RNA–Protein interactions for RNA: ENST00000310301.8

VPS41-202, Transcript of VPS41, HOPS complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS41, Length 5,903 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-202ENST00000310301 STXBP5Q5T5C0 1151 aa8.12□□□□□ -1.11
VPS41-202ENST00000310301 TMPRSS11AQ6ZMR5 421 aa8.12□□□□□ -1.11
VPS41-202ENST00000310301 MON1AQ86VX9 555 aa8.12□□□□□ -1.11
VPS41-202ENST00000310301 CBR4Q8N4T8 237 aa8.12□□□□□ -1.11
VPS41-202ENST00000310301 LPGAT1Q92604 370 aa8.12□□□□□ -1.11
VPS41-202ENST00000310301 FUBP3Q96I24 572 aaKnown RBP eCLIP8.12□□□□□ -1.11
VPS41-202ENST00000310301 ITCHQ96J02 903 aa8.12□□□□□ -1.11
VPS41-202ENST00000310301 CCDC3Q9BQI4 270 aa8.12□□□□□ -1.11
VPS41-202ENST00000310301 RHOBTB2Q9BYZ6 727 aa8.12□□□□□ -1.11
VPS41-202ENST00000310301 RNF38Q9H0F5 515 aa8.12□□□□□ -1.11
VPS41-202ENST00000310301 ABCG8Q9H221 673 aa8.12□□□□□ -1.11
VPS41-202ENST00000310301 CCSER2Q9H7U1 834 aa8.12□□□□□ -1.11
VPS41-202ENST00000310301 PDP1Q9P0J1 537 aaPredicted RBP8.12□□□□□ -1.11
VPS41-202ENST00000310301 SUV39H1O43463 412 aa8.12□□□□□ -1.11
VPS41-202ENST00000310301 ORC5O43913 435 aa8.12□□□□□ -1.11
VPS41-202ENST00000310301 SLC22A3O75751 556 aa8.12□□□□□ -1.11
VPS41-202ENST00000310301 RPN2P04844 631 aa8.12□□□□□ -1.11
VPS41-202ENST00000310301 CTSEP14091 401 aa8.12□□□□□ -1.11
VPS41-202ENST00000310301 ZNF24P17028 368 aa8.12□□□□□ -1.11
VPS41-202ENST00000310301 DGKAP23743 735 aa8.12□□□□□ -1.11
VPS41-202ENST00000310301 MYBPC1Q00872 1141 aa8.12□□□□□ -1.11
VPS41-202ENST00000310301 SLC6A3Q01959 620 aa8.12□□□□□ -1.11
VPS41-202ENST00000310301 C9orf57Q5W0N0 161 aa8.12□□□□□ -1.11
VPS41-202ENST00000310301 EEF1DP3Q658K8 133 aa8.12□□□□□ -1.11
VPS41-202ENST00000310301 AHSA2Q719I0 299 aa8.12□□□□□ -1.11
VPS41-202ENST00000310301 DAW1Q8N136 415 aa8.12□□□□□ -1.11
VPS41-202ENST00000310301 ING5Q8WYH8 240 aa8.12□□□□□ -1.11
VPS41-202ENST00000310301 TRNT1Q96Q11 434 aaKnown RBP8.12□□□□□ -1.11
VPS41-202ENST00000310301 OR52E6Q96RD3 313 aa8.12□□□□□ -1.11
VPS41-202ENST00000310301 NODALQ96S42 347 aa8.12□□□□□ -1.11
VPS41-202ENST00000310301 ACBD6Q9BR61 282 aa8.12□□□□□ -1.11
VPS41-202ENST00000310301 CNPPD1Q9BV87 410 aa8.12□□□□□ -1.11
VPS41-202ENST00000310301 TNKS2Q9H2K2 1166 aa8.12□□□□□ -1.11
VPS41-202ENST00000310301 MAGEE1Q9HCI5 957 aa8.12□□□□□ -1.11
VPS41-202ENST00000310301 GRHL1Q9NZI5 618 aa8.12□□□□□ -1.11
VPS41-202ENST00000310301 NUP98P52948 1817 aa8.12□□□□□ -1.11
VPS41-202ENST00000310301 TCRBV9S1A1TA0A576 114 aa8.12□□□□□ -1.11
VPS41-202ENST00000310301 CHP2O43745 196 aa8.12□□□□□ -1.11
VPS41-202ENST00000310301 MPSTP25325 297 aa8.12□□□□□ -1.11
VPS41-202ENST00000310301 OR1E1P30953 314 aa8.12□□□□□ -1.11
VPS41-202ENST00000310301 NTSP30990 170 aa8.12□□□□□ -1.11
VPS41-202ENST00000310301 PRKCIP41743 596 aa8.12□□□□□ -1.11
VPS41-202ENST00000310301 SLC12A3P55017 1021 aa8.12□□□□□ -1.11
VPS41-202ENST00000310301 MXD1Q05195 221 aa8.12□□□□□ -1.11
VPS41-202ENST00000310301 SLC1A5Q15758 541 aa8.12□□□□□ -1.11
VPS41-202ENST00000310301 ATP13A4Q4VNC1 1196 aa8.12□□□□□ -1.11
VPS41-202ENST00000310301 MIIPQ5JXC2 388 aa8.12□□□□□ -1.11
VPS41-202ENST00000310301 GLYATQ6IB77 296 aa8.12□□□□□ -1.11
VPS41-202ENST00000310301 CXorf57Q6NSI4 855 aaKnown RBP8.12□□□□□ -1.11
VPS41-202ENST00000310301 GPRIN3Q6ZVF9 776 aa8.12□□□□□ -1.11
VPS41-202ENST00000310301 GPR65Q8IYL9 337 aa8.12□□□□□ -1.11
VPS41-202ENST00000310301 SPATA20Q8TB22 786 aa8.12□□□□□ -1.11
VPS41-202ENST00000310301 TMCO6Q96DC7 493 aa8.12□□□□□ -1.11
VPS41-202ENST00000310301 ZBTB45Q96K62 511 aaPredicted RBP8.12□□□□□ -1.11
VPS41-202ENST00000310301 VAT1Q99536 393 aa8.12□□□□□ -1.11
VPS41-202ENST00000310301 CADM1Q9BY67 442 aaKnown RBP8.12□□□□□ -1.11
VPS41-202ENST00000310301 CHIAQ9BZP6 476 aa8.12□□□□□ -1.11
VPS41-202ENST00000310301 PDZD7Q9H5P4 517 aa8.12□□□□□ -1.11
VPS41-202ENST00000310301 ELL3Q9HB65 397 aaPredicted RBP8.12□□□□□ -1.11
VPS41-202ENST00000310301 XPR1Q9UBH6 696 aa8.12□□□□□ -1.11
VPS41-202ENST00000310301 SLC27A5Q9Y2P5 690 aa8.12□□□□□ -1.11
VPS41-202ENST00000310301 IRGMA1A4Y4 181 aa8.11□□□□□ -1.11
VPS41-202ENST00000310301 AP3D1O14617 1153 aa8.11□□□□□ -1.11
VPS41-202ENST00000310301 AZIN1O14977 448 aa8.11□□□□□ -1.11
VPS41-202ENST00000310301 PSMA1P25786 263 aaKnown RBP8.11□□□□□ -1.11
VPS41-202ENST00000310301 RPL4P36578 427 aaKnown RBP8.11□□□□□ -1.11
VPS41-202ENST00000310301 CLCN5P51795 746 aa8.11□□□□□ -1.11
VPS41-202ENST00000310301 MBTD1Q05BQ5 628 aa8.11□□□□□ -1.11
VPS41-202ENST00000310301 AP5B1Q2VPB7 878 aa8.11□□□□□ -1.11
VPS41-202ENST00000310301 MPPE1Q53F39 396 aa8.11□□□□□ -1.11
VPS41-202ENST00000310301 CCNYL2Q5T2Q4 361 aa8.11□□□□□ -1.11
VPS41-202ENST00000310301 DEFB106AQ8N104 65 aa8.11□□□□□ -1.11
VPS41-202ENST00000310301 NKAPQ8N5F7 415 aaKnown RBP8.11□□□□□ -1.11
VPS41-202ENST00000310301 LZTR1Q8N653 840 aa8.11□□□□□ -1.11
VPS41-202ENST00000310301 MAB21L3Q8N8X9 362 aa8.11□□□□□ -1.11
VPS41-202ENST00000310301 OR2T12Q8NG77 320 aa8.11□□□□□ -1.11
VPS41-202ENST00000310301 PANX3Q96QZ0 392 aa8.11□□□□□ -1.11
VPS41-202ENST00000310301 PANX1Q96RD7 426 aa8.11□□□□□ -1.11
VPS41-202ENST00000310301 EBNA1BP2Q99848 306 aaKnown RBP8.11□□□□□ -1.11
VPS41-202ENST00000310301 ZCCHC2Q9C0B9 1178 aaKnown RBP8.11□□□□□ -1.11
VPS41-202ENST00000310301 PREBQ9HCU5 417 aa8.11□□□□□ -1.11
VPS41-202ENST00000310301 MTPAPQ9NVV4 582 aaKnown RBP eCLIP8.11□□□□□ -1.11
VPS41-202ENST00000310301 CUEDC1Q9NWM3 386 aaPredicted RBP8.11□□□□□ -1.11
VPS41-202ENST00000310301 DNAJC28Q9NX36 388 aa8.11□□□□□ -1.11
VPS41-202ENST00000310301 ZFP37Q9Y6Q3 630 aaPredicted RBP8.11□□□□□ -1.11
VPS41-202ENST00000310301 UBR2Q8IWV8 1755 aa8.11□□□□□ -1.11
VPS41-202ENST00000310301 SCN7AQ01118 1682 aa8.11□□□□□ -1.11
VPS41-202ENST00000310301 ALOX15BO15296 676 aa8.11□□□□□ -1.11
VPS41-202ENST00000310301 B4GALT5O43286 388 aa8.11□□□□□ -1.11
VPS41-202ENST00000310301 APOL3O95236 402 aa8.11□□□□□ -1.11
VPS41-202ENST00000310301 TGDSO95455 350 aa8.11□□□□□ -1.11
VPS41-202ENST00000310301 HIST1H2ABP04908 130 aa8.11□□□□□ -1.11
VPS41-202ENST00000310301 FAM163BP0C2L3 166 aa8.11□□□□□ -1.11
VPS41-202ENST00000310301 BMP7P18075 431 aa8.11□□□□□ -1.11
VPS41-202ENST00000310301 CCNCP24863 283 aa8.11□□□□□ -1.11
VPS41-202ENST00000310301 ALDH3A2P51648 485 aa8.11□□□□□ -1.11
VPS41-202ENST00000310301 RAPSNQ13702 412 aa8.11□□□□□ -1.11
VPS41-202ENST00000310301 FBXL19Q6PCT2 694 aa8.11□□□□□ -1.11
VPS41-202ENST00000310301 HIST3H2AQ7L7L0 130 aa8.11□□□□□ -1.11
VPS41-202ENST00000310301 SIAH1Q8IUQ4 282 aa8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms