RNA–Protein interactions for RNA: ENST00000397101.5

SEC13-205, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 592 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-205ENST00000397101 COQ6Q9Y2Z9 468 aa13.55□□□□□ -0.24
SEC13-205ENST00000397101 NBASA2RRP1 2371 aa13.55□□□□□ -0.24
SEC13-205ENST00000397101 SDK2Q58EX2 2172 aa13.55□□□□□ -0.24
SEC13-205ENST00000397101 LRRK1Q38SD2 2015 aa13.54□□□□□ -0.24
SEC13-205ENST00000397101 IGHV5-10-1A0A0J9YXX1 117 aa13.54□□□□□ -0.24
SEC13-205ENST00000397101 TMEM202A6NGA9 273 aa13.54□□□□□ -0.24
SEC13-205ENST00000397101 B4E171 279 aa13.54□□□□□ -0.24
SEC13-205ENST00000397101 GOLGA8MH3BSY2 632 aa13.54□□□□□ -0.24
SEC13-205ENST00000397101 SEC31AO94979 1220 aaKnown RBP13.54□□□□□ -0.24
SEC13-205ENST00000397101 LIFP15018 202 aa13.54□□□□□ -0.24
SEC13-205ENST00000397101 TSPAN7P41732 249 aa13.54□□□□□ -0.24
SEC13-205ENST00000397101 CSNK1DP48730 415 aa13.54□□□□□ -0.24
SEC13-205ENST00000397101 LIMK2P53671 638 aa13.54□□□□□ -0.24
SEC13-205ENST00000397101 CAV1Q03135 178 aa13.54□□□□□ -0.24
SEC13-205ENST00000397101 NAA30Q147X3 362 aaPredicted RBP13.54□□□□□ -0.24
SEC13-205ENST00000397101 RALGPS1Q5JS13 557 aa13.54□□□□□ -0.24
SEC13-205ENST00000397101 DNAAF3Q8N9W5 541 aa13.54□□□□□ -0.24
SEC13-205ENST00000397101 AGBL5Q8NDL9 886 aa13.54□□□□□ -0.24
SEC13-205ENST00000397101 ARRDC2Q8TBH0 407 aa13.54□□□□□ -0.24
SEC13-205ENST00000397101 CPT1BQ92523 772 aa13.54□□□□□ -0.24
SEC13-205ENST00000397101 FUBP1Q96AE4 644 aaKnown RBP13.54□□□□□ -0.24
SEC13-205ENST00000397101 MIB2Q96AX9 1013 aa13.54□□□□□ -0.24
SEC13-205ENST00000397101 ZNF641Q96N77 438 aaPredicted RBP13.54□□□□□ -0.24
SEC13-205ENST00000397101 TBL1YQ9BQ87 522 aa13.54□□□□□ -0.24
SEC13-205ENST00000397101 SUV39H2Q9H5I1 410 aa13.54□□□□□ -0.24
SEC13-205ENST00000397101 ATP13A3Q9H7F0 1226 aa13.54□□□□□ -0.24
SEC13-205ENST00000397101 ANKZF1Q9H8Y5 726 aa13.54□□□□□ -0.24
SEC13-205ENST00000397101 LRRC40Q9H9A6 602 aa13.54□□□□□ -0.24
SEC13-205ENST00000397101 RDH14Q9HBH5 336 aa13.54□□□□□ -0.24
SEC13-205ENST00000397101 FGF22Q9HCT0 170 aa13.54□□□□□ -0.24
SEC13-205ENST00000397101 PCDH12Q9NPG4 1184 aa13.54□□□□□ -0.24
SEC13-205ENST00000397101 MTRF1LQ9UGC7 380 aaKnown RBP13.54□□□□□ -0.24
SEC13-205ENST00000397101 PCDHGC4Q9Y5F7 938 aa13.54□□□□□ -0.24
SEC13-205ENST00000397101 NOTCH2Q04721 2471 aa13.53□□□□□ -0.24
SEC13-205ENST00000397101 ERI2A8K979 691 aaKnown RBP13.53□□□□□ -0.24
SEC13-205ENST00000397101 B4DGG1 531 aa13.53□□□□□ -0.24
SEC13-205ENST00000397101 SMAPO00193 183 aa13.53□□□□□ -0.24
SEC13-205ENST00000397101 PIGNO95427 931 aa13.53□□□□□ -0.24
SEC13-205ENST00000397101 AP2A1O95782 977 aa13.53□□□□□ -0.24
SEC13-205ENST00000397101 PCCBP05166 539 aa13.53□□□□□ -0.24
SEC13-205ENST00000397101 TPSB2P20231 275 aa13.53□□□□□ -0.24
SEC13-205ENST00000397101 SERPINA4P29622 427 aa13.53□□□□□ -0.24
SEC13-205ENST00000397101 MMP12P39900 470 aa13.53□□□□□ -0.24
SEC13-205ENST00000397101 LIG3P49916 1009 aa13.53□□□□□ -0.24
SEC13-205ENST00000397101 EPHB1P54762 984 aa13.53□□□□□ -0.24
SEC13-205ENST00000397101 DRG2P55039 364 aaKnown RBP13.53□□□□□ -0.24
SEC13-205ENST00000397101 WNT3AP56704 352 aa13.53□□□□□ -0.24
SEC13-205ENST00000397101 RAB15P59190 212 aa13.53□□□□□ -0.24
SEC13-205ENST00000397101 PEX6Q13608 980 aa13.53□□□□□ -0.24
SEC13-205ENST00000397101 CUL1Q13616 776 aa13.53□□□□□ -0.24
SEC13-205ENST00000397101 MORF4L2Q15014 288 aa13.53□□□□□ -0.24
SEC13-205ENST00000397101 TCEA2Q15560 299 aa13.53□□□□□ -0.24
SEC13-205ENST00000397101 TRADDQ15628 312 aa13.53□□□□□ -0.24
SEC13-205ENST00000397101 TPSAB1Q15661 275 aa13.53□□□□□ -0.24
SEC13-205ENST00000397101 RNASEH2BQ5TBB1 312 aaKnown RBP13.53□□□□□ -0.24
SEC13-205ENST00000397101 ANKRD22Q5VYY1 191 aa13.53□□□□□ -0.24
SEC13-205ENST00000397101 KCTD16Q68DU8 428 aa13.53□□□□□ -0.24
SEC13-205ENST00000397101 LINC00523Q86TU6 105 aa13.53□□□□□ -0.24
SEC13-205ENST00000397101 CACNA2D3Q8IZS8 1091 aa13.53□□□□□ -0.24
SEC13-205ENST00000397101 SLC25A41Q8N5S1 370 aa13.53□□□□□ -0.24
SEC13-205ENST00000397101 OR4D9Q8NGE8 314 aa13.53□□□□□ -0.24
SEC13-205ENST00000397101 JPH3Q8WXH2 748 aaPredicted RBP13.53□□□□□ -0.24
SEC13-205ENST00000397101 OXNAD1Q96HP4 312 aaPredicted RBP13.53□□□□□ -0.24
SEC13-205ENST00000397101 TEFMQ96QE5 360 aaKnown RBP13.53□□□□□ -0.24
SEC13-205ENST00000397101 APOL2Q9BQE5 337 aa13.53□□□□□ -0.24
SEC13-205ENST00000397101 MLPHQ9BV36 600 aaPredicted RBP13.53□□□□□ -0.24
SEC13-205ENST00000397101 TMEM168Q9H0V1 697 aa13.53□□□□□ -0.24
SEC13-205ENST00000397101 B3GALT1Q9Y5Z6 326 aa13.53□□□□□ -0.24
SEC13-205ENST00000397101 SPTAN1Q13813 2472 aaKnown RBP13.52□□□□□ -0.24
SEC13-205ENST00000397101 TCRBV7S3A2A0A539 114 aa13.52□□□□□ -0.25
SEC13-205ENST00000397101 RAD1O60671 282 aa13.52□□□□□ -0.25
SEC13-205ENST00000397101 AGTP01019 485 aa13.52□□□□□ -0.25
SEC13-205ENST00000397101 MMP2P08253 660 aa13.52□□□□□ -0.25
SEC13-205ENST00000397101 THRAP10827 490 aa13.52□□□□□ -0.25
SEC13-205ENST00000397101 IVDP26440 423 aa13.52□□□□□ -0.25
SEC13-205ENST00000397101 CD1CP29017 333 aa13.52□□□□□ -0.25
SEC13-205ENST00000397101 CARSP49589 748 aaKnown RBP13.52□□□□□ -0.25
SEC13-205ENST00000397101 OR1D5P58170 312 aa13.52□□□□□ -0.25
SEC13-205ENST00000397101 CDK18Q07002 472 aa13.52□□□□□ -0.25
SEC13-205ENST00000397101 KCNJ11Q14654 390 aa13.52□□□□□ -0.25
SEC13-205ENST00000397101 ARMC12Q5T9G4 340 aa13.52□□□□□ -0.25
SEC13-205ENST00000397101 HIBCHQ6NVY1 386 aaPredicted RBP13.52□□□□□ -0.25
SEC13-205ENST00000397101 HOOK3Q86VS8 718 aa13.52□□□□□ -0.25
SEC13-205ENST00000397101 ATCAYQ86WG3 371 aa13.52□□□□□ -0.25
SEC13-205ENST00000397101 CCDC25Q86WR0 208 aa13.52□□□□□ -0.25
SEC13-205ENST00000397101 CAMK1DQ8IU85 385 aa13.52□□□□□ -0.25
SEC13-205ENST00000397101 SFTPA2Q8IWL1 248 aa13.52□□□□□ -0.25
SEC13-205ENST00000397101 NDUFAF2Q8N183 169 aa13.52□□□□□ -0.25
SEC13-205ENST00000397101 NAT8LQ8N9F0 302 aa13.52□□□□□ -0.25
SEC13-205ENST00000397101 RCBTB1Q8NDN9 531 aa13.52□□□□□ -0.25
SEC13-205ENST00000397101 ART4Q93070 314 aa13.52□□□□□ -0.25
SEC13-205ENST00000397101 CCDC74BQ96LY2 380 aa13.52□□□□□ -0.25
SEC13-205ENST00000397101 TUBGCP5Q96RT8 1024 aa13.52□□□□□ -0.25
SEC13-205ENST00000397101 NUDT22Q9BRQ3 303 aa13.52□□□□□ -0.25
SEC13-205ENST00000397101 PARD6BQ9BYG5 372 aa13.52□□□□□ -0.25
SEC13-205ENST00000397101 SPRY4Q9C004 299 aa13.52□□□□□ -0.25
SEC13-205ENST00000397101 LRRC4CQ9HCJ2 640 aa13.52□□□□□ -0.25
SEC13-205ENST00000397101 MRPL40Q9NQ50 206 aaKnown RBP13.52□□□□□ -0.25
SEC13-205ENST00000397101 EIF2B3Q9NR50 452 aaKnown RBP13.52□□□□□ -0.25
SEC13-205ENST00000397101 TRNAU1APQ9NX07 287 aaKnown RBP13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms