RNA–Protein interactions for RNA: ENST00000311943.11

SCFD1-201, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 2,016 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-201ENST00000311943 NAT8LQ8N9F0 302 aa11.85□□□□□ -0.51
SCFD1-201ENST00000311943 RCBTB1Q8NDN9 531 aa11.85□□□□□ -0.51
SCFD1-201ENST00000311943 LKAAEAR1Q8TD35 194 aa11.85□□□□□ -0.51
SCFD1-201ENST00000311943 STYXQ8WUJ0 223 aa11.85□□□□□ -0.51
SCFD1-201ENST00000311943 ZNF592Q92610 1267 aa11.85□□□□□ -0.51
SCFD1-201ENST00000311943 FAM136AQ96C01 138 aa11.85□□□□□ -0.51
SCFD1-201ENST00000311943 ATXN7L3BQ96GX2 97 aa11.85□□□□□ -0.51
SCFD1-201ENST00000311943 TTC25Q96NG3 672 aa11.85□□□□□ -0.51
SCFD1-201ENST00000311943 SERPINB12Q96P63 405 aa11.85□□□□□ -0.51
SCFD1-201ENST00000311943 NUDT22Q9BRQ3 303 aa11.85□□□□□ -0.51
SCFD1-201ENST00000311943 WDR83Q9BRX9 315 aaKnown RBP11.85□□□□□ -0.51
SCFD1-201ENST00000311943 TBC1D10AQ9BXI6 508 aa11.85□□□□□ -0.51
SCFD1-201ENST00000311943 ABCG4Q9H172 646 aa11.85□□□□□ -0.51
SCFD1-201ENST00000311943 TAF4O00268 1085 aa11.84□□□□□ -0.51
SCFD1-201ENST00000311943 MT-CO3P00414 261 aa11.84□□□□□ -0.51
SCFD1-201ENST00000311943 MPOP05164 745 aa11.84□□□□□ -0.51
SCFD1-201ENST00000311943 ADRA1DP25100 572 aa11.84□□□□□ -0.51
SCFD1-201ENST00000311943 PDHA2P29803 388 aa11.84□□□□□ -0.51
SCFD1-201ENST00000311943 CASQ1P31415 396 aa11.84□□□□□ -0.51
SCFD1-201ENST00000311943 SLC19A1P41440 591 aa11.84□□□□□ -0.51
SCFD1-201ENST00000311943 PPP1R7Q15435 360 aa11.84□□□□□ -0.51
SCFD1-201ENST00000311943 IYDQ6PHW0 289 aa11.84□□□□□ -0.51
SCFD1-201ENST00000311943 LVRNQ6Q4G3 990 aa11.84□□□□□ -0.51
SCFD1-201ENST00000311943 ZNF574Q6ZN55 896 aaPredicted RBP11.84□□□□□ -0.51
SCFD1-201ENST00000311943 ZNF438Q7Z4V0 828 aa11.84□□□□□ -0.51
SCFD1-201ENST00000311943 SNX20Q7Z614 316 aa11.84□□□□□ -0.51
SCFD1-201ENST00000311943 RAVER1Q8IY67 606 aaKnown RBP11.84□□□□□ -0.51
SCFD1-201ENST00000311943 SFRP1Q8N474 314 aa11.84□□□□□ -0.51
SCFD1-201ENST00000311943 LMNTD1Q8N9Z9 388 aa11.84□□□□□ -0.51
SCFD1-201ENST00000311943 GPR150Q8NGU9 434 aa11.84□□□□□ -0.51
SCFD1-201ENST00000311943 OR6P1Q8NGX9 317 aa11.84□□□□□ -0.51
SCFD1-201ENST00000311943 UBE2Q2Q8WVN8 375 aa11.84□□□□□ -0.51
SCFD1-201ENST00000311943 SCG3Q8WXD2 468 aaKnown RBP11.84□□□□□ -0.51
SCFD1-201ENST00000311943 SEMA6CQ9H3T2 930 aa11.84□□□□□ -0.51
SCFD1-201ENST00000311943 TREX1Q9NSU2 369 aa11.84□□□□□ -0.51
SCFD1-201ENST00000311943 SLC17A6Q9P2U8 582 aa11.84□□□□□ -0.51
SCFD1-201ENST00000311943 CLCA2Q9UQC9 943 aa11.84□□□□□ -0.51
SCFD1-201ENST00000311943 PCDHGA1Q9Y5H4 931 aa11.84□□□□□ -0.51
SCFD1-201ENST00000311943 SLC30A1Q9Y6M5 507 aa11.84□□□□□ -0.51
SCFD1-201ENST00000311943 TRBV5-4A0A0C4DH59 114 aa11.84□□□□□ -0.51
SCFD1-201ENST00000311943 ERI2A8K979 691 aaKnown RBP11.84□□□□□ -0.51
SCFD1-201ENST00000311943 PDZK1P1A8MUH7 402 aa11.84□□□□□ -0.51
SCFD1-201ENST00000311943 CES2O00748 559 aa11.84□□□□□ -0.51
SCFD1-201ENST00000311943 PSMD3O43242 534 aa11.84□□□□□ -0.51
SCFD1-201ENST00000311943 PIAS1O75925 651 aa11.84□□□□□ -0.51
SCFD1-201ENST00000311943 PYGLP06737 847 aa11.84□□□□□ -0.51
SCFD1-201ENST00000311943 MSH3P20585 1137 aa11.84□□□□□ -0.51
SCFD1-201ENST00000311943 ACRV1P26436 265 aa11.84□□□□□ -0.51
SCFD1-201ENST00000311943 CSF2RBP32927 897 aa11.84□□□□□ -0.51
SCFD1-201ENST00000311943 PREPP48147 710 aa11.84□□□□□ -0.51
SCFD1-201ENST00000311943 PGGT1BP53609 377 aa11.84□□□□□ -0.51
SCFD1-201ENST00000311943 CSE1LP55060 971 aaKnown RBP11.84□□□□□ -0.51
SCFD1-201ENST00000311943 SHC2P98077 582 aa11.84□□□□□ -0.51
SCFD1-201ENST00000311943 ITGA9Q13797 1035 aa11.84□□□□□ -0.51
SCFD1-201ENST00000311943 RNASEH2BQ5TBB1 312 aaKnown RBP11.84□□□□□ -0.51
SCFD1-201ENST00000311943 CDCP2Q5VXM1 449 aa11.84□□□□□ -0.51
SCFD1-201ENST00000311943 LRRC8BQ6P9F7 803 aa11.84□□□□□ -0.51
SCFD1-201ENST00000311943 FOXR1Q6PIV2 292 aa11.84□□□□□ -0.51
SCFD1-201ENST00000311943 SPRED1Q7Z699 444 aa11.84□□□□□ -0.51
SCFD1-201ENST00000311943 JAMLQ86YT9 394 aa11.84□□□□□ -0.51
SCFD1-201ENST00000311943 SRPK1Q96SB4 655 aaKnown RBP11.84□□□□□ -0.51
SCFD1-201ENST00000311943 PLAC1Q9HBJ0 212 aa11.84□□□□□ -0.51
SCFD1-201ENST00000311943 EIF2B3Q9NR50 452 aaKnown RBP11.84□□□□□ -0.51
SCFD1-201ENST00000311943 HOMER3Q9NSC5 361 aa11.84□□□□□ -0.51
SCFD1-201ENST00000311943 SMOXQ9NWM0 555 aa11.84□□□□□ -0.51
SCFD1-201ENST00000311943 ASIC3Q9UHC3 531 aa11.84□□□□□ -0.51
SCFD1-201ENST00000311943 APPL1Q9UKG1 709 aa11.84□□□□□ -0.51
SCFD1-201ENST00000311943 MSRB2Q9Y3D2 182 aa11.84□□□□□ -0.51
SCFD1-201ENST00000311943 HEATR9A2RTY3 570 aa11.83□□□□□ -0.52
SCFD1-201ENST00000311943 KRT87PA6NCN2 255 aa11.83□□□□□ -0.52
SCFD1-201ENST00000311943 H7C0S8 307 aa11.83□□□□□ -0.52
SCFD1-201ENST00000311943 KMOO15229 486 aa11.83□□□□□ -0.52
SCFD1-201ENST00000311943 VEGFDO43915 354 aa11.83□□□□□ -0.52
SCFD1-201ENST00000311943 CSO75390 466 aaKnown RBP11.83□□□□□ -0.52
SCFD1-201ENST00000311943 VAPBO95292 243 aa11.83□□□□□ -0.52
SCFD1-201ENST00000311943 GLB1P16278 677 aa11.83□□□□□ -0.52
SCFD1-201ENST00000311943 TPSB2P20231 275 aa11.83□□□□□ -0.52
SCFD1-201ENST00000311943 ITGALP20701 1170 aa11.83□□□□□ -0.52
SCFD1-201ENST00000311943 FNTAP49354 379 aa11.83□□□□□ -0.52
SCFD1-201ENST00000311943 PPP1CAP62136 330 aa11.83□□□□□ -0.52
SCFD1-201ENST00000311943 CYP4F3Q08477 520 aa11.83□□□□□ -0.52
SCFD1-201ENST00000311943 TPSAB1Q15661 275 aa11.83□□□□□ -0.52
SCFD1-201ENST00000311943 PDPK2PQ6A1A2 396 aa11.83□□□□□ -0.52
SCFD1-201ENST00000311943 CCNJLQ8IV13 435 aa11.83□□□□□ -0.52
SCFD1-201ENST00000311943 KRT222Q8N1A0 295 aa11.83□□□□□ -0.52
SCFD1-201ENST00000311943 COPS8Q99627 209 aa11.83□□□□□ -0.52
SCFD1-201ENST00000311943 RAD18Q9NS91 495 aa11.83□□□□□ -0.52
SCFD1-201ENST00000311943 CIDEBQ9UHD4 219 aa11.83□□□□□ -0.52
SCFD1-201ENST00000311943 ENTPD2Q9Y5L3 495 aa11.83□□□□□ -0.52
SCFD1-201ENST00000311943 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP11.82□□□□□ -0.52
SCFD1-201ENST00000311943 NTN3O00634 580 aaPredicted RBP11.82□□□□□ -0.52
SCFD1-201ENST00000311943 PPFIA2O75334 1257 aa11.82□□□□□ -0.52
SCFD1-201ENST00000311943 CAPNS1P04632 268 aa11.82□□□□□ -0.52
SCFD1-201ENST00000311943 F3P13726 295 aa11.82□□□□□ -0.52
SCFD1-201ENST00000311943 TYRP1P17643 537 aa11.82□□□□□ -0.52
SCFD1-201ENST00000311943 PSMA3P25788 255 aa11.82□□□□□ -0.52
SCFD1-201ENST00000311943 CD1CP29017 333 aa11.82□□□□□ -0.52
SCFD1-201ENST00000311943 HADHAP40939 763 aa11.82□□□□□ -0.52
SCFD1-201ENST00000311943 MAPK9P45984 424 aa11.82□□□□□ -0.52
SCFD1-201ENST00000311943 CLCNKAP51800 687 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms