RNA–Protein interactions for RNA: ENST00000397617.7

PTPRD-206, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 5 BASIC

Gene PTPRD, Length 8,248 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-206ENST00000397617 TK2O00142 265 aa5.79□□□□□ -1.48
PTPRD-206ENST00000397617 AOC2O75106 756 aa5.79□□□□□ -1.48
PTPRD-206ENST00000397617 SLCO2B1O94956 709 aa5.79□□□□□ -1.48
PTPRD-206ENST00000397617 ITGB6P18564 788 aa5.79□□□□□ -1.48
PTPRD-206ENST00000397617 IRX5P78411 483 aaPredicted RBP5.79□□□□□ -1.48
PTPRD-206ENST00000397617 CARD16Q5EG05 197 aa5.79□□□□□ -1.48
PTPRD-206ENST00000397617 PITRM1Q5JRX3 1037 aa5.79□□□□□ -1.48
PTPRD-206ENST00000397617 BLOC1S3Q6QNY0 202 aa5.79□□□□□ -1.48
PTPRD-206ENST00000397617 FAM92BQ6ZTR7 304 aa5.79□□□□□ -1.48
PTPRD-206ENST00000397617 MIER2Q8N344 545 aa5.79□□□□□ -1.48
PTPRD-206ENST00000397617 NAF1Q96HR8 494 aaKnown RBP5.79□□□□□ -1.48
PTPRD-206ENST00000397617 CRISPLD1Q9H336 500 aa5.79□□□□□ -1.48
PTPRD-206ENST00000397617 BRF2Q9HAW0 419 aa5.79□□□□□ -1.48
PTPRD-206ENST00000397617 IL26Q9NPH9 171 aa5.79□□□□□ -1.48
PTPRD-206ENST00000397617 ZSCAN32Q9NX65 697 aa5.79□□□□□ -1.48
PTPRD-206ENST00000397617 MAGEL2Q9UJ55 1249 aa5.79□□□□□ -1.48
PTPRD-206ENST00000397617 ITM2BQ9Y287 266 aa5.79□□□□□ -1.48
PTPRD-206ENST00000397617 OARD1Q9Y530 152 aa5.79□□□□□ -1.48
PTPRD-206ENST00000397617 SBK3P0C264 359 aa5.79□□□□□ -1.48
PTPRD-206ENST00000397617 BMP2P12643 396 aa5.79□□□□□ -1.48
PTPRD-206ENST00000397617 CLCNKAP51800 687 aa5.79□□□□□ -1.48
PTPRD-206ENST00000397617 BLMHQ13867 455 aa5.79□□□□□ -1.48
PTPRD-206ENST00000397617 RFTN2Q52LD8 501 aaPredicted RBP5.79□□□□□ -1.48
PTPRD-206ENST00000397617 OTOP3Q7RTS5 596 aa5.79□□□□□ -1.48
PTPRD-206ENST00000397617 KDELC2Q7Z4H8 507 aa5.79□□□□□ -1.48
PTPRD-206ENST00000397617 GPSM1Q86YR5 675 aa5.79□□□□□ -1.48
PTPRD-206ENST00000397617 MYLK4Q86YV6 388 aaPredicted RBP5.79□□□□□ -1.48
PTPRD-206ENST00000397617 PAPD5Q8NDF8 572 aaKnown RBP5.79□□□□□ -1.48
PTPRD-206ENST00000397617 QRFPRQ96P65 431 aa5.79□□□□□ -1.48
PTPRD-206ENST00000397617 RAD21L1Q9H4I0 556 aa5.79□□□□□ -1.48
PTPRD-206ENST00000397617 PLA2G4CQ9UP65 541 aa5.79□□□□□ -1.48
PTPRD-206ENST00000397617 KCNE2Q9Y6J6 123 aa5.79□□□□□ -1.48
PTPRD-206ENST00000397617 SYNJ2BP-COX16A0A087WUM0 186 aa5.79□□□□□ -1.48
PTPRD-206ENST00000397617 C2orf71A6NGG8 1288 aa5.79□□□□□ -1.48
PTPRD-206ENST00000397617 K7EPI3 171 aa5.79□□□□□ -1.48
PTPRD-206ENST00000397617 GRID2O43424 1007 aa5.79□□□□□ -1.48
PTPRD-206ENST00000397617 USP12O75317 370 aa5.79□□□□□ -1.48
PTPRD-206ENST00000397617 CLCN7P51798 805 aa5.79□□□□□ -1.48
PTPRD-206ENST00000397617 LRP8Q14114 963 aa5.79□□□□□ -1.48
PTPRD-206ENST00000397617 ARHGEF7Q14155 803 aa5.79□□□□□ -1.48
PTPRD-206ENST00000397617 TGFBIQ15582 683 aa5.79□□□□□ -1.48
PTPRD-206ENST00000397617 ZNF77Q15935 545 aa5.79□□□□□ -1.48
PTPRD-206ENST00000397617 SAMD14Q8IZD0 417 aaPredicted RBP5.79□□□□□ -1.48
PTPRD-206ENST00000397617 TOR1AIP2Q8NFQ8 470 aa5.79□□□□□ -1.48
PTPRD-206ENST00000397617 OR7D4Q8NG98 312 aa5.79□□□□□ -1.48
PTPRD-206ENST00000397617 SHKBP1Q8TBC3 707 aa5.79□□□□□ -1.48
PTPRD-206ENST00000397617 BLOC1S5Q8TDH9 187 aa5.79□□□□□ -1.48
PTPRD-206ENST00000397617 FUBP1Q96AE4 644 aaKnown RBP5.79□□□□□ -1.48
PTPRD-206ENST00000397617 PBXIP1Q96AQ6 731 aa5.79□□□□□ -1.48
PTPRD-206ENST00000397617 FBXL8Q96CD0 374 aa5.79□□□□□ -1.48
PTPRD-206ENST00000397617 CD248Q9HCU0 757 aa5.79□□□□□ -1.48
PTPRD-206ENST00000397617 COX16Q9P0S2 106 aa5.79□□□□□ -1.48
PTPRD-206ENST00000397617 THEGQ9P2T0 379 aa5.79□□□□□ -1.48
PTPRD-206ENST00000397617 GLYATL1P3A0A0U1RQE8 302 aa5.79□□□□□ -1.48
PTPRD-206ENST00000397617 GFYI3L273 518 aa5.79□□□□□ -1.48
PTPRD-206ENST00000397617 DIAPH2O60879 1101 aa5.79□□□□□ -1.48
PTPRD-206ENST00000397617 PSMG1O95456 288 aa5.79□□□□□ -1.48
PTPRD-206ENST00000397617 SEC24AO95486 1093 aa5.79□□□□□ -1.48
PTPRD-206ENST00000397617 GNAZP19086 355 aa5.79□□□□□ -1.48
PTPRD-206ENST00000397617 SPINT3P49223 89 aa5.79□□□□□ -1.48
PTPRD-206ENST00000397617 IDH3AP50213 366 aa5.79□□□□□ -1.48
PTPRD-206ENST00000397617 TEKQ02763 1124 aa5.79□□□□□ -1.48
PTPRD-206ENST00000397617 LIPJQ5W064 366 aa5.79□□□□□ -1.48
PTPRD-206ENST00000397617 DHDDSQ86SQ9 333 aa5.79□□□□□ -1.48
PTPRD-206ENST00000397617 PACS2Q86VP3 889 aa5.79□□□□□ -1.48
PTPRD-206ENST00000397617 TBC1D21Q8IYX1 336 aa5.79□□□□□ -1.48
PTPRD-206ENST00000397617 C19orf60Q96EN9 201 aa5.79□□□□□ -1.48
PTPRD-206ENST00000397617 TAS2R7Q9NYW3 318 aa5.79□□□□□ -1.48
PTPRD-206ENST00000397617 DEC1Q9P2X7 70 aa5.79□□□□□ -1.48
PTPRD-206ENST00000397617 PCTPQ9UKL6 214 aa5.79□□□□□ -1.48
PTPRD-206ENST00000397617 POMPQ9Y244 141 aa5.79□□□□□ -1.48
PTPRD-206ENST00000397617 CACNA1IQ9P0X4 2223 aa5.79□□□□□ -1.48
PTPRD-206ENST00000397617 HTR3EA5X5Y0 456 aa5.79□□□□□ -1.48
PTPRD-206ENST00000397617 C1QTNF3-AMACRE9PGA6 284 aa5.79□□□□□ -1.48
PTPRD-206ENST00000397617 FXYD1O00168 92 aa5.79□□□□□ -1.48
PTPRD-206ENST00000397617 CBX4O00257 560 aa5.79□□□□□ -1.48
PTPRD-206ENST00000397617 RECQL5O94762 991 aaPredicted RBP5.79□□□□□ -1.48
PTPRD-206ENST00000397617 C8BP07358 591 aa5.79□□□□□ -1.48
PTPRD-206ENST00000397617 MPP1Q00013 466 aa5.79□□□□□ -1.48
PTPRD-206ENST00000397617 SRSF11Q05519 484 aaKnown RBP5.79□□□□□ -1.48
PTPRD-206ENST00000397617 MYBPC3Q14896 1274 aa5.79□□□□□ -1.48
PTPRD-206ENST00000397617 UGT3A2Q3SY77 523 aa5.79□□□□□ -1.48
PTPRD-206ENST00000397617 MTSS1LQ765P7 747 aa5.79□□□□□ -1.48
PTPRD-206ENST00000397617 CAMKMTQ7Z624 323 aa5.79□□□□□ -1.48
PTPRD-206ENST00000397617 DDI1Q8WTU0 396 aa5.79□□□□□ -1.48
PTPRD-206ENST00000397617 SPHK2Q9NRA0 654 aa5.79□□□□□ -1.48
PTPRD-206ENST00000397617 CRLS1Q9UJA2 301 aa5.79□□□□□ -1.48
PTPRD-206ENST00000397617 ITGB1BP2Q9UKP3 347 aa5.79□□□□□ -1.48
PTPRD-206ENST00000397617 CACNA1GO43497 2377 aa5.79□□□□□ -1.48
PTPRD-206ENST00000397617 TRANK1O15050 2925 aa5.79□□□□□ -1.48
PTPRD-206ENST00000397617 J3KR12 359 aa5.79□□□□□ -1.48
PTPRD-206ENST00000397617 NVLO15381 856 aaKnown RBP5.79□□□□□ -1.48
PTPRD-206ENST00000397617 SNX2O60749 519 aa5.79□□□□□ -1.48
PTPRD-206ENST00000397617 ULK1O75385 1050 aa5.79□□□□□ -1.48
PTPRD-206ENST00000397617 RHOBTB1O94844 696 aa5.79□□□□□ -1.48
PTPRD-206ENST00000397617 CDK14O94921 469 aa5.79□□□□□ -1.48
PTPRD-206ENST00000397617 KELP23276 732 aa5.79□□□□□ -1.48
PTPRD-206ENST00000397617 SLC6A12P48065 614 aa5.79□□□□□ -1.48
PTPRD-206ENST00000397617 PPP1R3AQ16821 1122 aa5.79□□□□□ -1.48
PTPRD-206ENST00000397617 ZNF805Q5CZA5 627 aa5.79□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms