -1.66
HMGB3P31-201ENST00000413333 MCM9Q9NXL9 1143 aa4.69□□□□□ -1.66
HMGB3P31-201ENST00000413333 OR6C75A6NL08 312 aa4.68□□□□□ -1.66
HMGB3P31-201ENST00000413333 SSX4O60224 188 aa4.68□□□□□ -1.66
HMGB3P31-201ENST00000413333 DDNO94850 711 aaPredicted RBP4.68□□□□□ -1.66
HMGB3P31-201ENST00000413333 OR52Z1P0C646 297 aa4.68□□□□□ -1.66
HMGB3P31-201ENST00000413333 TMEM191BP0C7N4 346 aa4.68□□□□□ -1.66
HMGB3P31-201ENST00000413333 PSG1P11464 419 aa4.68□□□□□ -1.66
HMGB3P31-201ENST00000413333 HOXB2P14652 356 aa4.68□□□□□ -1.66
HMGB3P31-201ENST00000413333 CD38P28907 300 aa4.68□□□□□ -1.66
HMGB3P31-201ENST00000413333 SSTR2P30874 369 aa4.68□□□□□ -1.66
HMGB3P31-201ENST00000413333 ABCG1P45844 678 aa4.68□□□□□ -1.66
HMGB3P31-201ENST00000413333 FASLGP48023 281 aa4.68□□□□□ -1.66
HMGB3P31-201ENST00000413333 RFX2P48378 723 aa4.68□□□□□ -1.66
HMGB3P31-201ENST00000413333 CLCNKAP51800 687 aa4.68□□□□□ -1.66
HMGB3P31-201ENST00000413333 ZNF75DP51815 510 aa4.68□□□□□ -1.66
HMGB3P31-201ENST00000413333 CAPZA1P52907 286 aa4.68□□□□□ -1.66
HMGB3P31-201ENST00000413333 SEC61BP60468 96 aaKnown RBP4.68□□□□□ -1.66
HMGB3P31-201ENST00000413333 ABATP80404 500 aa4.68□□□□□ -1.66
HMGB3P31-201ENST00000413333 PDE1BQ01064 536 aa4.68□□□□□ -1.66
HMGB3P31-201ENST00000413333 ROR2Q01974 943 aaKnown RBP4.68□□□□□ -1.66
HMGB3P31-201ENST00000413333 RBPJQ06330 500 aa4.68□□□□□ -1.66
HMGB3P31-201ENST00000413333 ETFDHQ16134 617 aa4.68□□□□□ -1.66
HMGB3P31-201ENST00000413333 SMN1Q16637 294 aaKnown RBP4.68□□□□□ -1.66
HMGB3P31-201ENST00000413333 KRTCAP3Q53RY4 240 aa4.68□□□□□ -1.66
HMGB3P31-201ENST00000413333 MPP7Q5T2T1 576 aa4.68□□□□□ -1.66
HMGB3P31-201ENST00000413333 RNASEH2BQ5TBB1 312 aaKnown RBP4.68□□□□□ -1.66
HMGB3P31-201ENST00000413333 ZNF534Q76KX8 674 aa4.68□□□□□ -1.66
HMGB3P31-201ENST00000413333 CCDC91Q7Z6B0 441 aa4.68□□□□□ -1.66
HMGB3P31-201ENST00000413333 MAP7D3Q8IWC1 876 aa4.68□□□□□ -1.66
HMGB3P31-201ENST00000413333 PM20D2Q8IYS1 436 aa4.68□□□□□ -1.66
HMGB3P31-201ENST00000413333 SLC5A8Q8N695 610 aa4.68□□□□□ -1.66
HMGB3P31-201ENST00000413333 GCSAMQ8N6F7 178 aa4.68□□□□□ -1.66
HMGB3P31-201ENST00000413333 NRACQ8N912 160 aa4.68□□□□□ -1.66
HMGB3P31-201ENST00000413333 SLC38A9Q8NBW4 561 aa4.68□□□□□ -1.66
HMGB3P31-201ENST00000413333 NEXN-AS1Q8NBZ9 246 aa4.68□□□□□ -1.66
HMGB3P31-201ENST00000413333 OR14A16Q8NHC5 309 aa4.68□□□□□ -1.66
HMGB3P31-201ENST00000413333 WFIKKN2Q8TEU8 576 aa4.68□□□□□ -1.66
HMGB3P31-201ENST00000413333 KCNE4Q8WWG9 221 aa4.68□□□□□ -1.66
HMGB3P31-201ENST00000413333 RPL36ALQ969Q0 106 aaKnown RBP4.68□□□□□ -1.66
HMGB3P31-201ENST00000413333 FAM162AQ96A26 154 aa4.68□□□□□ -1.66
HMGB3P31-201ENST00000413333 FAM81BQ96LP2 452 aa4.68□□□□□ -1.66
HMGB3P31-201ENST00000413333 CCDC114Q96M63 670 aa4.68□□□□□ -1.66
HMGB3P31-201ENST00000413333 SLC25A33Q9BSK2 321 aa4.68□□□□□ -1.66
HMGB3P31-201ENST00000413333 FNDC11Q9BVV2 318 aa4.68□□□□□ -1.66
HMGB3P31-201ENST00000413333 KRTAP4-11Q9BYQ6 195 aa4.68□□□□□ -1.66
HMGB3P31-201ENST00000413333 SEMA6AQ9H2E6 1030 aa4.68□□□□□ -1.66
HMGB3P31-201ENST00000413333 EBF3Q9H4W6 596 aa4.68□□□□□ -1.66
HMGB3P31-201ENST00000413333 MBNL1Q9NR56 388 aaKnown RBP4.68□□□□□ -1.66
HMGB3P31-201ENST00000413333 IL17BQ9UHF5 180 aa4.68□□□□□ -1.66
HMGB3P31-201ENST00000413333 FRMD4BQ9Y2L6 1034 aa4.68□□□□□ -1.66
HMGB3P31-201ENST00000413333 TMEM184BQ9Y519 407 aaPredicted RBP4.68□□□□□ -1.66
HMGB3P31-201ENST00000413333 LIPGQ9Y5X9 500 aa4.68□□□□□ -1.66
HMGB3P31-201ENST00000413333 ZFP37Q9Y6Q3 630 aaPredicted RBP4.68□□□□□ -1.66
HMGB3P31-201ENST00000413333 CKAP5Q14008 2032 aa4.68□□□□□ -1.66
HMGB3P31-201ENST00000413333 H3BNX3 289 aa4.67□□□□□ -1.66
HMGB3P31-201ENST00000413333 MEIS2O14770 477 aa4.67□□□□□ -1.66
HMGB3P31-201ENST00000413333 PDGFRAP16234 1089 aa4.67□□□□□ -1.66
HMGB3P31-201ENST00000413333 KCNA5P22460 613 aa4.67□□□□□ -1.66
HMGB3P31-201ENST00000413333 AZGP1P25311 298 aaKnown RBP4.67□□□□□ -1.66
HMGB3P31-201ENST00000413333 ATP5DP30049 168 aa4.67□□□□□ -1.66
HMGB3P31-201ENST00000413333 HOXD3P31249 432 aaPredicted RBP4.67□□□□□ -1.66
HMGB3P31-201ENST00000413333 HOXC13P31276 330 aa4.67□□□□□ -1.66
HMGB3P31-201ENST00000413333 BMXP51813 675 aa4.67□□□□□ -1.66
HMGB3P31-201ENST00000413333 HMGA2P52926 109 aa4.67□□□□□ -1.66
HMGB3P31-201ENST00000413333 SSBP2P81877 361 aaPredicted RBP4.67□□□□□ -1.66
HMGB3P31-201ENST00000413333 COG7P83436 770 aa4.67□□□□□ -1.66
HMGB3P31-201ENST00000413333 ACSM1Q08AH1 577 aa4.67□□□□□ -1.66
HMGB3P31-201ENST00000413333 PPIGQ13427 754 aaKnown RBP eCLIP4.67□□□□□ -1.66
HMGB3P31-201ENST00000413333 ZNF273Q14593 569 aa4.67□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms