RNA–Protein interactions for RNA: ENST00000639659.1

SYNE2-228, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best) BASIC

Gene SYNE2, Length 1,290 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-228ENST00000639659 ARL4DP49703 201 aa14.76□□□□□ -0.05
SYNE2-228ENST00000639659 CCL11P51671 97 aa14.76□□□□□ -0.05
SYNE2-228ENST00000639659 RPL26P61254 145 aaKnown RBP14.76□□□□□ -0.05
SYNE2-228ENST00000639659 PPP1CAP62136 330 aa14.76□□□□□ -0.05
SYNE2-228ENST00000639659 SEMA5AQ13591 1074 aa14.76□□□□□ -0.05
SYNE2-228ENST00000639659 PCSK7Q16549 785 aa14.76□□□□□ -0.05
SYNE2-228ENST00000639659 FAM199XQ6PEV8 388 aaPredicted RBP14.76□□□□□ -0.05
SYNE2-228ENST00000639659 PRSS42Q7Z5A4 293 aa14.76□□□□□ -0.05
SYNE2-228ENST00000639659 ADGRG6Q86SQ4 1221 aa14.76□□□□□ -0.05
SYNE2-228ENST00000639659 LRRTM4Q86VH4 590 aa14.76□□□□□ -0.05
SYNE2-228ENST00000639659 LRRC49Q8IUZ0 686 aa14.76□□□□□ -0.05
SYNE2-228ENST00000639659 GALNT11Q8NCW6 608 aa14.76□□□□□ -0.05
SYNE2-228ENST00000639659 GPR26Q8NDV2 337 aa14.76□□□□□ -0.05
SYNE2-228ENST00000639659 GDAP1Q8TB36 358 aa14.76□□□□□ -0.05
SYNE2-228ENST00000639659 MAML1Q92585 1016 aa14.76□□□□□ -0.05
SYNE2-228ENST00000639659 ZDHHC12Q96GR4 267 aa14.76□□□□□ -0.05
SYNE2-228ENST00000639659 NUP85Q9BW27 656 aa14.76□□□□□ -0.05
SYNE2-228ENST00000639659 CEP41Q9BYV8 373 aa14.76□□□□□ -0.05
SYNE2-228ENST00000639659 BRD8Q9H0E9 1235 aa14.76□□□□□ -0.05
SYNE2-228ENST00000639659 UCK1Q9HA47 277 aa14.76□□□□□ -0.05
SYNE2-228ENST00000639659 ZFYVE1Q9HBF4 777 aa14.76□□□□□ -0.05
SYNE2-228ENST00000639659 TRIM39Q9HCM9 518 aa14.76□□□□□ -0.05
SYNE2-228ENST00000639659 ACSS2Q9NR19 701 aa14.76□□□□□ -0.05
SYNE2-228ENST00000639659 POT1Q9NUX5 634 aa14.76□□□□□ -0.05
SYNE2-228ENST00000639659 IP6K2Q9UHH9 426 aa14.76□□□□□ -0.05
SYNE2-228ENST00000639659 RPL26L1Q9UNX3 145 aaKnown RBP14.76□□□□□ -0.05
SYNE2-228ENST00000639659 ANKRD66B4E2M5 251 aa14.75□□□□□ -0.05
SYNE2-228ENST00000639659 KMOO15229 486 aa14.75□□□□□ -0.05
SYNE2-228ENST00000639659 TOX3O15405 576 aaPredicted RBP14.75□□□□□ -0.05
SYNE2-228ENST00000639659 SEMA7AO75326 666 aa14.75□□□□□ -0.05
SYNE2-228ENST00000639659 RNF224P0DH78 156 aa14.75□□□□□ -0.05
SYNE2-228ENST00000639659 FGF5P12034 268 aa14.75□□□□□ -0.05
SYNE2-228ENST00000639659 DPYSL3Q14195 570 aa14.75□□□□□ -0.05
SYNE2-228ENST00000639659 PLCL1Q15111 1095 aa14.75□□□□□ -0.05
SYNE2-228ENST00000639659 HADHQ16836 314 aaKnown RBP14.75□□□□□ -0.05
SYNE2-228ENST00000639659 LARP7Q4G0J3 582 aaKnown RBP eCLIP14.75□□□□□ -0.05
SYNE2-228ENST00000639659 ATP13A4Q4VNC1 1196 aa14.75□□□□□ -0.05
SYNE2-228ENST00000639659 PRR30Q53SZ7 412 aaPredicted RBP14.75□□□□□ -0.05
SYNE2-228ENST00000639659 ALG1LQ6GMV1 187 aa14.75□□□□□ -0.05
SYNE2-228ENST00000639659 CYB5D1Q6P9G0 228 aa14.75□□□□□ -0.05
SYNE2-228ENST00000639659 TRAPPC5Q8IUR0 188 aa14.75□□□□□ -0.05
SYNE2-228ENST00000639659 KCTD6Q8NC69 237 aa14.75□□□□□ -0.05
SYNE2-228ENST00000639659 GLYATL1Q969I3 302 aa14.75□□□□□ -0.05
SYNE2-228ENST00000639659 LYSMD1Q96S90 227 aa14.75□□□□□ -0.05
SYNE2-228ENST00000639659 ADGRE3Q9BY15 652 aa14.75□□□□□ -0.05
SYNE2-228ENST00000639659 MFRPQ9BY79 579 aa14.75□□□□□ -0.05
SYNE2-228ENST00000639659 GPR63Q9BZJ6 419 aa14.75□□□□□ -0.05
SYNE2-228ENST00000639659 THAP2Q9H0W7 228 aa14.75□□□□□ -0.05
SYNE2-228ENST00000639659 ADGRG1Q9Y653 693 aa14.75□□□□□ -0.05
SYNE2-228ENST00000639659 RGSL1A5PLK6 1076 aa14.74□□□□□ -0.05
SYNE2-228ENST00000639659 LRRC10BA6NIK2 292 aa14.74□□□□□ -0.05
SYNE2-228ENST00000639659 C21orf140B9A014 251 aa14.74□□□□□ -0.05
SYNE2-228ENST00000639659 KCNK1O00180 336 aa14.74□□□□□ -0.05
SYNE2-228ENST00000639659 JCHAINP01591 159 aa14.74□□□□□ -0.05
SYNE2-228ENST00000639659 EBLN1P0CF75 366 aa14.74□□□□□ -0.05
SYNE2-228ENST00000639659 BRAFP15056 766 aa14.74□□□□□ -0.05
SYNE2-228ENST00000639659 FOLR1P15328 257 aa14.74□□□□□ -0.05
SYNE2-228ENST00000639659 NELFEP18615 380 aaKnown RBP14.74□□□□□ -0.05
SYNE2-228ENST00000639659 IDSP22304 550 aa14.74□□□□□ -0.05
SYNE2-228ENST00000639659 CCNCP24863 283 aa14.74□□□□□ -0.05
SYNE2-228ENST00000639659 CLCNKAP51800 687 aa14.74□□□□□ -0.05
SYNE2-228ENST00000639659 RPS15P62841 145 aaKnown RBP14.74□□□□□ -0.05
SYNE2-228ENST00000639659 GBE1Q04446 702 aa14.74□□□□□ -0.05
SYNE2-228ENST00000639659 GTF2H3Q13889 308 aa14.74□□□□□ -0.05
SYNE2-228ENST00000639659 PAFAH1B3Q15102 231 aaKnown RBP14.74□□□□□ -0.05
SYNE2-228ENST00000639659 PWWP2BQ6NUJ5 590 aa14.74□□□□□ -0.05
SYNE2-228ENST00000639659 CPNE8Q86YQ8 564 aa14.74□□□□□ -0.05
SYNE2-228ENST00000639659 APLFQ8IW19 511 aaPredicted RBP14.74□□□□□ -0.05
SYNE2-228ENST00000639659 MR1Q95460 341 aa14.74□□□□□ -0.05
SYNE2-228ENST00000639659 ZNF830Q96NB3 372 aaPredicted RBP14.74□□□□□ -0.05
SYNE2-228ENST00000639659 ZSCAN5AQ9BUG6 496 aa14.74□□□□□ -0.05
SYNE2-228ENST00000639659 HSD3B7Q9H2F3 369 aa14.74□□□□□ -0.05
SYNE2-228ENST00000639659 AKIRIN1Q9H9L7 192 aaPredicted RBP14.74□□□□□ -0.05
SYNE2-228ENST00000639659 LMBRD1Q9NUN5 540 aa14.74□□□□□ -0.05
SYNE2-228ENST00000639659 ZNF711Q9Y462 761 aa14.74□□□□□ -0.05
SYNE2-228ENST00000639659 PCDHGA6Q9Y5G7 932 aa14.74□□□□□ -0.05
SYNE2-228ENST00000639659 MYO9AB2RTY4 2548 aa14.74□□□□□ -0.05
SYNE2-228ENST00000639659 RP1L1Q8IWN7 2480 aaPredicted RBP14.74□□□□□ -0.05
SYNE2-228ENST00000639659 IGHV5-51A0A0C4DH38 117 aa14.73□□□□□ -0.05
SYNE2-228ENST00000639659 CDK14O94921 469 aa14.73□□□□□ -0.05
SYNE2-228ENST00000639659 MMP2P08253 660 aa14.73□□□□□ -0.05
SYNE2-228ENST00000639659 VCLP18206 1134 aa14.73□□□□□ -0.05
SYNE2-228ENST00000639659 PRKCIP41743 596 aa14.73□□□□□ -0.05
SYNE2-228ENST00000639659 HALP42357 657 aa14.73□□□□□ -0.05
SYNE2-228ENST00000639659 PDE1BQ01064 536 aa14.73□□□□□ -0.05
SYNE2-228ENST00000639659 IL10RAQ13651 578 aa14.73□□□□□ -0.05
SYNE2-228ENST00000639659 FILIP1LQ4L180 1135 aa14.73□□□□□ -0.05
SYNE2-228ENST00000639659 KHDC1Q4VXA5 237 aaKnown RBP14.73□□□□□ -0.05
SYNE2-228ENST00000639659 CERS6Q6ZMG9 384 aa14.73□□□□□ -0.05
SYNE2-228ENST00000639659 RAVER1Q8IY67 606 aaKnown RBP14.73□□□□□ -0.05
SYNE2-228ENST00000639659 TRAM1L1Q8N609 369 aa14.73□□□□□ -0.05
SYNE2-228ENST00000639659 GPR150Q8NGU9 434 aa14.73□□□□□ -0.05
SYNE2-228ENST00000639659 KLHL6Q8WZ60 621 aa14.73□□□□□ -0.05
SYNE2-228ENST00000639659 EID2BQ96D98 161 aa14.73□□□□□ -0.05
SYNE2-228ENST00000639659 TIMM29Q9BSF4 260 aa14.73□□□□□ -0.05
SYNE2-228ENST00000639659 ISCUQ9H1K1 167 aa14.73□□□□□ -0.05
SYNE2-228ENST00000639659 BPIFA1Q9NP55 256 aa14.73□□□□□ -0.05
SYNE2-228ENST00000639659 SLC40A1Q9NP59 571 aa14.73□□□□□ -0.05
SYNE2-228ENST00000639659 RTN4Q9NQC3 1192 aaKnown RBP14.73□□□□□ -0.05
SYNE2-228ENST00000639659 AIPL1Q9NZN9 384 aa14.73□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms