RNA–Protein interactions for RNA: ENST00000372621.8

CTPS1-202, Transcript of CTP synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTPS1, Length 3,201 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTPS1-202ENST00000372621 ARIH1Q9Y4X5 557 aaPredicted RBP12.61□□□□□ -0.39
CTPS1-202ENST00000372621 PCDHB3Q9Y5E6 796 aa12.61□□□□□ -0.39
CTPS1-202ENST00000372621 F5H5T6 163 aa12.61□□□□□ -0.39
CTPS1-202ENST00000372621 H3BMQ9 156 aa12.61□□□□□ -0.39
CTPS1-202ENST00000372621 VPS26AO75436 327 aa12.61□□□□□ -0.39
CTPS1-202ENST00000372621 TTKP33981 857 aa12.61□□□□□ -0.39
CTPS1-202ENST00000372621 ERVPABLB-1P60509 514 aa12.61□□□□□ -0.39
CTPS1-202ENST00000372621 CTXN3Q4LDR2 81 aa12.61□□□□□ -0.39
CTPS1-202ENST00000372621 SLC2A7Q6PXP3 512 aa12.61□□□□□ -0.39
CTPS1-202ENST00000372621 OR52B6Q8NGF0 335 aa12.61□□□□□ -0.39
CTPS1-202ENST00000372621 RMDN1Q96DB5 314 aa12.61□□□□□ -0.39
CTPS1-202ENST00000372621 SPATA17Q96L03 361 aa12.61□□□□□ -0.39
CTPS1-202ENST00000372621 COG8Q96MW5 612 aa12.61□□□□□ -0.39
CTPS1-202ENST00000372621 CHID1Q9BWS9 393 aa12.61□□□□□ -0.39
CTPS1-202ENST00000372621 SOX17Q9H6I2 414 aaPredicted RBP12.61□□□□□ -0.39
CTPS1-202ENST00000372621 SLC27A5Q9Y2P5 690 aa12.61□□□□□ -0.39
CTPS1-202ENST00000372621 PRG3Q9Y2Y8 225 aaPredicted RBP12.61□□□□□ -0.39
CTPS1-202ENST00000372621 C2orf81A6NN90 581 aa12.6□□□□□ -0.39
CTPS1-202ENST00000372621 H0YAE9 185 aa12.6□□□□□ -0.39
CTPS1-202ENST00000372621 F11P03951 625 aa12.6□□□□□ -0.39
CTPS1-202ENST00000372621 CLCN4P51793 760 aa12.6□□□□□ -0.39
CTPS1-202ENST00000372621 MTA1Q13330 715 aa12.6□□□□□ -0.39
CTPS1-202ENST00000372621 CCSAPQ6IQ19 270 aaPredicted RBP12.6□□□□□ -0.39
CTPS1-202ENST00000372621 PRR23BQ6ZRT6 265 aa12.6□□□□□ -0.39
CTPS1-202ENST00000372621 GPSM1Q86YR5 675 aa12.6□□□□□ -0.39
CTPS1-202ENST00000372621 CROCCP3Q8IVE0 287 aa12.6□□□□□ -0.39
CTPS1-202ENST00000372621 FNDC5Q8NAU1 212 aa12.6□□□□□ -0.39
CTPS1-202ENST00000372621 FNDC8Q8TC99 324 aa12.6□□□□□ -0.39
CTPS1-202ENST00000372621 OSCP1Q8WVF1 389 aa12.6□□□□□ -0.39
CTPS1-202ENST00000372621 LINC01599Q8WXQ3 324 aa12.6□□□□□ -0.39
CTPS1-202ENST00000372621 TRIB2Q92519 343 aa12.6□□□□□ -0.39
CTPS1-202ENST00000372621 CINPQ9BW66 212 aaPredicted RBP12.6□□□□□ -0.39
CTPS1-202ENST00000372621 SPC25Q9HBM1 224 aa12.6□□□□□ -0.39
CTPS1-202ENST00000372621 TRMT13Q9NUP7 481 aaKnown RBP12.6□□□□□ -0.39
CTPS1-202ENST00000372621 RIC8BQ9NVN3 520 aa12.6□□□□□ -0.39
CTPS1-202ENST00000372621 VPS9D1Q9Y2B5 631 aa12.6□□□□□ -0.39
CTPS1-202ENST00000372621 PLXNA4Q9HCM2 1894 aa12.6□□□□□ -0.39
CTPS1-202ENST00000372621 hCG_2014768A0A024R1R8 64 aa12.6□□□□□ -0.39
CTPS1-202ENST00000372621 TMX2-CTNND1H3BSU7 103 aa12.6□□□□□ -0.39
CTPS1-202ENST00000372621 ARNTLO00327 626 aa12.6□□□□□ -0.39
CTPS1-202ENST00000372621 ANKRD28O15084 1053 aa12.6□□□□□ -0.39
CTPS1-202ENST00000372621 KDELR3O43731 214 aa12.6□□□□□ -0.39
CTPS1-202ENST00000372621 SYNCRIPO60506 623 aaKnown RBP12.6□□□□□ -0.39
CTPS1-202ENST00000372621 MT-ND1P03886 318 aa12.6□□□□□ -0.39
CTPS1-202ENST00000372621 CDH1P12830 882 aa12.6□□□□□ -0.39
CTPS1-202ENST00000372621 SOX11P35716 441 aa12.6□□□□□ -0.39
CTPS1-202ENST00000372621 ENTPD1P49961 510 aa12.6□□□□□ -0.39
CTPS1-202ENST00000372621 SCNN1BP51168 640 aa12.6□□□□□ -0.39
CTPS1-202ENST00000372621 IL2P60568 153 aa12.6□□□□□ -0.39
CTPS1-202ENST00000372621 PRKG2Q13237 762 aa12.6□□□□□ -0.39
CTPS1-202ENST00000372621 CBX2Q14781 532 aaPredicted RBP12.6□□□□□ -0.39
CTPS1-202ENST00000372621 KCNA10Q16322 511 aa12.6□□□□□ -0.39
CTPS1-202ENST00000372621 ATP6AP1LQ52LC2 224 aa12.6□□□□□ -0.39
CTPS1-202ENST00000372621 LETMD1Q6P1Q0 360 aa12.6□□□□□ -0.39
CTPS1-202ENST00000372621 SFRP1Q8N474 314 aa12.6□□□□□ -0.39
CTPS1-202ENST00000372621 CDYL2Q8N8U2 506 aa12.6□□□□□ -0.39
CTPS1-202ENST00000372621 LEMD2Q8NC56 503 aa12.6□□□□□ -0.39
CTPS1-202ENST00000372621 PDPRQ8NCN5 879 aa12.6□□□□□ -0.39
CTPS1-202ENST00000372621 KCNJ9Q92806 393 aa12.6□□□□□ -0.39
CTPS1-202ENST00000372621 LINGO1Q96FE5 620 aa12.6□□□□□ -0.39
CTPS1-202ENST00000372621 SEPHS2Q99611 448 aa12.6□□□□□ -0.39
CTPS1-202ENST00000372621 RETREG1Q9H6L5 497 aa12.6□□□□□ -0.39
CTPS1-202ENST00000372621 PLGRKTQ9HBL7 147 aa12.6□□□□□ -0.39
CTPS1-202ENST00000372621 PFDN4Q9NQP4 134 aa12.6□□□□□ -0.39
CTPS1-202ENST00000372621 UBA2Q9UBT2 640 aaPredicted RBP12.6□□□□□ -0.39
CTPS1-202ENST00000372621 SUN2Q9UH99 717 aa12.6□□□□□ -0.39
CTPS1-202ENST00000372621 FKBPLQ9UIM3 349 aa12.6□□□□□ -0.39
CTPS1-202ENST00000372621 TRMT6Q9UJA5 497 aaKnown RBP12.6□□□□□ -0.39
CTPS1-202ENST00000372621 TLR5O60602 858 aa12.6□□□□□ -0.39
CTPS1-202ENST00000372621 LPOP22079 712 aaPredicted RBP12.6□□□□□ -0.39
CTPS1-202ENST00000372621 CASP2P42575 452 aa12.6□□□□□ -0.39
CTPS1-202ENST00000372621 TTPAP49638 278 aa12.6□□□□□ -0.39
CTPS1-202ENST00000372621 HLCSP50747 726 aa12.6□□□□□ -0.39
CTPS1-202ENST00000372621 TGFBIQ15582 683 aa12.6□□□□□ -0.39
CTPS1-202ENST00000372621 GLYATQ6IB77 296 aa12.6□□□□□ -0.39
CTPS1-202ENST00000372621 SLC24A5Q71RS6 500 aa12.6□□□□□ -0.39
CTPS1-202ENST00000372621 DCBLD1Q8N8Z6 715 aa12.6□□□□□ -0.39
CTPS1-202ENST00000372621 HSPBAP1Q96EW2 488 aa12.6□□□□□ -0.39
CTPS1-202ENST00000372621 EXOC2Q96KP1 924 aa12.6□□□□□ -0.39
CTPS1-202ENST00000372621 CNDP2Q96KP4 475 aaKnown RBP12.6□□□□□ -0.39
CTPS1-202ENST00000372621 CDK15Q96Q40 435 aa12.6□□□□□ -0.39
CTPS1-202ENST00000372621 BDH2Q9BUT1 245 aa12.6□□□□□ -0.39
CTPS1-202ENST00000372621 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.6□□□□□ -0.39
CTPS1-202ENST00000372621 MAGEL2Q9UJ55 1249 aa12.6□□□□□ -0.39
CTPS1-202ENST00000372621 PCDHGA11Q9Y5H2 935 aa12.6□□□□□ -0.39
CTPS1-202ENST00000372621 ZFP37Q9Y6Q3 630 aaPredicted RBP12.6□□□□□ -0.39
CTPS1-202ENST00000372621 MTMR11A4FU01 709 aa12.59□□□□□ -0.39
CTPS1-202ENST00000372621 CPNE6O95741 557 aa12.59□□□□□ -0.39
CTPS1-202ENST00000372621 MC4RP32245 332 aa12.59□□□□□ -0.39
CTPS1-202ENST00000372621 KPNA1P52294 538 aaPredicted RBP12.59□□□□□ -0.39
CTPS1-202ENST00000372621 FAM189BP81408 668 aa12.59□□□□□ -0.39
CTPS1-202ENST00000372621 SELPLGQ14242 412 aa12.59□□□□□ -0.39
CTPS1-202ENST00000372621 CCNYL2Q5T2Q4 361 aa12.59□□□□□ -0.39
CTPS1-202ENST00000372621 CST9Q5W186 159 aa12.59□□□□□ -0.39
CTPS1-202ENST00000372621 KCTD8Q6ZWB6 473 aa12.59□□□□□ -0.39
CTPS1-202ENST00000372621 DTWD1Q8N5C7 304 aa12.59□□□□□ -0.39
CTPS1-202ENST00000372621 VPS50Q96JG6 964 aa12.59□□□□□ -0.39
CTPS1-202ENST00000372621 COMMD8Q9NX08 183 aa12.59□□□□□ -0.39
CTPS1-202ENST00000372621 CD274Q9NZQ7 290 aa12.59□□□□□ -0.39
CTPS1-202ENST00000372621 SH3PXD2BA1X283 911 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms