RNA–Protein interactions for RNA: ENST00000620502.4

BRCC3-209, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene BRCC3, Length 882 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-209ENST00000620502 SPINT3P49223 89 aa6.48□□□□□ -1.37
BRCC3-209ENST00000620502 HK3P52790 923 aa6.48□□□□□ -1.37
BRCC3-209ENST00000620502 SRP54P61011 504 aaKnown RBP6.48□□□□□ -1.37
BRCC3-209ENST00000620502 HNRNPKP61978 463 aaKnown RBP eCLIP6.48□□□□□ -1.37
BRCC3-209ENST00000620502 PPARDQ03181 441 aa6.48□□□□□ -1.37
BRCC3-209ENST00000620502 OLIG2Q13516 323 aa6.48□□□□□ -1.37
BRCC3-209ENST00000620502 C1orf61Q13536 156 aa6.48□□□□□ -1.37
BRCC3-209ENST00000620502 SLC1A5Q15758 541 aa6.48□□□□□ -1.37
BRCC3-209ENST00000620502 PARP6Q2NL67 630 aa6.48□□□□□ -1.37
BRCC3-209ENST00000620502 HENMT1Q5T8I9 393 aaKnown RBP6.48□□□□□ -1.37
BRCC3-209ENST00000620502 SEL1L2Q5TEA6 688 aa6.48□□□□□ -1.37
BRCC3-209ENST00000620502 FAXCQ5TGI0 409 aa6.48□□□□□ -1.37
BRCC3-209ENST00000620502 KCTD11Q693B1 232 aa6.48□□□□□ -1.37
BRCC3-209ENST00000620502 ITPRIPL1Q6GPH6 555 aa6.48□□□□□ -1.37
BRCC3-209ENST00000620502 DENND5AQ6IQ26 1287 aa6.48□□□□□ -1.37
BRCC3-209ENST00000620502 CCDC70Q6NSX1 233 aa6.48□□□□□ -1.37
BRCC3-209ENST00000620502 HEATR4Q86WZ0 1026 aa6.48□□□□□ -1.37
BRCC3-209ENST00000620502 TTC30BQ8N4P2 665 aa6.48□□□□□ -1.37
BRCC3-209ENST00000620502 SLC25A41Q8N5S1 370 aa6.48□□□□□ -1.37
BRCC3-209ENST00000620502 PNPLA1Q8N8W4 532 aa6.48□□□□□ -1.37
BRCC3-209ENST00000620502 FAM71DQ8N9W8 422 aa6.48□□□□□ -1.37
BRCC3-209ENST00000620502 GPR26Q8NDV2 337 aa6.48□□□□□ -1.37
BRCC3-209ENST00000620502 ZNF548Q8NEK5 533 aaPredicted RBP6.48□□□□□ -1.37
BRCC3-209ENST00000620502 IPMKQ8NFU5 416 aa6.48□□□□□ -1.37
BRCC3-209ENST00000620502 OR56A4Q8NGH8 313 aa6.48□□□□□ -1.37
BRCC3-209ENST00000620502 OR4C6Q8NH72 309 aa6.48□□□□□ -1.37
BRCC3-209ENST00000620502 LMX1AQ8TE12 382 aa6.48□□□□□ -1.37
BRCC3-209ENST00000620502 BTN2A2Q8WVV5 523 aa6.48□□□□□ -1.37
BRCC3-209ENST00000620502 C1orf54Q8WWF1 131 aa6.48□□□□□ -1.37
BRCC3-209ENST00000620502 OR1E3Q8WZA6 343 aa6.48□□□□□ -1.37
BRCC3-209ENST00000620502 ANP32BQ92688 251 aaKnown RBP6.48□□□□□ -1.37
BRCC3-209ENST00000620502 AP2M1Q96CW1 435 aa6.48□□□□□ -1.37
BRCC3-209ENST00000620502 RTP4Q96DX8 246 aa6.48□□□□□ -1.37
BRCC3-209ENST00000620502 TBATAQ96M53 351 aa6.48□□□□□ -1.37
BRCC3-209ENST00000620502 WDR92Q96MX6 357 aa6.48□□□□□ -1.37
BRCC3-209ENST00000620502 CDC6Q99741 560 aa6.48□□□□□ -1.37
BRCC3-209ENST00000620502 FERMT1Q9BQL6 677 aa6.48□□□□□ -1.37
BRCC3-209ENST00000620502 LRRC61Q9BV99 259 aa6.48□□□□□ -1.37
BRCC3-209ENST00000620502 RIOK2Q9BVS4 552 aaKnown RBP6.48□□□□□ -1.37
BRCC3-209ENST00000620502 FRMD8P1Q9BZ68 369 aaPredicted RBP6.48□□□□□ -1.37
BRCC3-209ENST00000620502 FAM83DQ9H4H8 585 aa6.48□□□□□ -1.37
BRCC3-209ENST00000620502 ACSS3Q9H6R3 686 aa6.48□□□□□ -1.37
BRCC3-209ENST00000620502 FGF22Q9HCT0 170 aa6.48□□□□□ -1.37
BRCC3-209ENST00000620502 MRPL40Q9NQ50 206 aaKnown RBP6.48□□□□□ -1.37
BRCC3-209ENST00000620502 TRMT1Q9NXH9 659 aaKnown RBP6.48□□□□□ -1.37
BRCC3-209ENST00000620502 NLGN3Q9NZ94 848 aa6.48□□□□□ -1.37
BRCC3-209ENST00000620502 CNOT6Q9ULM6 557 aaKnown RBP6.48□□□□□ -1.37
BRCC3-209ENST00000620502 RNF112Q9ULX5 631 aa6.48□□□□□ -1.37
BRCC3-209ENST00000620502 SHOC2Q9UQ13 582 aa6.48□□□□□ -1.37
BRCC3-209ENST00000620502 ZNF711Q9Y462 761 aa6.48□□□□□ -1.37
BRCC3-209ENST00000620502 JRKLQ9Y4A0 524 aa6.48□□□□□ -1.37
BRCC3-209ENST00000620502 CSNK1G3Q9Y6M4 447 aa6.48□□□□□ -1.37
BRCC3-209ENST00000620502 DGKBQ9Y6T7 804 aa6.48□□□□□ -1.37
BRCC3-209ENST00000620502 U3KQA8 63 aa6.48□□□□□ -1.37
BRCC3-209ENST00000620502 PCNX2A6NKB5 2137 aa6.47□□□□□ -1.37
BRCC3-209ENST00000620502 LAMA1P25391 3075 aa6.47□□□□□ -1.37
BRCC3-209ENST00000620502 FAM95CA0A1B0GW59 222 aa6.47□□□□□ -1.37
BRCC3-209ENST00000620502 NEMP2A6NFY4 417 aa6.47□□□□□ -1.37
BRCC3-209ENST00000620502 FADS2P1A8MWK0 482 aa6.47□□□□□ -1.37
BRCC3-209ENST00000620502 TPP1O14773 563 aa6.47□□□□□ -1.37
BRCC3-209ENST00000620502 TNFRSF10CO14798 259 aa6.47□□□□□ -1.37
BRCC3-209ENST00000620502 YY2O15391 372 aa6.47□□□□□ -1.37
BRCC3-209ENST00000620502 FFAR2O15552 330 aa6.47□□□□□ -1.37
BRCC3-209ENST00000620502 CEP104O60308 925 aa6.47□□□□□ -1.37
BRCC3-209ENST00000620502 ZNF189O75820 626 aaPredicted RBP6.47□□□□□ -1.37
BRCC3-209ENST00000620502 STK10O94804 968 aaKnown RBP6.47□□□□□ -1.37
BRCC3-209ENST00000620502 RASGRP1O95267 797 aa6.47□□□□□ -1.37
BRCC3-209ENST00000620502 TNFP01375 233 aa6.47□□□□□ -1.37
BRCC3-209ENST00000620502 FGGP02679 453 aa6.47□□□□□ -1.37
BRCC3-209ENST00000620502 ATP1A1P05023 1023 aaKnown RBP6.47□□□□□ -1.37
BRCC3-209ENST00000620502 MYF5P13349 255 aa6.47□□□□□ -1.37
BRCC3-209ENST00000620502 BPIP17213 487 aa6.47□□□□□ -1.37
BRCC3-209ENST00000620502 CKMT2P17540 419 aa6.47□□□□□ -1.37
BRCC3-209ENST00000620502 HLA-DPA1P20036 260 aa6.47□□□□□ -1.37
BRCC3-209ENST00000620502 STIP1P31948 543 aaKnown RBP6.47□□□□□ -1.37
BRCC3-209ENST00000620502 HMGCLP35914 325 aa6.47□□□□□ -1.37
BRCC3-209ENST00000620502 GPR1P46091 355 aa6.47□□□□□ -1.37
BRCC3-209ENST00000620502 POLD2P49005 469 aa6.47□□□□□ -1.37
BRCC3-209ENST00000620502 GEMP55040 296 aa6.47□□□□□ -1.37
BRCC3-209ENST00000620502 CDK3Q00526 305 aa6.47□□□□□ -1.37
BRCC3-209ENST00000620502 ID3Q02535 119 aa6.47□□□□□ -1.37
BRCC3-209ENST00000620502 DNAJC3Q13217 504 aa6.47□□□□□ -1.37
BRCC3-209ENST00000620502 SNX1Q13596 522 aa6.47□□□□□ -1.37
BRCC3-209ENST00000620502 SPARCL1Q14515 664 aa6.47□□□□□ -1.37
BRCC3-209ENST00000620502 PRPSAP1Q14558 356 aa6.47□□□□□ -1.37
BRCC3-209ENST00000620502 CCNG2Q16589 344 aa6.47□□□□□ -1.37
BRCC3-209ENST00000620502 DEFB133Q30KQ1 61 aa6.47□□□□□ -1.37
BRCC3-209ENST00000620502 P3H1Q32P28 736 aa6.47□□□□□ -1.37
BRCC3-209ENST00000620502 INAVAQ3KP66 663 aa6.47□□□□□ -1.37
BRCC3-209ENST00000620502 ZNF569Q5MCW4 686 aa6.47□□□□□ -1.37
BRCC3-209ENST00000620502 RAET1GQ6H3X3 334 aa6.47□□□□□ -1.37
BRCC3-209ENST00000620502 DRICH1Q6PGQ1 229 aaPredicted RBP6.47□□□□□ -1.37
BRCC3-209ENST00000620502 RD3Q7Z3Z2 195 aa6.47□□□□□ -1.37
BRCC3-209ENST00000620502 PRUNE1Q86TP1 453 aa6.47□□□□□ -1.37
BRCC3-209ENST00000620502 HID1Q8IV36 788 aa6.47□□□□□ -1.37
BRCC3-209ENST00000620502 SLC35F6Q8N357 371 aa6.47□□□□□ -1.37
BRCC3-209ENST00000620502 RASGEF1CQ8N431 466 aa6.47□□□□□ -1.37
BRCC3-209ENST00000620502 FAM181AQ8N9Y4 354 aa6.47□□□□□ -1.37
BRCC3-209ENST00000620502 GLIS1Q8NBF1 620 aa6.47□□□□□ -1.37
BRCC3-209ENST00000620502 ATL2Q8NHH9 583 aa6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms