RNA–Protein interactions for RNA: ENST00000398417.6

SMAD4-202, Transcript of SMAD family member 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMAD4, Length 8,495 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-202ENST00000398417 PAGE3Q5JUK9 113 aa4.88□□□□□ -1.63
SMAD4-202ENST00000398417 HECTD3Q5T447 861 aa4.88□□□□□ -1.63
SMAD4-202ENST00000398417 ARMC12Q5T9G4 340 aa4.88□□□□□ -1.63
SMAD4-202ENST00000398417 RASAL3Q86YV0 1011 aa4.88□□□□□ -1.63
SMAD4-202ENST00000398417 UMODL1-AS1Q8N2C9 162 aa4.88□□□□□ -1.63
SMAD4-202ENST00000398417 DBF4BQ8NFT6 615 aa4.88□□□□□ -1.63
SMAD4-202ENST00000398417 SH3RF2Q8TEC5 729 aa4.88□□□□□ -1.63
SMAD4-202ENST00000398417 DGCR6LQ9BY27 220 aa4.88□□□□□ -1.63
SMAD4-202ENST00000398417 COMMD8Q9NX08 183 aa4.88□□□□□ -1.63
SMAD4-202ENST00000398417 RAD51BO15315 384 aa4.88□□□□□ -1.63
SMAD4-202ENST00000398417 TBC1D4O60343 1298 aa4.88□□□□□ -1.63
SMAD4-202ENST00000398417 FAM20BO75063 409 aa4.88□□□□□ -1.63
SMAD4-202ENST00000398417 TFAP2AP05549 437 aa4.88□□□□□ -1.63
SMAD4-202ENST00000398417 ZNF7P17097 686 aaPredicted RBP4.88□□□□□ -1.63
SMAD4-202ENST00000398417 LPOP22079 712 aaPredicted RBP4.88□□□□□ -1.63
SMAD4-202ENST00000398417 CORO1AP31146 461 aaKnown RBP4.88□□□□□ -1.63
SMAD4-202ENST00000398417 ARCN1P48444 511 aaKnown RBP4.88□□□□□ -1.63
SMAD4-202ENST00000398417 ATP4BP51164 291 aa4.88□□□□□ -1.63
SMAD4-202ENST00000398417 LCP2Q13094 533 aa4.88□□□□□ -1.63
SMAD4-202ENST00000398417 SIM2Q14190 667 aaPredicted RBP4.88□□□□□ -1.63
SMAD4-202ENST00000398417 C11orf91Q3C1V1 193 aa4.88□□□□□ -1.63
SMAD4-202ENST00000398417 FAM98BQ52LJ0 330 aaKnown RBP4.88□□□□□ -1.63
SMAD4-202ENST00000398417 TMEM207Q6UWW9 146 aa4.88□□□□□ -1.63
SMAD4-202ENST00000398417 GOLGA7Q7Z5G4 137 aa4.88□□□□□ -1.63
SMAD4-202ENST00000398417 AUTS2Q8WXX7 1259 aa4.88□□□□□ -1.63
SMAD4-202ENST00000398417 SCLYQ96I15 445 aa4.88□□□□□ -1.63
SMAD4-202ENST00000398417 ADI1Q9BV57 179 aa4.88□□□□□ -1.63
SMAD4-202ENST00000398417 ACTR8Q9H981 624 aa4.88□□□□□ -1.63
SMAD4-202ENST00000398417 CHCHD3Q9NX63 227 aaKnown RBP4.88□□□□□ -1.63
SMAD4-202ENST00000398417 IKZF3Q9UKT9 509 aa4.88□□□□□ -1.63
SMAD4-202ENST00000398417 TBC1D30Q9Y2I9 924 aa4.88□□□□□ -1.63
SMAD4-202ENST00000398417 SZT2Q5T011 3432 aa4.88□□□□□ -1.63
SMAD4-202ENST00000398417 SYNDIG1LA6NDD5 238 aa4.88□□□□□ -1.63
SMAD4-202ENST00000398417 INSIG1O15503 277 aa4.88□□□□□ -1.63
SMAD4-202ENST00000398417 RTN3O95197 1032 aaPredicted RBP4.88□□□□□ -1.63
SMAD4-202ENST00000398417 SMIM18P0DKX4 95 aa4.88□□□□□ -1.63
SMAD4-202ENST00000398417 HOXB8P17481 243 aaPredicted RBP4.88□□□□□ -1.63
SMAD4-202ENST00000398417 CDH4P55283 916 aa4.88□□□□□ -1.63
SMAD4-202ENST00000398417 BFSP2Q13515 415 aa4.88□□□□□ -1.63
SMAD4-202ENST00000398417 SLC44A4Q53GD3 710 aa4.88□□□□□ -1.63
SMAD4-202ENST00000398417 PIGGQ5H8A4 983 aa4.88□□□□□ -1.63
SMAD4-202ENST00000398417 CACHD1Q5VU97 1274 aa4.88□□□□□ -1.63
SMAD4-202ENST00000398417 TAS1R1Q7RTX1 841 aa4.88□□□□□ -1.63
SMAD4-202ENST00000398417 ZNF598Q86UK7 904 aaKnown RBP4.88□□□□□ -1.63
SMAD4-202ENST00000398417 SERINC5Q86VE9 423 aa4.88□□□□□ -1.63
SMAD4-202ENST00000398417 CILP2Q8IUL8 1156 aa4.88□□□□□ -1.63
SMAD4-202ENST00000398417 LIX1Q8N485 282 aa4.88□□□□□ -1.63
SMAD4-202ENST00000398417 BPIFB6Q8NFQ5 453 aa4.88□□□□□ -1.63
SMAD4-202ENST00000398417 OR4F6Q8NGB9 312 aa4.88□□□□□ -1.63
SMAD4-202ENST00000398417 RAET1EQ8TD07 263 aa4.88□□□□□ -1.63
SMAD4-202ENST00000398417 MYO19Q96H55 970 aa4.88□□□□□ -1.63
SMAD4-202ENST00000398417 GPR78Q96P69 363 aa4.88□□□□□ -1.63
SMAD4-202ENST00000398417 HAPLN3Q96S86 360 aa4.88□□□□□ -1.63
SMAD4-202ENST00000398417 PLGRKTQ9HBL7 147 aa4.88□□□□□ -1.63
SMAD4-202ENST00000398417 NLE1Q9NVX2 485 aaPredicted RBP4.88□□□□□ -1.63
SMAD4-202ENST00000398417 SLC45A1Q9Y2W3 748 aa4.88□□□□□ -1.63
SMAD4-202ENST00000398417 MDC1Q14676 2089 aaKnown RBP4.88□□□□□ -1.63
SMAD4-202ENST00000398417 EFNA1P20827 205 aaPredicted RBP4.88□□□□□ -1.63
SMAD4-202ENST00000398417 PRDX3P30048 256 aaKnown RBP4.88□□□□□ -1.63
SMAD4-202ENST00000398417 SLC7A1P30825 629 aa4.88□□□□□ -1.63
SMAD4-202ENST00000398417 GSSP48637 474 aa4.88□□□□□ -1.63
SMAD4-202ENST00000398417 MAPKAPK2P49137 400 aa4.88□□□□□ -1.63
SMAD4-202ENST00000398417 PSMD7P51665 324 aa4.88□□□□□ -1.63
SMAD4-202ENST00000398417 EEFSECP57772 596 aaKnown RBP4.88□□□□□ -1.63
SMAD4-202ENST00000398417 YBEYP58557 167 aaPredicted RBP4.88□□□□□ -1.63
SMAD4-202ENST00000398417 HERVK_113P63132 956 aa4.88□□□□□ -1.63
SMAD4-202ENST00000398417 AP5B1Q2VPB7 878 aa4.88□□□□□ -1.63
SMAD4-202ENST00000398417 AARS2Q5JTZ9 985 aaKnown RBP4.88□□□□□ -1.63
SMAD4-202ENST00000398417 FIBCD1Q8N539 461 aa4.88□□□□□ -1.63
SMAD4-202ENST00000398417 LKAAEAR1Q8TD35 194 aa4.88□□□□□ -1.63
SMAD4-202ENST00000398417 PRICKLE1Q96MT3 831 aaPredicted RBP4.88□□□□□ -1.63
SMAD4-202ENST00000398417 ERVK-6Q9BXR3 956 aa4.88□□□□□ -1.63
SMAD4-202ENST00000398417 CSNK1G1Q9HCP0 422 aa4.88□□□□□ -1.63
SMAD4-202ENST00000398417 DNMT3LQ9UJW3 386 aa4.88□□□□□ -1.63
SMAD4-202ENST00000398417 MTMR11A4FU01 709 aa4.88□□□□□ -1.63
SMAD4-202ENST00000398417 PRORSD1PA6NEY8 169 aa4.88□□□□□ -1.63
SMAD4-202ENST00000398417 SLC28A1O00337 649 aa4.88□□□□□ -1.63
SMAD4-202ENST00000398417 DENRO43583 198 aaKnown RBP4.88□□□□□ -1.63
SMAD4-202ENST00000398417 GLUD1P00367 558 aa4.88□□□□□ -1.63
SMAD4-202ENST00000398417 IL7RP16871 459 aa4.88□□□□□ -1.63
SMAD4-202ENST00000398417 ARNTP27540 789 aa4.88□□□□□ -1.63
SMAD4-202ENST00000398417 CAPGP40121 348 aa4.88□□□□□ -1.63
SMAD4-202ENST00000398417 RGS4P49798 205 aa4.88□□□□□ -1.63
SMAD4-202ENST00000398417 SMAD3P84022 425 aaKnown RBP4.88□□□□□ -1.63
SMAD4-202ENST00000398417 BCL2L1Q07817 233 aa4.88□□□□□ -1.63
SMAD4-202ENST00000398417 TRAP1Q12931 704 aaKnown RBP4.88□□□□□ -1.63
SMAD4-202ENST00000398417 PARP15Q460N3 678 aa4.88□□□□□ -1.63
SMAD4-202ENST00000398417 UGT3A1Q6NUS8 523 aa4.88□□□□□ -1.63
SMAD4-202ENST00000398417 TXNDC11Q6PKC3 985 aa4.88□□□□□ -1.63
SMAD4-202ENST00000398417 CD300LGQ6UXG3 332 aa4.88□□□□□ -1.63
SMAD4-202ENST00000398417 RD3Q7Z3Z2 195 aa4.88□□□□□ -1.63
SMAD4-202ENST00000398417 SERPINA9Q86WD7 417 aa4.88□□□□□ -1.63
SMAD4-202ENST00000398417 TMEM151AQ8N4L1 468 aa4.88□□□□□ -1.63
SMAD4-202ENST00000398417 ZBTB2Q8N680 514 aa4.88□□□□□ -1.63
SMAD4-202ENST00000398417 TSSK3Q96PN8 268 aa4.88□□□□□ -1.63
SMAD4-202ENST00000398417 TRMOQ9BU70 441 aa4.88□□□□□ -1.63
SMAD4-202ENST00000398417 NOL6Q9H6R4 1146 aaKnown RBP4.88□□□□□ -1.63
SMAD4-202ENST00000398417 LRATO95237 230 aa4.87□□□□□ -1.63
SMAD4-202ENST00000398417 CST1P01037 141 aa4.87□□□□□ -1.63
SMAD4-202ENST00000398417 PSMB9P28065 219 aa4.87□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms