RNA–Protein interactions for RNA: ENST00000343524.9

ATG4A-201, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 2

Gene ATG4A, Length 1,941 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-201ENST00000343524 GAD1Q99259 594 aa8.05□□□□□ -1.12
ATG4A-201ENST00000343524 ZSCAN5AQ9BUG6 496 aa8.05□□□□□ -1.12
ATG4A-201ENST00000343524 C1QTNF1Q9BXJ1 281 aa8.05□□□□□ -1.12
ATG4A-201ENST00000343524 POLR3BQ9NW08 1133 aaPredicted RBP8.05□□□□□ -1.12
ATG4A-201ENST00000343524 TMEM45AQ9NWC5 275 aa8.05□□□□□ -1.12
ATG4A-201ENST00000343524 COMMD8Q9NX08 183 aa8.05□□□□□ -1.12
ATG4A-201ENST00000343524 GLTPQ9NZD2 209 aa8.05□□□□□ -1.12
ATG4A-201ENST00000343524 BFARQ9NZS9 450 aa8.05□□□□□ -1.12
ATG4A-201ENST00000343524 XPR1Q9UBH6 696 aa8.05□□□□□ -1.12
ATG4A-201ENST00000343524 DNAJB9Q9UBS3 223 aa8.05□□□□□ -1.12
ATG4A-201ENST00000343524 AP3M1Q9Y2T2 418 aa8.05□□□□□ -1.12
ATG4A-201ENST00000343524 ACOT9Q9Y305 439 aa8.05□□□□□ -1.12
ATG4A-201ENST00000343524 PCDHA9Q9Y5H5 950 aa8.05□□□□□ -1.12
ATG4A-201ENST00000343524 HTTP42858 3142 aa8.05□□□□□ -1.12
ATG4A-201ENST00000343524 RANBP2P49792 3224 aaKnown RBP8.05□□□□□ -1.12
ATG4A-201ENST00000343524 A0A0G2JMP0 313 aa8.05□□□□□ -1.12
ATG4A-201ENST00000343524 LOC100130705A0A1B0GUX0 176 aa8.05□□□□□ -1.12
ATG4A-201ENST00000343524 LINC00862A6NCI5 91 aa8.05□□□□□ -1.12
ATG4A-201ENST00000343524 ERI2A8K979 691 aaKnown RBP8.05□□□□□ -1.12
ATG4A-201ENST00000343524 TARM1B6A8C7 271 aa8.05□□□□□ -1.12
ATG4A-201ENST00000343524 AIREO43918 545 aa8.05□□□□□ -1.12
ATG4A-201ENST00000343524 DLX3O60479 287 aa8.05□□□□□ -1.12
ATG4A-201ENST00000343524 VPS4BO75351 444 aa8.05□□□□□ -1.12
ATG4A-201ENST00000343524 PDE9AO76083 593 aa8.05□□□□□ -1.12
ATG4A-201ENST00000343524 PDGFAP04085 211 aa8.05□□□□□ -1.12
ATG4A-201ENST00000343524 ARP10275 920 aa8.05□□□□□ -1.12
ATG4A-201ENST00000343524 CD36P16671 472 aa8.05□□□□□ -1.12
ATG4A-201ENST00000343524 GPX3P22352 226 aa8.05□□□□□ -1.12
ATG4A-201ENST00000343524 ALDH4A1P30038 563 aa8.05□□□□□ -1.12
ATG4A-201ENST00000343524 HCAR3P49019 387 aa8.05□□□□□ -1.12
ATG4A-201ENST00000343524 MAPK12P53778 367 aa8.05□□□□□ -1.12
ATG4A-201ENST00000343524 RAB25P57735 213 aa8.05□□□□□ -1.12
ATG4A-201ENST00000343524 ISL1P61371 349 aa8.05□□□□□ -1.12
ATG4A-201ENST00000343524 LSM3P62310 102 aaKnown RBP8.05□□□□□ -1.12
ATG4A-201ENST00000343524 FKBP1BP68106 108 aa8.05□□□□□ -1.12
ATG4A-201ENST00000343524 CCNA1P78396 465 aa8.05□□□□□ -1.12
ATG4A-201ENST00000343524 S100A12P80511 92 aa8.05□□□□□ -1.12
ATG4A-201ENST00000343524 POU5F1BQ06416 359 aa8.05□□□□□ -1.12
ATG4A-201ENST00000343524 KHDRBS1Q07666 443 aaKnown RBP eCLIP8.05□□□□□ -1.12
ATG4A-201ENST00000343524 FAPQ12884 760 aa8.05□□□□□ -1.12
ATG4A-201ENST00000343524 GRIK2Q13002 908 aa8.05□□□□□ -1.12
ATG4A-201ENST00000343524 COL19A1Q14993 1142 aa8.05□□□□□ -1.12
ATG4A-201ENST00000343524 SURF1Q15526 300 aa8.05□□□□□ -1.12
ATG4A-201ENST00000343524 DDR2Q16832 855 aa8.05□□□□□ -1.12
ATG4A-201ENST00000343524 FAM102AQ5T9C2 384 aaPredicted RBP8.05□□□□□ -1.12
ATG4A-201ENST00000343524 SDE2Q6IQ49 451 aa8.05□□□□□ -1.12
ATG4A-201ENST00000343524 ZNF782Q6ZMW2 699 aaPredicted RBP8.05□□□□□ -1.12
ATG4A-201ENST00000343524 KCNMB4Q86W47 210 aa8.05□□□□□ -1.12
ATG4A-201ENST00000343524 ZC3HC1Q86WB0 502 aaKnown RBP8.05□□□□□ -1.12
ATG4A-201ENST00000343524 RIMKLAQ8IXN7 391 aa8.05□□□□□ -1.12
ATG4A-201ENST00000343524 DCP1BQ8IZD4 617 aaKnown RBP8.05□□□□□ -1.12
ATG4A-201ENST00000343524 FSTL5Q8N475 847 aaPredicted RBP8.05□□□□□ -1.12
ATG4A-201ENST00000343524 FAM110BQ8TC76 370 aa8.05□□□□□ -1.12
ATG4A-201ENST00000343524 TMEM125Q96AQ2 219 aa8.05□□□□□ -1.12
ATG4A-201ENST00000343524 SH3KBP1Q96B97 665 aa8.05□□□□□ -1.12
ATG4A-201ENST00000343524 CPB2Q96IY4 423 aa8.05□□□□□ -1.12
ATG4A-201ENST00000343524 HSFY1Q96LI6 401 aa8.05□□□□□ -1.12
ATG4A-201ENST00000343524 MBOAT4Q96T53 435 aa8.05□□□□□ -1.12
ATG4A-201ENST00000343524 DUSP21Q9H596 190 aa8.05□□□□□ -1.12
ATG4A-201ENST00000343524 POMKQ9H5K3 350 aa8.05□□□□□ -1.12
ATG4A-201ENST00000343524 CMTM6Q9NX76 183 aa8.05□□□□□ -1.12
ATG4A-201ENST00000343524 RUVBL2Q9Y230 463 aaKnown RBP8.05□□□□□ -1.12
ATG4A-201ENST00000343524 AFG3L2Q9Y4W6 797 aa8.05□□□□□ -1.12
ATG4A-201ENST00000343524 AUP1Q9Y679 476 aa8.05□□□□□ -1.12
ATG4A-201ENST00000343524 CSNK1G3Q9Y6M4 447 aa8.05□□□□□ -1.12
ATG4A-201ENST00000343524 UNC80Q8N2C7 3258 aa8.05□□□□□ -1.12
ATG4A-201ENST00000343524 ATP6AP2A0A1C7CYW4 349 aa8.04□□□□□ -1.12
ATG4A-201ENST00000343524 E2F8A0AVK6 867 aa8.04□□□□□ -1.12
ATG4A-201ENST00000343524 FAM92AA1XBS5 289 aa8.04□□□□□ -1.12
ATG4A-201ENST00000343524 MEIOCA2RUB1 952 aa8.04□□□□□ -1.12
ATG4A-201ENST00000343524 LEUTXA8MZ59 168 aa8.04□□□□□ -1.12
ATG4A-201ENST00000343524 PTGES3LE9PB15 166 aa8.04□□□□□ -1.12
ATG4A-201ENST00000343524 TRIM77I1YAP6 450 aa8.04□□□□□ -1.12
ATG4A-201ENST00000343524 BCKDKO14874 412 aa8.04□□□□□ -1.12
ATG4A-201ENST00000343524 CPNE3O75131 537 aaKnown RBP8.04□□□□□ -1.12
ATG4A-201ENST00000343524 SEMA3DO95025 777 aa8.04□□□□□ -1.12
ATG4A-201ENST00000343524 CD4P01730 458 aa8.04□□□□□ -1.12
ATG4A-201ENST00000343524 PIGRP01833 764 aa8.04□□□□□ -1.12
ATG4A-201ENST00000343524 C1QBP02746 253 aa8.04□□□□□ -1.12
ATG4A-201ENST00000343524 CYP11A1P05108 521 aa8.04□□□□□ -1.12
ATG4A-201ENST00000343524 DBTP11182 482 aaKnown RBP8.04□□□□□ -1.12
ATG4A-201ENST00000343524 GTF2E2P29084 291 aaKnown RBP8.04□□□□□ -1.12
ATG4A-201ENST00000343524 SDC4P31431 198 aa8.04□□□□□ -1.12
ATG4A-201ENST00000343524 UQCRC1P31930 480 aa8.04□□□□□ -1.12
ATG4A-201ENST00000343524 CD68P34810 354 aaPredicted RBP8.04□□□□□ -1.12
ATG4A-201ENST00000343524 GGT5P36269 586 aa8.04□□□□□ -1.12
ATG4A-201ENST00000343524 GRIA1P42261 906 aa8.04□□□□□ -1.12
ATG4A-201ENST00000343524 MRPL19P49406 292 aaKnown RBP8.04□□□□□ -1.12
ATG4A-201ENST00000343524 FCGRTP55899 365 aa8.04□□□□□ -1.12
ATG4A-201ENST00000343524 SLC35A2P78381 396 aa8.04□□□□□ -1.12
ATG4A-201ENST00000343524 LIPEQ05469 1076 aa8.04□□□□□ -1.12
ATG4A-201ENST00000343524 IKZF1Q13422 519 aa8.04□□□□□ -1.12
ATG4A-201ENST00000343524 NFYCQ13952 458 aa8.04□□□□□ -1.12
ATG4A-201ENST00000343524 KEAP1Q14145 624 aa8.04□□□□□ -1.12
ATG4A-201ENST00000343524 USP10Q14694 798 aaKnown RBP8.04□□□□□ -1.12
ATG4A-201ENST00000343524 LRRC26Q2I0M4 334 aa8.04□□□□□ -1.12
ATG4A-201ENST00000343524 CTU2Q2VPK5 515 aaKnown RBP8.04□□□□□ -1.12
ATG4A-201ENST00000343524 PITRM1Q5JRX3 1037 aa8.04□□□□□ -1.12
ATG4A-201ENST00000343524 DENND1BQ6P3S1 775 aa8.04□□□□□ -1.12
ATG4A-201ENST00000343524 FAM171BQ6P995 826 aa8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms