RNA–Protein interactions for RNA: ENST00000409531.5

TSPAN4-208, Transcript of tetraspanin 4, humanhuman

TSL 5 BASIC

Gene TSPAN4, Length 1,339 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-208ENST00000409531 NSG1P42857 185 aa16.32■□□□□ 0.2
TSPAN4-208ENST00000409531 LEPRP48357 1165 aaKnown RBP16.32■□□□□ 0.2
TSPAN4-208ENST00000409531 NOVA1P51513 510 aaKnown RBP16.32■□□□□ 0.2
TSPAN4-208ENST00000409531 GTF2H3Q13889 308 aa16.32■□□□□ 0.2
TSPAN4-208ENST00000409531 SEMA3AQ14563 771 aa16.32■□□□□ 0.2
TSPAN4-208ENST00000409531 NFATC4Q14934 902 aa16.32■□□□□ 0.2
TSPAN4-208ENST00000409531 PRAMEF14Q5SWL7 426 aa16.32■□□□□ 0.2
TSPAN4-208ENST00000409531 PACS1Q6VY07 963 aa16.32■□□□□ 0.2
TSPAN4-208ENST00000409531 Q6ZSR6 202 aa16.32■□□□□ 0.2
TSPAN4-208ENST00000409531 DENND6AQ8IWF6 608 aa16.32■□□□□ 0.2
TSPAN4-208ENST00000409531 PPM1NQ8N819 430 aa16.32■□□□□ 0.2
TSPAN4-208ENST00000409531 UHMK1Q8TAS1 419 aaKnown RBP16.32■□□□□ 0.2
TSPAN4-208ENST00000409531 FUBP1Q96AE4 644 aaKnown RBP16.32■□□□□ 0.2
TSPAN4-208ENST00000409531 CLPBQ9H078 707 aa16.32■□□□□ 0.2
TSPAN4-208ENST00000409531 FETUBQ9UGM5 382 aa16.32■□□□□ 0.2
TSPAN4-208ENST00000409531 TMPRSS11EQ9UL52 423 aa16.32■□□□□ 0.2
TSPAN4-208ENST00000409531 CORO1CQ9ULV4 474 aaPredicted RBP16.32■□□□□ 0.2
TSPAN4-208ENST00000409531 EPG5Q9HCE0 2579 aa16.31■□□□□ 0.2
TSPAN4-208ENST00000409531 A0A1B0GTQ1 180 aa16.31■□□□□ 0.2
TSPAN4-208ENST00000409531 PRMT5O14744 637 aaPredicted RBP16.31■□□□□ 0.2
TSPAN4-208ENST00000409531 SH3BP5O60239 455 aa16.31■□□□□ 0.2
TSPAN4-208ENST00000409531 PCDHGA12O60330 932 aa16.31■□□□□ 0.2
TSPAN4-208ENST00000409531 ASMTLO95671 621 aa16.31■□□□□ 0.2
TSPAN4-208ENST00000409531 S1PR4O95977 384 aa16.31■□□□□ 0.2
TSPAN4-208ENST00000409531 C1QAP02745 245 aa16.31■□□□□ 0.2
TSPAN4-208ENST00000409531 THEGLP0DJG4 465 aa16.31■□□□□ 0.2
TSPAN4-208ENST00000409531 GP5P40197 560 aa16.31■□□□□ 0.2
TSPAN4-208ENST00000409531 CCT8P50990 548 aa16.31■□□□□ 0.2
TSPAN4-208ENST00000409531 CSE1LP55060 971 aaKnown RBP16.31■□□□□ 0.2
TSPAN4-208ENST00000409531 ADARP55265 1226 aaKnown RBP16.31■□□□□ 0.2
TSPAN4-208ENST00000409531 TMEM115Q12893 351 aaPredicted RBP16.31■□□□□ 0.2
TSPAN4-208ENST00000409531 UBAP2Q5T6F2 1119 aaKnown RBP16.31■□□□□ 0.2
TSPAN4-208ENST00000409531 STRA8Q7Z7C7 330 aa16.31■□□□□ 0.2
TSPAN4-208ENST00000409531 LDB1Q86U70 411 aaPredicted RBP16.31■□□□□ 0.2
TSPAN4-208ENST00000409531 SPATS2Q86XZ4 545 aaKnown RBP16.31■□□□□ 0.2
TSPAN4-208ENST00000409531 OXR1Q8N573 874 aa16.31■□□□□ 0.2
TSPAN4-208ENST00000409531 DEFB124Q8NES8 71 aa16.31■□□□□ 0.2
TSPAN4-208ENST00000409531 ZNF514Q96K75 400 aaPredicted RBP16.31■□□□□ 0.2
TSPAN4-208ENST00000409531 WDR92Q96MX6 357 aa16.31■□□□□ 0.2
TSPAN4-208ENST00000409531 CCDC68Q9H2F9 335 aa16.31■□□□□ 0.2
TSPAN4-208ENST00000409531 SMYD2Q9NRG4 433 aa16.31■□□□□ 0.2
TSPAN4-208ENST00000409531 PCDHB1Q9Y5F3 818 aa16.31■□□□□ 0.2
TSPAN4-208ENST00000409531 UBA6A0AVT1 1052 aaPredicted RBP16.3■□□□□ 0.2
TSPAN4-208ENST00000409531 CXorf49A8MYA2 514 aaPredicted RBP16.3■□□□□ 0.2
TSPAN4-208ENST00000409531 TNFRSF10CO14798 259 aa16.3■□□□□ 0.2
TSPAN4-208ENST00000409531 CDK14O94921 469 aa16.3■□□□□ 0.2
TSPAN4-208ENST00000409531 AP2A2O94973 939 aa16.3■□□□□ 0.2
TSPAN4-208ENST00000409531 INHBAP08476 426 aa16.3■□□□□ 0.2
TSPAN4-208ENST00000409531 ATP1B2P14415 290 aaPredicted RBP16.3■□□□□ 0.2
TSPAN4-208ENST00000409531 KCNA4P22459 653 aa16.3■□□□□ 0.2
TSPAN4-208ENST00000409531 RPS3P23396 243 aaKnown RBP eCLIP16.3■□□□□ 0.26e-8■■■■■ 37.4
TSPAN4-208ENST00000409531 MSH2P43246 934 aa16.3■□□□□ 0.2
TSPAN4-208ENST00000409531 RXRGP48443 463 aa16.3■□□□□ 0.2
TSPAN4-208ENST00000409531 CD151P48509 253 aa16.3■□□□□ 0.2
TSPAN4-208ENST00000409531 ARRB1P49407 418 aaPredicted RBP16.3■□□□□ 0.2
TSPAN4-208ENST00000409531 EIF3BP55884 814 aaKnown RBP16.3■□□□□ 0.2
TSPAN4-208ENST00000409531 IFFO1Q0D2I5 559 aa16.3■□□□□ 0.2
TSPAN4-208ENST00000409531 PDE1CQ14123 709 aaPredicted RBP16.3■□□□□ 0.2
TSPAN4-208ENST00000409531 GRTP1Q5TC63 336 aa16.3■□□□□ 0.2
TSPAN4-208ENST00000409531 FBXO38Q6PIJ6 1188 aa16.3■□□□□ 0.2
TSPAN4-208ENST00000409531 MACC1Q6ZN28 852 aa16.3■□□□□ 0.2
TSPAN4-208ENST00000409531 TAOK1Q7L7X3 1001 aa16.3■□□□□ 0.2
TSPAN4-208ENST00000409531 TRIM74Q86UV6 250 aa16.3■□□□□ 0.2
TSPAN4-208ENST00000409531 OR13H1Q8NG92 308 aa16.3■□□□□ 0.2
TSPAN4-208ENST00000409531 LPGAT1Q92604 370 aa16.3■□□□□ 0.2
TSPAN4-208ENST00000409531 PAFAH2Q99487 392 aa16.3■□□□□ 0.2
TSPAN4-208ENST00000409531 LGR4Q9BXB1 951 aa16.3■□□□□ 0.2
TSPAN4-208ENST00000409531 OR2AG1Q9H205 316 aa16.3■□□□□ 0.2
TSPAN4-208ENST00000409531 RMI1Q9H9A7 625 aa16.3■□□□□ 0.2
TSPAN4-208ENST00000409531 FBXO6Q9NRD1 293 aaPredicted RBP16.3■□□□□ 0.2
TSPAN4-208ENST00000409531 GPR27Q9NS67 375 aa16.3■□□□□ 0.2
TSPAN4-208ENST00000409531 SLC24A2Q9UI40 661 aa16.3■□□□□ 0.2
TSPAN4-208ENST00000409531 GNPTGQ9UJJ9 305 aa16.3■□□□□ 0.2
TSPAN4-208ENST00000409531 COMMD10Q9Y6G5 202 aa16.3■□□□□ 0.2
TSPAN4-208ENST00000409531 POC1B-GALNT4F8VUJ3 575 aa16.29■□□□□ 0.2
TSPAN4-208ENST00000409531 H3BMM5 538 aa16.29■□□□□ 0.2
TSPAN4-208ENST00000409531 GIPC1O14908 333 aa16.29■□□□□ 0.2
TSPAN4-208ENST00000409531 YKT6O15498 198 aa16.29■□□□□ 0.2
TSPAN4-208ENST00000409531 FLRT2O43155 660 aa16.29■□□□□ 0.2
TSPAN4-208ENST00000409531 MTX2O75431 263 aa16.29■□□□□ 0.2
TSPAN4-208ENST00000409531 AHSGP02765 367 aa16.29■□□□□ 0.2
TSPAN4-208ENST00000409531 ESR1P03372 595 aa16.29■□□□□ 0.2
TSPAN4-208ENST00000409531 CA5AP35218 305 aa16.29■□□□□ 0.2
TSPAN4-208ENST00000409531 SPRP35270 261 aaPredicted RBP16.29■□□□□ 0.2
TSPAN4-208ENST00000409531 SERPINB9P50453 376 aa16.29■□□□□ 0.2
TSPAN4-208ENST00000409531 MPP1Q00013 466 aa16.29■□□□□ 0.2
TSPAN4-208ENST00000409531 EFTUD2Q15029 972 aaKnown RBP eCLIP16.29■□□□□ 0.21e-6■■■■□ 19.4
TSPAN4-208ENST00000409531 DOK6Q6PKX4 331 aa16.29■□□□□ 0.2
TSPAN4-208ENST00000409531 MICALCLQ6ZW33 695 aa16.29■□□□□ 0.2
TSPAN4-208ENST00000409531 ADGRG6Q86SQ4 1221 aa16.29■□□□□ 0.2
TSPAN4-208ENST00000409531 NAXDQ8IW45 347 aa16.29■□□□□ 0.2
TSPAN4-208ENST00000409531 OR56A4Q8NGH8 313 aa16.29■□□□□ 0.2
TSPAN4-208ENST00000409531 SETD7Q8WTS6 366 aaKnown RBP16.29■□□□□ 0.2
TSPAN4-208ENST00000409531 SLC44A1Q8WWI5 657 aa16.29■□□□□ 0.2
TSPAN4-208ENST00000409531 TSSK1BQ9BXA7 367 aa16.29■□□□□ 0.2
TSPAN4-208ENST00000409531 RHOJQ9H4E5 214 aa16.29■□□□□ 0.2
TSPAN4-208ENST00000409531 SLC17A6Q9P2U8 582 aa16.29■□□□□ 0.2
TSPAN4-208ENST00000409531 ATXN10Q9UBB4 475 aa16.29■□□□□ 0.2
TSPAN4-208ENST00000409531 SLC17A4Q9Y2C5 497 aa16.29■□□□□ 0.2
TSPAN4-208ENST00000409531 PSAT1Q9Y617 370 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms