RNA–Protein interactions for RNA: ENST00000356017.8

TRIM13-201, Transcript of tripartite motif containing 13, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TRIM13, Length 1,637 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13-201ENST00000356017 V9GYY5 206 aaPredicted RBP15.33■□□□□ 0.04
TRIM13-201ENST00000356017 OTOGLQ3ZCN5 2332 aa15.33■□□□□ 0.04
TRIM13-201ENST00000356017 TCRBV9S1A1TA0A576 114 aa15.32■□□□□ 0.04
TRIM13-201ENST00000356017 GSTM1P09488 218 aa15.32■□□□□ 0.04
TRIM13-201ENST00000356017 OR56A5P0C7T3 313 aa15.32■□□□□ 0.04
TRIM13-201ENST00000356017 SLC1A2P43004 574 aa15.32■□□□□ 0.04
TRIM13-201ENST00000356017 GPX6P59796 221 aa15.32■□□□□ 0.04
TRIM13-201ENST00000356017 GSTM4Q03013 218 aa15.32■□□□□ 0.04
TRIM13-201ENST00000356017 CTBP1Q13363 440 aa15.32■□□□□ 0.04
TRIM13-201ENST00000356017 SMAD1Q15797 465 aaKnown RBP15.32■□□□□ 0.04
TRIM13-201ENST00000356017 KYNUQ16719 465 aa15.32■□□□□ 0.04
TRIM13-201ENST00000356017 TRMT10BQ6PF06 316 aaKnown RBP15.32■□□□□ 0.04
TRIM13-201ENST00000356017 LVRNQ6Q4G3 990 aa15.32■□□□□ 0.04
TRIM13-201ENST00000356017 CRTC3Q6UUV7 619 aa15.32■□□□□ 0.04
TRIM13-201ENST00000356017 CAPN12Q6ZSI9 719 aa15.32■□□□□ 0.04
TRIM13-201ENST00000356017 MICALCLQ6ZW33 695 aa15.32■□□□□ 0.04
TRIM13-201ENST00000356017 DET1Q7L5Y6 550 aa15.32■□□□□ 0.04
TRIM13-201ENST00000356017 CHST15Q7LFX5 561 aaPredicted RBP15.32■□□□□ 0.04
TRIM13-201ENST00000356017 GALNT7Q86SF2 657 aa15.32■□□□□ 0.04
TRIM13-201ENST00000356017 GKN2Q86XP6 184 aa15.32■□□□□ 0.04
TRIM13-201ENST00000356017 ZNF547Q8IVP9 402 aa15.32■□□□□ 0.04
TRIM13-201ENST00000356017 DENND6AQ8IWF6 608 aa15.32■□□□□ 0.04
TRIM13-201ENST00000356017 CLDN19Q8N6F1 224 aa15.32■□□□□ 0.04
TRIM13-201ENST00000356017 C2CD4AQ8NCU7 369 aaPredicted RBP15.32■□□□□ 0.04
TRIM13-201ENST00000356017 GPBAR1Q8TDU6 330 aa15.32■□□□□ 0.04
TRIM13-201ENST00000356017 LMX1AQ8TE12 382 aa15.32■□□□□ 0.04
TRIM13-201ENST00000356017 FAM122AQ96E09 287 aa15.32■□□□□ 0.04
TRIM13-201ENST00000356017 LINC00615Q96LM1 132 aaPredicted RBP15.32■□□□□ 0.04
TRIM13-201ENST00000356017 TIMM29Q9BSF4 260 aa15.32■□□□□ 0.04
TRIM13-201ENST00000356017 TSSK1BQ9BXA7 367 aa15.32■□□□□ 0.04
TRIM13-201ENST00000356017 TCEAL2Q9H3H9 227 aaPredicted RBP15.32■□□□□ 0.04
TRIM13-201ENST00000356017 PRKAB1Q9Y478 270 aa15.32■□□□□ 0.04
TRIM13-201ENST00000356017 H3BMM5 538 aa15.32■□□□□ 0.04
TRIM13-201ENST00000356017 SCAMP1O15126 338 aa15.32■□□□□ 0.04
TRIM13-201ENST00000356017 OR1I1O60431 355 aa15.32■□□□□ 0.04
TRIM13-201ENST00000356017 SDC3O75056 442 aa15.32■□□□□ 0.04
TRIM13-201ENST00000356017 S1PR4O95977 384 aa15.32■□□□□ 0.04
TRIM13-201ENST00000356017 ESR1P03372 595 aa15.32■□□□□ 0.04
TRIM13-201ENST00000356017 RPS3P23396 243 aaKnown RBP eCLIP15.32■□□□□ 0.04
TRIM13-201ENST00000356017 LEPRP48357 1165 aaKnown RBP15.32■□□□□ 0.04
TRIM13-201ENST00000356017 PRLHRP49683 370 aa15.32■□□□□ 0.04
TRIM13-201ENST00000356017 CTSCP53634 463 aa15.32■□□□□ 0.04
TRIM13-201ENST00000356017 IL9RQ01113 521 aa15.32■□□□□ 0.04
TRIM13-201ENST00000356017 ILF2Q12905 390 aaKnown RBP15.32■□□□□ 0.04
TRIM13-201ENST00000356017 BNIP3Q12983 259 aa15.32■□□□□ 0.04
TRIM13-201ENST00000356017 INSCQ1MX18 579 aa15.32■□□□□ 0.04
TRIM13-201ENST00000356017 INAVAQ3KP66 663 aa15.32■□□□□ 0.04
TRIM13-201ENST00000356017 TEDDM1Q5T9Z0 273 aa15.32■□□□□ 0.04
TRIM13-201ENST00000356017 TRMT10CQ7L0Y3 403 aaKnown RBP15.32■□□□□ 0.04
TRIM13-201ENST00000356017 AMZ2Q86W34 360 aa15.32■□□□□ 0.04
TRIM13-201ENST00000356017 CDC42EP4Q9H3Q1 356 aaKnown RBP15.32■□□□□ 0.04
TRIM13-201ENST00000356017 RXFP3Q9NSD7 469 aa15.32■□□□□ 0.04
TRIM13-201ENST00000356017 GNPTGQ9UJJ9 305 aa15.32■□□□□ 0.04
TRIM13-201ENST00000356017 DOLKQ9UPQ8 538 aa15.32■□□□□ 0.04
TRIM13-201ENST00000356017 PCDHB1Q9Y5F3 818 aa15.32■□□□□ 0.04
TRIM13-201ENST00000356017 RALGAPA1Q6GYQ0 2036 aa15.31■□□□□ 0.04
TRIM13-201ENST00000356017 BPTFQ12830 3046 aa15.31■□□□□ 0.04
TRIM13-201ENST00000356017 C17orf113A0A1B0GUU1 675 aa15.31■□□□□ 0.04
TRIM13-201ENST00000356017 UBA6A0AVT1 1052 aaPredicted RBP15.31■□□□□ 0.04
TRIM13-201ENST00000356017 LMO7DNF2Z398 122 aa15.31■□□□□ 0.04
TRIM13-201ENST00000356017 TPP1O14773 563 aa15.31■□□□□ 0.04
TRIM13-201ENST00000356017 POP7O75817 140 aaKnown RBP15.31■□□□□ 0.04
TRIM13-201ENST00000356017 FTH1P02794 183 aa15.31■□□□□ 0.04
TRIM13-201ENST00000356017 ACP5P13686 325 aa15.31■□□□□ 0.04
TRIM13-201ENST00000356017 VSNL1P62760 191 aa15.31■□□□□ 0.04
TRIM13-201ENST00000356017 CTBSQ01459 385 aa15.31■□□□□ 0.04
TRIM13-201ENST00000356017 C1orf61Q13536 156 aa15.31■□□□□ 0.04
TRIM13-201ENST00000356017 DBX2Q6ZNG2 339 aa15.31■□□□□ 0.04
TRIM13-201ENST00000356017 TAF8Q7Z7C8 310 aa15.31■□□□□ 0.04
TRIM13-201ENST00000356017 SLC26A11Q86WA9 606 aa15.31■□□□□ 0.04
TRIM13-201ENST00000356017 SLC25A45Q8N413 288 aa15.31■□□□□ 0.04
TRIM13-201ENST00000356017 PNPLA1Q8N8W4 532 aa15.31■□□□□ 0.04
TRIM13-201ENST00000356017 LPGAT1Q92604 370 aa15.31■□□□□ 0.04
TRIM13-201ENST00000356017 DUSP23Q9BVJ7 150 aa15.31■□□□□ 0.04
TRIM13-201ENST00000356017 P2RY12Q9H244 342 aa15.31■□□□□ 0.04
TRIM13-201ENST00000356017 CCDC68Q9H2F9 335 aa15.31■□□□□ 0.04
TRIM13-201ENST00000356017 NINJ2Q9NZG7 142 aa15.31■□□□□ 0.04
TRIM13-201ENST00000356017 MGAT4DA6NG13 374 aa15.3■□□□□ 0.04
TRIM13-201ENST00000356017 C4orf47A7E2U8 309 aa15.3■□□□□ 0.04
TRIM13-201ENST00000356017 SGTAO43765 313 aa15.3■□□□□ 0.04
TRIM13-201ENST00000356017 ANXA6P08133 673 aa15.3■□□□□ 0.04
TRIM13-201ENST00000356017 FAM153BP0C7A2 387 aa15.3■□□□□ 0.04
TRIM13-201ENST00000356017 MYBL2P10244 700 aa15.3■□□□□ 0.04
TRIM13-201ENST00000356017 ALPPL2P10696 532 aa15.3■□□□□ 0.04
TRIM13-201ENST00000356017 CLCNKAP51800 687 aa15.3■□□□□ 0.04
TRIM13-201ENST00000356017 LIMK1P53667 647 aa15.3■□□□□ 0.04
TRIM13-201ENST00000356017 PMS2P54278 862 aa15.3■□□□□ 0.04
TRIM13-201ENST00000356017 ARHGAP8P85298 464 aa15.3■□□□□ 0.04
TRIM13-201ENST00000356017 FAM153CQ494X1 144 aa15.3■□□□□ 0.04
TRIM13-201ENST00000356017 STPG1Q5TH74 334 aa15.3■□□□□ 0.04
TRIM13-201ENST00000356017 PTRHD1Q6GMV3 140 aaKnown RBP15.3■□□□□ 0.04
TRIM13-201ENST00000356017 C11orf96Q7Z7L8 435 aa15.3■□□□□ 0.04
TRIM13-201ENST00000356017 GATAD2AQ86YP4 633 aa15.3■□□□□ 0.04
TRIM13-201ENST00000356017 OR2L2Q8NH16 312 aa15.3■□□□□ 0.04
TRIM13-201ENST00000356017 CCDC97Q96F63 343 aaPredicted RBP15.3■□□□□ 0.04
TRIM13-201ENST00000356017 PANX3Q96QZ0 392 aa15.3■□□□□ 0.04
TRIM13-201ENST00000356017 CCM2Q9BSQ5 444 aa15.3■□□□□ 0.04
TRIM13-201ENST00000356017 PARD6BQ9BYG5 372 aa15.3■□□□□ 0.04
TRIM13-201ENST00000356017 FBXO6Q9NRD1 293 aaPredicted RBP15.3■□□□□ 0.04
TRIM13-201ENST00000356017 KLC4Q9NSK0 619 aa15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms