RNA–Protein interactions for RNA: ENST00000394331.3

HOXC6-202, Transcript of homeobox C6, humanhuman

TSL 1 (best) BASIC

Gene HOXC6, Length 2,943 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6-202ENST00000394331 LAIR2Q6ISS4 152 aa18.69■□□□□ 0.58
HOXC6-202ENST00000394331 PROSER1Q86XN7 944 aa18.69■□□□□ 0.58
HOXC6-202ENST00000394331 ZNF555Q8NEP9 628 aa18.69■□□□□ 0.58
HOXC6-202ENST00000394331 ACVR1CQ8NER5 493 aa18.69■□□□□ 0.58
HOXC6-202ENST00000394331 TMEM40Q8WWA1 233 aa18.69■□□□□ 0.58
HOXC6-202ENST00000394331 NTAN1Q96AB6 310 aa18.69■□□□□ 0.58
HOXC6-202ENST00000394331 CCDC126Q96EE4 140 aa18.69■□□□□ 0.58
HOXC6-202ENST00000394331 MS4A4AQ96JQ5 239 aa18.69■□□□□ 0.58
HOXC6-202ENST00000394331 MRPL57Q9BQC6 102 aaKnown RBP18.69■□□□□ 0.58
HOXC6-202ENST00000394331 ATP13A2Q9NQ11 1180 aa18.69■□□□□ 0.58
HOXC6-202ENST00000394331 USE1Q9NZ43 259 aa18.69■□□□□ 0.58
HOXC6-202ENST00000394331 ZFC3H1O60293 1989 aaKnown RBP18.69■□□□□ 0.58
HOXC6-202ENST00000394331 A0A0J9YYE9 177 aa18.68■□□□□ 0.58
HOXC6-202ENST00000394331 ERVH48-1M5A8F1 160 aa18.68■□□□□ 0.58
HOXC6-202ENST00000394331 CLDN5O00501 218 aa18.68■□□□□ 0.58
HOXC6-202ENST00000394331 TULP3O75386 442 aa18.68■□□□□ 0.58
HOXC6-202ENST00000394331 VBP1P61758 197 aa18.68■□□□□ 0.58
HOXC6-202ENST00000394331 IL18R1Q13478 541 aa18.68■□□□□ 0.58
HOXC6-202ENST00000394331 IMPG1Q17R60 797 aa18.68■□□□□ 0.58
HOXC6-202ENST00000394331 TYSND1Q2T9J0 566 aa18.68■□□□□ 0.58
HOXC6-202ENST00000394331 CTU2Q2VPK5 515 aaKnown RBP18.68■□□□□ 0.58
HOXC6-202ENST00000394331 SYPL2Q5VXT5 272 aa18.68■□□□□ 0.58
HOXC6-202ENST00000394331 CCSAPQ6IQ19 270 aaPredicted RBP18.68■□□□□ 0.58
HOXC6-202ENST00000394331 VN1R5Q7Z5H4 357 aa18.68■□□□□ 0.58
HOXC6-202ENST00000394331 KCNMB4Q86W47 210 aa18.68■□□□□ 0.58
HOXC6-202ENST00000394331 METTL4Q8N3J2 472 aa18.68■□□□□ 0.58
HOXC6-202ENST00000394331 FAM109AQ8N4B1 249 aa18.68■□□□□ 0.58
HOXC6-202ENST00000394331 MARVELD3Q96A59 401 aa18.68■□□□□ 0.58
HOXC6-202ENST00000394331 LRRC58Q96CX6 371 aa18.68■□□□□ 0.58
HOXC6-202ENST00000394331 MED10Q9BTT4 135 aa18.68■□□□□ 0.58
HOXC6-202ENST00000394331 TOR3AQ9H497 397 aa18.68■□□□□ 0.58
HOXC6-202ENST00000394331 TMPRSS4Q9NRS4 437 aa18.68■□□□□ 0.58
HOXC6-202ENST00000394331 MOSPD1Q9UJG1 213 aa18.68■□□□□ 0.58
HOXC6-202ENST00000394331 IPPQ9Y573 584 aa18.68■□□□□ 0.58
HOXC6-202ENST00000394331 BEST1O76090 585 aa18.68■□□□□ 0.58
HOXC6-202ENST00000394331 NDUFV1P49821 464 aa18.68■□□□□ 0.58
HOXC6-202ENST00000394331 TKTL1P51854 596 aa18.68■□□□□ 0.58
HOXC6-202ENST00000394331 MFSD10Q14728 455 aa18.68■□□□□ 0.58
HOXC6-202ENST00000394331 SMU1Q2TAY7 513 aa18.68■□□□□ 0.58
HOXC6-202ENST00000394331 CLEC20AQ6ZU45 233 aa18.68■□□□□ 0.58
HOXC6-202ENST00000394331 PAQR9Q6ZVX9 377 aa18.68■□□□□ 0.58
HOXC6-202ENST00000394331 GDPD3Q7L5L3 318 aa18.68■□□□□ 0.58
HOXC6-202ENST00000394331 TSPEARQ8WU66 669 aa18.68■□□□□ 0.58
HOXC6-202ENST00000394331 TMEM125Q96AQ2 219 aa18.68■□□□□ 0.58
HOXC6-202ENST00000394331 NXNL1Q96CM4 212 aa18.68■□□□□ 0.58
HOXC6-202ENST00000394331 LRCH3Q96II8 777 aa18.68■□□□□ 0.58
HOXC6-202ENST00000394331 COQ7Q99807 217 aa18.68■□□□□ 0.58
HOXC6-202ENST00000394331 PIGVQ9NUD9 493 aa18.68■□□□□ 0.58
HOXC6-202ENST00000394331 DDX28Q9NUL7 540 aaKnown RBP18.68■□□□□ 0.58
HOXC6-202ENST00000394331 BFARQ9NZS9 450 aa18.68■□□□□ 0.58
HOXC6-202ENST00000394331 INTS6Q9UL03 887 aaKnown RBP18.68■□□□□ 0.58
HOXC6-202ENST00000394331 ACOT9Q9Y305 439 aa18.68■□□□□ 0.58
HOXC6-202ENST00000394331 SPEF1Q9Y4P9 236 aa18.68■□□□□ 0.58
HOXC6-202ENST00000394331 APOA1P02647 267 aa18.67■□□□□ 0.58
HOXC6-202ENST00000394331 ETV3P41162 512 aa18.67■□□□□ 0.58
HOXC6-202ENST00000394331 HCAR3P49019 387 aa18.67■□□□□ 0.58
HOXC6-202ENST00000394331 AP2S1P53680 142 aaPredicted RBP18.67■□□□□ 0.58
HOXC6-202ENST00000394331 EEFSECP57772 596 aaKnown RBP18.67■□□□□ 0.58
HOXC6-202ENST00000394331 CD47Q08722 323 aa18.67■□□□□ 0.58
HOXC6-202ENST00000394331 MEP1AQ16819 746 aa18.67■□□□□ 0.58
HOXC6-202ENST00000394331 ZNF404Q494X3 552 aa18.67■□□□□ 0.58
HOXC6-202ENST00000394331 C9orf131Q5VYM1 1079 aa18.67■□□□□ 0.58
HOXC6-202ENST00000394331 TXNDC5Q8NBS9 432 aaKnown RBP18.67■□□□□ 0.58
HOXC6-202ENST00000394331 NETO2Q8NC67 525 aa18.67■□□□□ 0.58
HOXC6-202ENST00000394331 ALG2Q9H553 416 aa18.67■□□□□ 0.58
HOXC6-202ENST00000394331 SRCAPQ6ZRS2 3230 aa18.67■□□□□ 0.58
HOXC6-202ENST00000394331 CLDN24A6NM45 220 aa18.67■□□□□ 0.58
HOXC6-202ENST00000394331 ANGPT2O15123 496 aa18.67■□□□□ 0.58
HOXC6-202ENST00000394331 MRPS14O60783 128 aaKnown RBP18.67■□□□□ 0.58
HOXC6-202ENST00000394331 MATN4O95460 622 aa18.67■□□□□ 0.58
HOXC6-202ENST00000394331 AP2A1O95782 977 aa18.67■□□□□ 0.58
HOXC6-202ENST00000394331 NAGAP17050 411 aa18.67■□□□□ 0.58
HOXC6-202ENST00000394331 ERCC2P18074 760 aa18.67■□□□□ 0.58
HOXC6-202ENST00000394331 GLRBP48167 497 aa18.67■□□□□ 0.58
HOXC6-202ENST00000394331 GSK3BP49841 420 aa18.67■□□□□ 0.58
HOXC6-202ENST00000394331 SCAPQ12770 1279 aa18.67■□□□□ 0.58
HOXC6-202ENST00000394331 TARDBPQ13148 414 aaKnown RBP eCLIP18.67■□□□□ 0.58
HOXC6-202ENST00000394331 OTUD3Q5T2D3 398 aaPredicted RBP18.67■□□□□ 0.58
HOXC6-202ENST00000394331 HORMAD1Q86X24 394 aa18.67■□□□□ 0.58
HOXC6-202ENST00000394331 ST6GAL2Q96JF0 529 aa18.67■□□□□ 0.58
HOXC6-202ENST00000394331 SPATA17Q96L03 361 aa18.67■□□□□ 0.58
HOXC6-202ENST00000394331 RIPOR3Q96MK2 946 aa18.67■□□□□ 0.58
HOXC6-202ENST00000394331 MBOAT4Q96T53 435 aa18.67■□□□□ 0.58
HOXC6-202ENST00000394331 GON7Q9BXV9 100 aa18.67■□□□□ 0.58
HOXC6-202ENST00000394331 ADPRHL2Q9NX46 363 aa18.67■□□□□ 0.58
HOXC6-202ENST00000394331 ERI2A8K979 691 aaKnown RBP18.67■□□□□ 0.58
HOXC6-202ENST00000394331 KCNK1O00180 336 aa18.67■□□□□ 0.58
HOXC6-202ENST00000394331 GABRDO14764 452 aa18.67■□□□□ 0.58
HOXC6-202ENST00000394331 CNTN5O94779 1100 aa18.67■□□□□ 0.58
HOXC6-202ENST00000394331 RYKP34925 604 aa18.67■□□□□ 0.58
HOXC6-202ENST00000394331 SEPHS1P49903 392 aa18.67■□□□□ 0.58
HOXC6-202ENST00000394331 ZNF135P52742 658 aaPredicted RBP18.67■□□□□ 0.58
HOXC6-202ENST00000394331 CRYBB1P53674 252 aaPredicted RBP18.67■□□□□ 0.58
HOXC6-202ENST00000394331 OR2B6P58173 313 aa18.67■□□□□ 0.58
HOXC6-202ENST00000394331 USP10Q14694 798 aaKnown RBP18.67■□□□□ 0.58
HOXC6-202ENST00000394331 WSCD1Q658N2 575 aa18.67■□□□□ 0.58
HOXC6-202ENST00000394331 NPLOC4Q8TAT6 608 aa18.67■□□□□ 0.58
HOXC6-202ENST00000394331 REXO5Q96IC2 774 aaKnown RBP18.67■□□□□ 0.58
HOXC6-202ENST00000394331 NXF2Q9GZY0 626 aaKnown RBP18.67■□□□□ 0.58
HOXC6-202ENST00000394331 POMKQ9H5K3 350 aa18.67■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms