RNA–Protein interactions for RNA: ENST00000380756.7

DNMT3A-204, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 1 (best)

Gene DNMT3A, Length 4,477 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-204ENST00000380756 SLC24A5Q71RS6 500 aa12.6□□□□□ -0.39
DNMT3A-204ENST00000380756 RNFT2Q96EX2 444 aa12.6□□□□□ -0.39
DNMT3A-204ENST00000380756 PRRC2BQ5JSZ5 2229 aaKnown RBP12.59□□□□□ -0.39
DNMT3A-204ENST00000380756 IGKV6D-21A0A0A0MT36 114 aa12.59□□□□□ -0.39
DNMT3A-204ENST00000380756 FAM72CH0Y354 149 aa12.59□□□□□ -0.39
DNMT3A-204ENST00000380756 SDHDO14521 159 aa12.59□□□□□ -0.39
DNMT3A-204ENST00000380756 PQBP1O60828 265 aaKnown RBP12.59□□□□□ -0.39
DNMT3A-204ENST00000380756 TSPAN19P0C672 248 aa12.59□□□□□ -0.39
DNMT3A-204ENST00000380756 PTGER3P43115 390 aa12.59□□□□□ -0.39
DNMT3A-204ENST00000380756 RFX3P48380 749 aa12.59□□□□□ -0.39
DNMT3A-204ENST00000380756 SFSWAPQ12872 951 aaKnown RBP12.59□□□□□ -0.39
DNMT3A-204ENST00000380756 DAG1Q14118 895 aa12.59□□□□□ -0.39
DNMT3A-204ENST00000380756 BTG3Q14201 252 aaPredicted RBP12.59□□□□□ -0.39
DNMT3A-204ENST00000380756 SETMARQ53H47 684 aaPredicted RBP12.59□□□□□ -0.39
DNMT3A-204ENST00000380756 FAM72AQ5TYM5 149 aa12.59□□□□□ -0.39
DNMT3A-204ENST00000380756 FAM72DQ6L9T8 149 aa12.59□□□□□ -0.39
DNMT3A-204ENST00000380756 FAM72BQ86X60 149 aa12.59□□□□□ -0.39
DNMT3A-204ENST00000380756 HID1Q8IV36 788 aa12.59□□□□□ -0.39
DNMT3A-204ENST00000380756 TMEM209Q96SK2 561 aa12.59□□□□□ -0.39
DNMT3A-204ENST00000380756 NLNQ9BYT8 704 aa12.59□□□□□ -0.39
DNMT3A-204ENST00000380756 NDEL1Q9GZM8 345 aa12.59□□□□□ -0.39
DNMT3A-204ENST00000380756 LIN28AQ9H9Z2 209 aaKnown RBP12.59□□□□□ -0.39
DNMT3A-204ENST00000380756 CLN6Q9NWW5 311 aa12.59□□□□□ -0.39
DNMT3A-204ENST00000380756 KCTD5Q9NXV2 234 aa12.59□□□□□ -0.39
DNMT3A-204ENST00000380756 CRNNQ9UBG3 495 aaPredicted RBP12.59□□□□□ -0.39
DNMT3A-204ENST00000380756 N4BP2Q86UW6 1770 aaPredicted RBP12.59□□□□□ -0.39
DNMT3A-204ENST00000380756 IGKV6-21A0A0C4DH24 114 aa12.59□□□□□ -0.39
DNMT3A-204ENST00000380756 FAM25AB3EWG3 89 aa12.59□□□□□ -0.39
DNMT3A-204ENST00000380756 FAM25CB3EWG5 89 aa12.59□□□□□ -0.39
DNMT3A-204ENST00000380756 FAM25GB3EWG6 89 aa12.59□□□□□ -0.39
DNMT3A-204ENST00000380756 ZNF12P17014 697 aa12.59□□□□□ -0.39
DNMT3A-204ENST00000380756 CORO1AP31146 461 aaKnown RBP12.59□□□□□ -0.39
DNMT3A-204ENST00000380756 ABRQ12979 859 aa12.59□□□□□ -0.39
DNMT3A-204ENST00000380756 CYP2A13Q16696 494 aa12.59□□□□□ -0.39
DNMT3A-204ENST00000380756 ANKRD46Q86W74 232 aa12.59□□□□□ -0.39
DNMT3A-204ENST00000380756 UBASH3BQ8TF42 649 aa12.59□□□□□ -0.39
DNMT3A-204ENST00000380756 CAPSLQ8WWF8 208 aa12.59□□□□□ -0.39
DNMT3A-204ENST00000380756 NSMCE3Q96MG7 304 aa12.59□□□□□ -0.39
DNMT3A-204ENST00000380756 PREBQ9HCU5 417 aa12.59□□□□□ -0.39
DNMT3A-204ENST00000380756 ERGIC3Q9Y282 383 aa12.59□□□□□ -0.39
DNMT3A-204ENST00000380756 TDRKHQ9Y2W6 561 aaKnown RBP12.59□□□□□ -0.39
DNMT3A-204ENST00000380756 GLYATL1P3A0A0U1RQE8 302 aa12.59□□□□□ -0.39
DNMT3A-204ENST00000380756 CLDN9O95484 217 aa12.59□□□□□ -0.39
DNMT3A-204ENST00000380756 ITPKAP23677 461 aa12.59□□□□□ -0.39
DNMT3A-204ENST00000380756 YAP1P46937 504 aaKnown RBP12.59□□□□□ -0.39
DNMT3A-204ENST00000380756 SPIBQ01892 262 aa12.59□□□□□ -0.39
DNMT3A-204ENST00000380756 NIPAL4Q0D2K0 466 aa12.59□□□□□ -0.39
DNMT3A-204ENST00000380756 TLR1Q15399 786 aa12.59□□□□□ -0.39
DNMT3A-204ENST00000380756 MAGEB10Q96LZ2 347 aaPredicted RBP12.59□□□□□ -0.39
DNMT3A-204ENST00000380756 KCNK13Q9HB14 408 aa12.59□□□□□ -0.39
DNMT3A-204ENST00000380756 SPG21Q9NZD8 308 aa12.59□□□□□ -0.39
DNMT3A-204ENST00000380756 GALPQ9UBC7 116 aa12.59□□□□□ -0.39
DNMT3A-204ENST00000380756 DNAJB9Q9UBS3 223 aa12.59□□□□□ -0.39
DNMT3A-204ENST00000380756 ADAM30Q9UKF2 790 aa12.59□□□□□ -0.39
DNMT3A-204ENST00000380756 A0A1B0GVM2 712 aa12.58□□□□□ -0.39
DNMT3A-204ENST00000380756 TTC24A2A3L6 582 aaPredicted RBP12.58□□□□□ -0.39
DNMT3A-204ENST00000380756 TCAF2A6NFQ2 919 aa12.58□□□□□ -0.39
DNMT3A-204ENST00000380756 C9IYK1 514 aa12.58□□□□□ -0.39
DNMT3A-204ENST00000380756 J3KR12 359 aa12.58□□□□□ -0.39
DNMT3A-204ENST00000380756 PIRO00625 290 aa12.58□□□□□ -0.39
DNMT3A-204ENST00000380756 TBX18O95935 607 aa12.58□□□□□ -0.39
DNMT3A-204ENST00000380756 ASLP04424 464 aa12.58□□□□□ -0.39
DNMT3A-204ENST00000380756 RPIAP49247 311 aa12.58□□□□□ -0.39
DNMT3A-204ENST00000380756 GJA9P57773 515 aa12.58□□□□□ -0.39
DNMT3A-204ENST00000380756 PRKCQQ04759 706 aa12.58□□□□□ -0.39
DNMT3A-204ENST00000380756 SMARCB1Q12824 385 aa12.58□□□□□ -0.39
DNMT3A-204ENST00000380756 MED22Q15528 200 aa12.58□□□□□ -0.39
DNMT3A-204ENST00000380756 CEP78Q5JTW2 689 aa12.58□□□□□ -0.39
DNMT3A-204ENST00000380756 TRIM40Q6P9F5 258 aa12.58□□□□□ -0.39
DNMT3A-204ENST00000380756 ANKRD23Q86SG2 305 aa12.58□□□□□ -0.39
DNMT3A-204ENST00000380756 ZNF614Q8N883 585 aa12.58□□□□□ -0.39
DNMT3A-204ENST00000380756 CLP1Q92989 425 aaKnown RBP12.58□□□□□ -0.39
DNMT3A-204ENST00000380756 NACC2Q96BF6 587 aa12.58□□□□□ -0.39
DNMT3A-204ENST00000380756 B3GALT6Q96L58 329 aa12.58□□□□□ -0.39
DNMT3A-204ENST00000380756 TTPALQ9BTX7 342 aa12.58□□□□□ -0.39
DNMT3A-204ENST00000380756 CXCR6O00574 342 aa12.58□□□□□ -0.4
DNMT3A-204ENST00000380756 NIPSNAP2O75323 286 aa12.58□□□□□ -0.4
DNMT3A-204ENST00000380756 SLC6A2P23975 617 aa12.58□□□□□ -0.4
DNMT3A-204ENST00000380756 PGGT1BP53609 377 aa12.58□□□□□ -0.4
DNMT3A-204ENST00000380756 ITGA1P56199 1179 aa12.58□□□□□ -0.4
DNMT3A-204ENST00000380756 SIRPB2Q5JXA9 342 aa12.58□□□□□ -0.4
DNMT3A-204ENST00000380756 TAPT1Q6NXT6 567 aa12.58□□□□□ -0.4
DNMT3A-204ENST00000380756 METTL3Q86U44 580 aaKnown RBP12.58□□□□□ -0.4
DNMT3A-204ENST00000380756 P2RY8Q86VZ1 359 aa12.58□□□□□ -0.4
DNMT3A-204ENST00000380756 MARVELD2Q8N4S9 558 aa12.58□□□□□ -0.4
DNMT3A-204ENST00000380756 EVLQ9UI08 416 aaPredicted RBP12.58□□□□□ -0.4
DNMT3A-204ENST00000380756 VPS4AQ9UN37 437 aa12.58□□□□□ -0.4
DNMT3A-204ENST00000380756 TLR6Q9Y2C9 796 aa12.58□□□□□ -0.4
DNMT3A-204ENST00000380756 ANKDD1BA6NHY2 528 aa12.58□□□□□ -0.4
DNMT3A-204ENST00000380756 KERAO60938 352 aa12.58□□□□□ -0.4
DNMT3A-204ENST00000380756 DUSP11O75319 330 aaKnown RBP12.58□□□□□ -0.4
DNMT3A-204ENST00000380756 RNASEH2AO75792 299 aaKnown RBP12.58□□□□□ -0.4
DNMT3A-204ENST00000380756 EPORP19235 508 aa12.58□□□□□ -0.4
DNMT3A-204ENST00000380756 IL12AP29459 219 aa12.58□□□□□ -0.4
DNMT3A-204ENST00000380756 TUBA4AP68366 448 aa12.58□□□□□ -0.4
DNMT3A-204ENST00000380756 USP41Q3LFD5 358 aa12.58□□□□□ -0.4
DNMT3A-204ENST00000380756 VARS2Q5ST30 1063 aaKnown RBP12.58□□□□□ -0.4
DNMT3A-204ENST00000380756 ERICH5Q6P6B1 374 aa12.58□□□□□ -0.4
DNMT3A-204ENST00000380756 AHSA2Q719I0 299 aa12.58□□□□□ -0.4
DNMT3A-204ENST00000380756 SVOPLQ8N434 492 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms