RNA–Protein interactions for RNA: ENST00000621093.4

POLR2J3-221, Transcript of RNA polymerase II subunit J3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene POLR2J3, Length 348 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-221ENST00000621093 ELF4Q99607 663 aaPredicted RBP10.8□□□□□ -0.68
POLR2J3-221ENST00000621093 COPS8Q99627 209 aa10.8□□□□□ -0.68
POLR2J3-221ENST00000621093 PHACTR1Q9C0D0 580 aa10.8□□□□□ -0.68
POLR2J3-221ENST00000621093 TMEM168Q9H0V1 697 aa10.8□□□□□ -0.68
POLR2J3-221ENST00000621093 CARS2Q9HA77 564 aaKnown RBP10.8□□□□□ -0.68
POLR2J3-221ENST00000621093 FBXO6Q9NRD1 293 aaPredicted RBP10.8□□□□□ -0.68
POLR2J3-221ENST00000621093 UCKL1Q9NWZ5 548 aa10.8□□□□□ -0.68
POLR2J3-221ENST00000621093 ZNHIT2Q9UHR6 403 aa10.8□□□□□ -0.68
POLR2J3-221ENST00000621093 ST14Q9Y5Y6 855 aa10.8□□□□□ -0.68
POLR2J3-221ENST00000621093 BPTFQ12830 3046 aa10.79□□□□□ -0.68
POLR2J3-221ENST00000621093 IGLV3-16A0A075B6K0 115 aa10.79□□□□□ -0.68
POLR2J3-221ENST00000621093 A0A1B0GTQ1 180 aa10.79□□□□□ -0.68
POLR2J3-221ENST00000621093 CXorf49A8MYA2 514 aaPredicted RBP10.79□□□□□ -0.68
POLR2J3-221ENST00000621093 CDX4O14627 284 aaPredicted RBP10.79□□□□□ -0.68
POLR2J3-221ENST00000621093 TNFRSF10CO14798 259 aa10.79□□□□□ -0.68
POLR2J3-221ENST00000621093 GRID2O43424 1007 aa10.79□□□□□ -0.68
POLR2J3-221ENST00000621093 VEGFDO43915 354 aa10.79□□□□□ -0.68
POLR2J3-221ENST00000621093 GDF9O60383 454 aa10.79□□□□□ -0.68
POLR2J3-221ENST00000621093 LRP3O75074 770 aa10.79□□□□□ -0.68
POLR2J3-221ENST00000621093 S1PR4O95977 384 aa10.79□□□□□ -0.68
POLR2J3-221ENST00000621093 TNFP01375 233 aa10.79□□□□□ -0.68
POLR2J3-221ENST00000621093 C1QAP02745 245 aa10.79□□□□□ -0.68
POLR2J3-221ENST00000621093 CSF2P04141 144 aa10.79□□□□□ -0.68
POLR2J3-221ENST00000621093 IVLP07476 585 aa10.79□□□□□ -0.68
POLR2J3-221ENST00000621093 SYPP08247 313 aa10.79□□□□□ -0.68
POLR2J3-221ENST00000621093 NME1P15531 152 aaKnown RBP10.79□□□□□ -0.68
POLR2J3-221ENST00000621093 KELP23276 732 aa10.79□□□□□ -0.68
POLR2J3-221ENST00000621093 PBLDP30039 288 aaPredicted RBP10.79□□□□□ -0.68
POLR2J3-221ENST00000621093 ABCG1P45844 678 aa10.79□□□□□ -0.68
POLR2J3-221ENST00000621093 HK3P52790 923 aa10.79□□□□□ -0.68
POLR2J3-221ENST00000621093 EFTUD2Q15029 972 aaKnown RBP eCLIP10.79□□□□□ -0.68
POLR2J3-221ENST00000621093 PYCR3Q53H96 274 aa10.79□□□□□ -0.68
POLR2J3-221ENST00000621093 TMEM220Q6QAJ8 160 aa10.79□□□□□ -0.68
POLR2J3-221ENST00000621093 C3orf62Q6ZUJ4 267 aa10.79□□□□□ -0.68
POLR2J3-221ENST00000621093 GATAD2AQ86YP4 633 aa10.79□□□□□ -0.68
POLR2J3-221ENST00000621093 CILP2Q8IUL8 1156 aa10.79□□□□□ -0.68
POLR2J3-221ENST00000621093 ZNF547Q8IVP9 402 aa10.79□□□□□ -0.68
POLR2J3-221ENST00000621093 GPR161Q8N6U8 529 aaKnown RBP10.79□□□□□ -0.68
POLR2J3-221ENST00000621093 GPR150Q8NGU9 434 aa10.79□□□□□ -0.68
POLR2J3-221ENST00000621093 UHMK1Q8TAS1 419 aaKnown RBP10.79□□□□□ -0.68
POLR2J3-221ENST00000621093 TBRG4Q969Z0 631 aaKnown RBP eCLIP10.79□□□□□ -0.68
POLR2J3-221ENST00000621093 SCARF2Q96GP6 870 aaPredicted RBP10.79□□□□□ -0.68
POLR2J3-221ENST00000621093 LRRC61Q9BV99 259 aa10.79□□□□□ -0.68
POLR2J3-221ENST00000621093 PARD6BQ9BYG5 372 aa10.79□□□□□ -0.68
POLR2J3-221ENST00000621093 TXLNGYQ9BZA5 131 aa10.79□□□□□ -0.68
POLR2J3-221ENST00000621093 CLPBQ9H078 707 aa10.79□□□□□ -0.68
POLR2J3-221ENST00000621093 VPS37BQ9H9H4 285 aa10.79□□□□□ -0.68
POLR2J3-221ENST00000621093 ERVMER34-1Q9H9K5 563 aa10.79□□□□□ -0.68
POLR2J3-221ENST00000621093 PPANQ9NQ55 473 aaKnown RBP10.79□□□□□ -0.68
POLR2J3-221ENST00000621093 MOCS1Q9NZB8 636 aa10.79□□□□□ -0.68
POLR2J3-221ENST00000621093 VPS18Q9P253 973 aa10.79□□□□□ -0.68
POLR2J3-221ENST00000621093 SLC23A2Q9UGH3 650 aa10.79□□□□□ -0.68
POLR2J3-221ENST00000621093 APOBEC3BQ9UH17 382 aaKnown RBP10.79□□□□□ -0.68
POLR2J3-221ENST00000621093 GPSM3Q9Y4H4 160 aa10.79□□□□□ -0.68
POLR2J3-221ENST00000621093 TCRBV9S1A1TA0A576 114 aa10.78□□□□□ -0.68
POLR2J3-221ENST00000621093 UBA6A0AVT1 1052 aaPredicted RBP10.78□□□□□ -0.68
POLR2J3-221ENST00000621093 IQCF5A8MTL0 148 aa10.78□□□□□ -0.68
POLR2J3-221ENST00000621093 CHUKO15111 745 aa10.78□□□□□ -0.68
POLR2J3-221ENST00000621093 GFRA3O60609 400 aa10.78□□□□□ -0.68
POLR2J3-221ENST00000621093 NDUFS3O75489 264 aa10.78□□□□□ -0.68
POLR2J3-221ENST00000621093 PIAS2O75928 621 aa10.78□□□□□ -0.68
POLR2J3-221ENST00000621093 HAUS5O94927 633 aa10.78□□□□□ -0.68
POLR2J3-221ENST00000621093 ACSL3O95573 720 aa10.78□□□□□ -0.68
POLR2J3-221ENST00000621093 ATP1B2P14415 290 aaPredicted RBP10.78□□□□□ -0.68
POLR2J3-221ENST00000621093 ITGB6P18564 788 aa10.78□□□□□ -0.68
POLR2J3-221ENST00000621093 OGNP20774 298 aaKnown RBP10.78□□□□□ -0.68
POLR2J3-221ENST00000621093 AK4P27144 223 aaPredicted RBP10.78□□□□□ -0.68
POLR2J3-221ENST00000621093 GABRB3P28472 473 aa10.78□□□□□ -0.68
POLR2J3-221ENST00000621093 PMLP29590 882 aa10.78□□□□□ -0.68
POLR2J3-221ENST00000621093 RXRGP48443 463 aa10.78□□□□□ -0.68
POLR2J3-221ENST00000621093 TUBB4BP68371 445 aa10.78□□□□□ -0.68
POLR2J3-221ENST00000621093 MGAT5Q09328 741 aa10.78□□□□□ -0.68
POLR2J3-221ENST00000621093 GTF2H3Q13889 308 aa10.78□□□□□ -0.68
POLR2J3-221ENST00000621093 FRG1Q14331 258 aaKnown RBP10.78□□□□□ -0.68
POLR2J3-221ENST00000621093 ITIH4Q14624 930 aa10.78□□□□□ -0.68
POLR2J3-221ENST00000621093 TYSND1Q2T9J0 566 aa10.78□□□□□ -0.68
POLR2J3-221ENST00000621093 AASDHQ4L235 1098 aaPredicted RBP10.78□□□□□ -0.68
POLR2J3-221ENST00000621093 PRRT3Q5FWE3 981 aa10.78□□□□□ -0.68
POLR2J3-221ENST00000621093 TEDDM1Q5T9Z0 273 aa10.78□□□□□ -0.68
POLR2J3-221ENST00000621093 LYPLAL1Q5VWZ2 237 aa10.78□□□□□ -0.68
POLR2J3-221ENST00000621093 MRNIPQ6NTE8 343 aa10.78□□□□□ -0.68
POLR2J3-221ENST00000621093 CNSTQ6PJW8 725 aa10.78□□□□□ -0.68
POLR2J3-221ENST00000621093 CERS6Q6ZMG9 384 aa10.78□□□□□ -0.68
POLR2J3-221ENST00000621093 CHST15Q7LFX5 561 aaPredicted RBP10.78□□□□□ -0.68
POLR2J3-221ENST00000621093 KANSL1Q7Z3B3 1105 aa10.78□□□□□ -0.68
POLR2J3-221ENST00000621093 NRROSQ86YC3 692 aa10.78□□□□□ -0.68
POLR2J3-221ENST00000621093 GALNT13Q8IUC8 556 aa10.78□□□□□ -0.68
POLR2J3-221ENST00000621093 TRAPPC5Q8IUR0 188 aa10.78□□□□□ -0.68
POLR2J3-221ENST00000621093 RELL1Q8IUW5 271 aa10.78□□□□□ -0.68
POLR2J3-221ENST00000621093 C2CD4AQ8NCU7 369 aaPredicted RBP10.78□□□□□ -0.68
POLR2J3-221ENST00000621093 LKAAEAR1Q8TD35 194 aa10.78□□□□□ -0.68
POLR2J3-221ENST00000621093 LMX1AQ8TE12 382 aa10.78□□□□□ -0.68
POLR2J3-221ENST00000621093 FBF1Q8TES7 1133 aa10.78□□□□□ -0.68
POLR2J3-221ENST00000621093 LPGAT1Q92604 370 aa10.78□□□□□ -0.68
POLR2J3-221ENST00000621093 DCUN1D1Q96GG9 259 aa10.78□□□□□ -0.68
POLR2J3-221ENST00000621093 TTC25Q96NG3 672 aa10.78□□□□□ -0.68
POLR2J3-221ENST00000621093 OR2M4Q96R27 311 aa10.78□□□□□ -0.68
POLR2J3-221ENST00000621093 FAM167BQ9BTA0 163 aa10.78□□□□□ -0.68
POLR2J3-221ENST00000621093 EDEM2Q9BV94 578 aa10.78□□□□□ -0.68
POLR2J3-221ENST00000621093 SLC13A1Q9BZW2 595 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms