RNA–Protein interactions for RNA: ENST00000225742.13

SMARCD2-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 1 (best) BASIC

Gene SMARCD2, Length 1,800 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-201ENST00000225742 RHOAP61586 193 aa21.73■■□□□ 1.07
SMARCD2-201ENST00000225742 TAF12Q16514 161 aa21.73■■□□□ 1.07
SMARCD2-201ENST00000225742 ATP6AP1LQ52LC2 224 aa21.73■■□□□ 1.07
SMARCD2-201ENST00000225742 NHSL2Q5HYW2 709 aa21.73■■□□□ 1.07
SMARCD2-201ENST00000225742 C6orf136Q5SQH8 315 aa21.73■■□□□ 1.07
SMARCD2-201ENST00000225742 B3GNT6Q6ZMB0 384 aa21.73■■□□□ 1.07
SMARCD2-201ENST00000225742 DPP10Q8N608 796 aa21.73■■□□□ 1.07
SMARCD2-201ENST00000225742 PAPD5Q8NDF8 572 aaKnown RBP21.73■■□□□ 1.07
SMARCD2-201ENST00000225742 TSPAN14Q8NG11 270 aa21.73■■□□□ 1.07
SMARCD2-201ENST00000225742 ZNF461Q8TAF7 563 aa21.73■■□□□ 1.07
SMARCD2-201ENST00000225742 BPIFA1Q9NP55 256 aa21.73■■□□□ 1.07
SMARCD2-201ENST00000225742 GMPR2Q9P2T1 348 aaKnown RBP21.73■■□□□ 1.07
SMARCD2-201ENST00000225742 LOC101059915A0A1B0GWI6 518 aaPredicted RBP21.72■■□□□ 1.07
SMARCD2-201ENST00000225742 H0Y626 953 aa21.72■■□□□ 1.07
SMARCD2-201ENST00000225742 H3BNH8 94 aa21.72■■□□□ 1.07
SMARCD2-201ENST00000225742 OR6B1O95007 311 aa21.72■■□□□ 1.07
SMARCD2-201ENST00000225742 OR4F21O95013 312 aa21.72■■□□□ 1.07
SMARCD2-201ENST00000225742 TUBA4AP68366 448 aa21.72■■□□□ 1.07
SMARCD2-201ENST00000225742 KRT80Q6KB66 452 aa21.72■■□□□ 1.07
SMARCD2-201ENST00000225742 PROSER1Q86XN7 944 aa21.72■■□□□ 1.07
SMARCD2-201ENST00000225742 GALNT13Q8IUC8 556 aa21.72■■□□□ 1.07
SMARCD2-201ENST00000225742 GRIN3AQ8TCU5 1115 aa21.72■■□□□ 1.07
SMARCD2-201ENST00000225742 TFAP2CQ92754 450 aa21.72■■□□□ 1.07
SMARCD2-201ENST00000225742 KCTD14Q9BQ13 255 aaPredicted RBP21.72■■□□□ 1.07
SMARCD2-201ENST00000225742 GPR63Q9BZJ6 419 aa21.72■■□□□ 1.07
SMARCD2-201ENST00000225742 GRIP2Q9C0E4 1043 aa21.72■■□□□ 1.07
SMARCD2-201ENST00000225742 RNF38Q9H0F5 515 aa21.72■■□□□ 1.07
SMARCD2-201ENST00000225742 ALG2Q9H553 416 aa21.72■■□□□ 1.07
SMARCD2-201ENST00000225742 DUS2Q9NX74 493 aaKnown RBP21.72■■□□□ 1.07
SMARCD2-201ENST00000225742 ST14Q9Y5Y6 855 aa21.72■■□□□ 1.07
SMARCD2-201ENST00000225742 ASPDHA6ND91 283 aa21.71■■□□□ 1.07
SMARCD2-201ENST00000225742 SYNCRIPO60506 623 aaKnown RBP21.71■■□□□ 1.07
SMARCD2-201ENST00000225742 SNAP91O60641 907 aa21.71■■□□□ 1.07
SMARCD2-201ENST00000225742 GNRH1P01148 92 aa21.71■■□□□ 1.07
SMARCD2-201ENST00000225742 IRF1P10914 325 aa21.71■■□□□ 1.07
SMARCD2-201ENST00000225742 ATP6V1B1P15313 513 aa21.71■■□□□ 1.07
SMARCD2-201ENST00000225742 ZNF7P17097 686 aaPredicted RBP21.71■■□□□ 1.07
SMARCD2-201ENST00000225742 RPL17P18621 184 aaKnown RBP21.71■■□□□ 1.07
SMARCD2-201ENST00000225742 HTR1EP28566 365 aa21.71■■□□□ 1.07
SMARCD2-201ENST00000225742 UFM1P61960 85 aa21.71■■□□□ 1.07
SMARCD2-201ENST00000225742 EMX2Q04743 252 aa21.71■■□□□ 1.07
SMARCD2-201ENST00000225742 LIPEQ05469 1076 aa21.71■■□□□ 1.07
SMARCD2-201ENST00000225742 NOGQ13253 232 aa21.71■■□□□ 1.07
SMARCD2-201ENST00000225742 VEPH1Q14D04 833 aa21.71■■□□□ 1.07
SMARCD2-201ENST00000225742 FXNQ16595 210 aa21.71■■□□□ 1.07
SMARCD2-201ENST00000225742 C11orf91Q3C1V1 193 aa21.71■■□□□ 1.07
SMARCD2-201ENST00000225742 ARMC12Q5T9G4 340 aa21.71■■□□□ 1.07
SMARCD2-201ENST00000225742 LYPLAL1Q5VWZ2 237 aa21.71■■□□□ 1.07
SMARCD2-201ENST00000225742 KIAA1841Q6NSI8 718 aa21.71■■□□□ 1.07
SMARCD2-201ENST00000225742 FRA10AC1Q70Z53 315 aa21.71■■□□□ 1.07
SMARCD2-201ENST00000225742 ZFAND4Q86XD8 727 aa21.71■■□□□ 1.07
SMARCD2-201ENST00000225742 CARNMT1Q8N4J0 409 aa21.71■■□□□ 1.07
SMARCD2-201ENST00000225742 OR2T11Q8NH01 316 aa21.71■■□□□ 1.07
SMARCD2-201ENST00000225742 PLEKHG4BQ96PX9 1271 aa21.71■■□□□ 1.07
SMARCD2-201ENST00000225742 FEM1AQ9BSK4 669 aa21.71■■□□□ 1.07
SMARCD2-201ENST00000225742 AURKCQ9UQB9 309 aa21.71■■□□□ 1.07
SMARCD2-201ENST00000225742 OR51B4Q9Y5P0 310 aa21.71■■□□□ 1.07
SMARCD2-201ENST00000225742 RAD51BO15315 384 aa21.71■■□□□ 1.07
SMARCD2-201ENST00000225742 TBL1XO60907 577 aa21.71■■□□□ 1.07
SMARCD2-201ENST00000225742 INHAP05111 366 aa21.71■■□□□ 1.07
SMARCD2-201ENST00000225742 ENO2P09104 434 aaPredicted RBP21.71■■□□□ 1.07
SMARCD2-201ENST00000225742 ZNF23P17027 643 aa21.71■■□□□ 1.07
SMARCD2-201ENST00000225742 ERVPABLB-1P60509 514 aa21.71■■□□□ 1.07
SMARCD2-201ENST00000225742 TWF1Q12792 350 aa21.71■■□□□ 1.07
SMARCD2-201ENST00000225742 PRKG2Q13237 762 aa21.71■■□□□ 1.07
SMARCD2-201ENST00000225742 ATP6AP1Q15904 470 aa21.71■■□□□ 1.07
SMARCD2-201ENST00000225742 TCTN1Q2MV58 587 aa21.71■■□□□ 1.07
SMARCD2-201ENST00000225742 LARP7Q4G0J3 582 aaKnown RBP eCLIP21.71■■□□□ 1.07
SMARCD2-201ENST00000225742 TMTC4Q5T4D3 741 aa21.71■■□□□ 1.07
SMARCD2-201ENST00000225742 LINGO4Q6UY18 593 aa21.71■■□□□ 1.07
SMARCD2-201ENST00000225742 SPRED1Q7Z699 444 aa21.71■■□□□ 1.07
SMARCD2-201ENST00000225742 TBC1D21Q8IYX1 336 aa21.71■■□□□ 1.07
SMARCD2-201ENST00000225742 MYO1HQ8N1T3 1032 aa21.71■■□□□ 1.07
SMARCD2-201ENST00000225742 MYO19Q96H55 970 aa21.71■■□□□ 1.07
SMARCD2-201ENST00000225742 CLSTN3Q9BQT9 956 aa21.71■■□□□ 1.07
SMARCD2-201ENST00000225742 DNMT3BQ9UBC3 853 aaKnown RBP21.71■■□□□ 1.07
SMARCD2-201ENST00000225742 EGFL7Q9UHF1 273 aa21.71■■□□□ 1.07
SMARCD2-201ENST00000225742 SLC8A2Q9UPR5 921 aa21.71■■□□□ 1.07
SMARCD2-201ENST00000225742 YIPF1Q9Y548 306 aa21.71■■□□□ 1.07
SMARCD2-201ENST00000225742 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP21.7■■□□□ 1.06
SMARCD2-201ENST00000225742 ARNTLO00327 626 aa21.7■■□□□ 1.06
SMARCD2-201ENST00000225742 SOCS2O14508 198 aa21.7■■□□□ 1.06
SMARCD2-201ENST00000225742 BAIAP3O94812 1187 aa21.7■■□□□ 1.06
SMARCD2-201ENST00000225742 PGLSO95336 258 aa21.7■■□□□ 1.06
SMARCD2-201ENST00000225742 CKMT2P17540 419 aa21.7■■□□□ 1.06
SMARCD2-201ENST00000225742 MSH3P20585 1137 aa21.7■■□□□ 1.06
SMARCD2-201ENST00000225742 RGS4P49798 205 aa21.7■■□□□ 1.06
SMARCD2-201ENST00000225742 SMU1Q2TAY7 513 aa21.7■■□□□ 1.06
SMARCD2-201ENST00000225742 MYLK3Q32MK0 819 aa21.7■■□□□ 1.06
SMARCD2-201ENST00000225742 FBXO48Q5FWF7 155 aa21.7■■□□□ 1.06
SMARCD2-201ENST00000225742 RNF165Q6ZSG1 346 aa21.7■■□□□ 1.06
SMARCD2-201ENST00000225742 CDYL2Q8N8U2 506 aa21.7■■□□□ 1.06
SMARCD2-201ENST00000225742 DCAF4L2Q8NA75 395 aa21.7■■□□□ 1.06
SMARCD2-201ENST00000225742 FNDC5Q8NAU1 212 aa21.7■■□□□ 1.06
SMARCD2-201ENST00000225742 PDPRQ8NCN5 879 aa21.7■■□□□ 1.06
SMARCD2-201ENST00000225742 CD99L2Q8TCZ2 262 aa21.7■■□□□ 1.06
SMARCD2-201ENST00000225742 RMND5BQ96G75 393 aaPredicted RBP21.7■■□□□ 1.06
SMARCD2-201ENST00000225742 IGSF21Q96ID5 467 aa21.7■■□□□ 1.06
SMARCD2-201ENST00000225742 CFHR5Q9BXR6 569 aa21.7■■□□□ 1.06
SMARCD2-201ENST00000225742 CLPBQ9H078 707 aa21.7■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms